Labeo rohita (rohu): 127163857
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Entry
127163857 CDS
T09007
Symbol
tbc1d22a
Name
(RefSeq) TBC1 domain family member 22A isoform X1
KO
K20360
TBC1 domain family member 2
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127163857 (tbc1d22a)
Membrane trafficking [BR:
lroh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
127163857 (tbc1d22a)
Retrieval pathways
127163857 (tbc1d22a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
ECM10
CDC45
Motif
Other DBs
NCBI-GeneID:
127163857
NCBI-ProteinID:
XP_050963284
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All DBs
Position
4:complement(23094655..23248469)
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AA seq
548 aa
AA seq
DB search
MSGDGNKKQFWKRNTAKVPGNIQHVYGAQHPPFDPLLHANLMKAGNKPLSTTTPGKPKKA
TTFQEFESITSDAWDVGDDDDELLAMAAQNLNIEVVMETANKVIENHSKLQERRQQQMDK
MTEPDEKDGQEVHEEEEEEPDEEDEREEGAETTTDLSFSSEALPLSDNRLVKSQSEAPVG
SPKEVGVEQAVLHRQQSLPHRPVIPLVARMADQNTSGTPAMTEREASRLDKFRQVLAGPN
TDLEELRKLSWSGIPRQVRPITWKLLSGYLPANAERRESTLQRKRQEYFGFIEQYYDSRN
DEHHQDTYRQIHIDIPRTNPLIPLFQQASVQEIFERILFIWAIRHPASGYVQGINDLVTP
FFVVYVFEYIEEEVENFNVSSLQEEVLRNIEADSFWCMSKLLDGIQDNYTFAQPGIQRKV
KALEELVSRIDETVHRHMQQYEVEYLQFAFRWMNNLLMRELPLRCTIRLWDTYQAEPEGF
SHFHLYVCAAFLVRWRKEILEEKDFQGLMILLQNLPTMHWGNEEVSVLLAEAYRLKFAFA
DAPNHYKR
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtgacggcaacaaaaaacaattctggaagagaaacacagccaaggttcctggg
aatatccagcatgtttatggagcccagcatcccccatttgaccctttgctacatgccaat
ctaatgaaagcaggaaacaagcctctgtctaccactacgccaggaaaaccaaagaaagcc
accaccttccaagagttcgagagcatcaccagcgatgcctgggatgtgggagacgatgat
gatgagcttctcgctatggcagcccaaaatctcaacattgaggtcgtcatggagacagcc
aataaggtgatagaaaaccacagcaagctgcaggaaagaagacagcagcaaatggacaag
atgactgagcctgacgaaaaagatggacaggaggtgcacgaggaagaggaggaagaacca
gatgaagaggatgagagagaggaaggggcagagacgacaacagatctgtcgttcagttca
gaggctcttccacttagtgacaacagacttgtgaagtcacagagtgaagctcctgtcggc
tcgcctaaagaagtgggcgttgaacaggcagtactacacagacagcagtcactcccacac
aggcctgtgattccactggtggcccgcatggcagatcagaacacatcaggaactcctgcc
atgaccgagagagaggcgtcaagacttgacaaattcagacaggttctggccgggcctaat
actgatctggaggagcttcggaagttgagctggtctggaattccacggcaggtgcgccca
atcacatggaagctgctctcagggtacctgcctgccaatgcagagcgaagagaaagcacg
ttgcagaggaagcggcaggaatactttggctttattgagcagtactacgactctcgtaat
gacgaacaccatcaggacacatacagacagattcacattgacataccgagaactaatcct
cttatacctctctttcaacaagcttctgtgcaagagatctttgagcggatattgttcatc
tgggcaatacggcatccagcaagtggctacgtacagggcatcaacgaccttgtcacaccc
ttcttcgttgtttatgttttcgagtatattgaggaagaggtggaaaatttcaatgtttcc
agcttgcaggaagaggtgttgcggaacatcgaggctgacagcttctggtgcatgagcaag
ctcctggacgggattcaggacaactacaccttcgcccagcctgggatccagaggaaagtg
aaggcactagaggagctggtcagtcggattgatgagacggtacatcgccacatgcagcag
tatgaggtggagtatttgcagttcgcctttcgctggatgaacaacctgcttatgagagaa
cttcctctacgctgcaccattcgcctgtgggacacttatcaggcagagcccgaaggattc
tctcatttccatttgtacgtgtgtgctgccttcctggtgcgatggaggaaagagatacta
gaggagaaagatttccagggtctgatgattctgctccagaatctacccacaatgcactgg
ggaaatgaggaagttagcgttctcctagctgaagcttaccggctgaagtttgcctttgcc
gacgcccctaaccattacaaaagatga
DBGET
integrated database retrieval system
