Labeo rohita (rohu): 127163915
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Entry
127163915 CDS
T09007
Symbol
taf3
Name
(RefSeq) transcription initiation factor TFIID subunit 3
KO
K14650
transcription initiation factor TFIID subunit 3
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127163915 (taf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lroh03021
]
127163915 (taf3)
Transcription machinery [BR:
lroh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127163915 (taf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromo_TP
PHD
PHD_5
PHD_2
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
127163915
NCBI-ProteinID:
XP_050963390
LinkDB
All DBs
Position
4:24976635..25037911
Genome browser
AA seq
913 aa
AA seq
DB search
MCESYARSLLRVSVAQVCQAVGWDAVQLSACDLLSDVLERYLQQLARSCHRYSELYGRTD
PGLSDVDQAFGLLGVSIAELEDYVNNMEPVGFPQTIPQFPISKSSVLQFPAAGFETDARE
ALRGERRDYIPEYFPPLVSLQEDEEEEEPVPADMGTSAEAMQVSLGEEEEGEEEENDENW
LSRHGGQSPRPEGLLPAAKRPRLSTKPGVSPEWSYEPREPLSSLNSQHMPHSPSPPLSPE
LPRPPLAPPTPGHKPKLPSPSPARQKSKSPKRGGGSAPTGVLGRPLMLTPPKTNQKAGKR
SPGRPKSPRSPRPSPAHLGAAGRGWPGPLGDDNSRDGQFRAHDTGDEDIENSIAAVIARA
CADGDGASDPFAYDSDSDSEGPNPPKPAPKHTLSHIKPPQVLTGKHPLPPVPPNLNPPNR
WTMDDSIDEVIRKANQAPKPIQAPSLSPPEPTYLSSPPDSPPTPLPPLKPPQERKDPATA
TLLKKKLKKDIKAKLKKKDKERLKEKGKEKGKNKEKNKEKKREKERGQVEENKMPWPELS
LGVGGEERRDGISGKKEKDKHKDKKKDKEKSKKEKEKRDKGKERGKEEKRISQGTKDIAA
AVGATSPLFSPQTCLRIPSMLPPLPPILPDKLFPHPKDTKSKDKDKKKDKKEKKKKKEKE
KDREKEREKEREKERAREKERDKEEKKKDKEKKEKTKEKEKDKPKLEKSSLLADILPAVP
PSPVIPRLTLRVGAGQDKIVISKVVPDSEPTPPPPRTPVARPSPAARMRSPPAPPPPAPA
PVAPPPRPPPVLPPPPPVAPIQPPPSQAKARGCSVVTETVSAYVIRDEWGNQIWICPGCN
KPDDGSPMIGCDECDDWYHWPCVGLVAAPPEDQSWFCVKCAGKKKDKKTKKGNAKRTDPH
FFFSRLRLHLLSP
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgagagttacgcacgctcgctgctgcgggtgtccgtggcgcaggtgtgtcaggcg
gtgggctgggatgcggtgcagctgagcgcctgtgatctgctgtccgatgtgctggagaga
tacttgcagcagctggcccggagctgccaccgatactccgagctctatggacgtacagac
cctggactgagtgatgtggaccaggcttttggacttttgggagtcagtatagctgaactc
gaggactatgtaaataacatggagcctgttggcttcccacaaactatccctcagtttccc
atcagcaagagcagcgttctgcagtttcctgctgctggctttgaaacggacgcccgtgaa
gctctgaggggagagaggagagactatatcccggagtacttccctccgctcgtctcactg
caggaagatgaggaagaggaggagccggttcctgcagatatgggcacttctgccgaggcc
atgcaggtctccctgggtgaggaagaagaaggcgaggaggaagagaatgatgagaactgg
cttagtcggcatggtggacagagtcccagacctgagggtctgttacctgccgccaagaga
ccccgcctgagcaccaaacccggcgttagccccgaatggagttacgagccacgggaacct
ctcagttccctcaactcccaacacatgcctcattccccctcccctccactctcccccgaa
ttaccccgacctcctttggcacctcctacacctgggcacaagccgaaactgccctcgccc
tctcctgcacggcagaagagcaaatcacccaaaagaggtggtggttctgcacccactggt
gtattggggcgaccacttatgttgaccccacccaagaccaatcagaaggcaggaaagagg
tcacccggtaggcccaaaagcccccgcagcccaaggccaagccctgcacatttgggtgca
gctggacgtggttggcctggacctcttggagatgataattctcgtgatgggcagttcaga
gctcatgatacaggagacgaggatattgagaactctattgctgctgtgattgcacgtgct
tgtgcggatggtgatggcgcctcagacccatttgcttatgactcggactcagacagtgag
gggccaaaccctccaaaacctgcacccaaacatacacttagccacatcaaacctccacaa
gttcttaccggaaaacacccacttccacctgttccaccaaatctcaacccacccaaccgc
tggacgatggatgactctatagacgaggtcatccgaaaggccaatcaggctccaaagcca
attcaagccccaagtctttcacctccagaacccacgtacctgtcgtccccacccgactcg
cctcccacaccgctgccacctctcaaacctcctcaggaacgaaaggaccctgctaccgct
acccttctgaagaaaaaactcaagaaggacatcaaggccaagttgaagaagaaagacaag
gagcgactcaaggagaaaggcaaagagaaaggaaagaacaaggagaagaacaaggagaag
aaacgggaaaaggagcgagggcaggtagaggagaacaagatgccctggccggagctatcg
ctcggagtcggaggtgaagagcggagagacggcattagcgggaagaaagagaaggacaag
cacaaggacaagaagaaagataaagagaaaagcaagaaagaaaaagagaagcgagacaag
ggcaaagagcgaggcaaggaggagaagagaatatctcaaggaaccaaagacattgccgct
gccgtcggcgccaccagcccactcttcagcccccagacctgcctacgaatcccgtcaatg
ttgcccccattgccaccaatactccctgataagttgttcccgcaccccaaggataccaag
agcaaagacaaggacaagaagaaggacaagaaagagaagaagaagaaaaaagagaaggag
aaagaccgggagaaggagcgtgaaaaggaacgggagaaggaacgggcaagggagaaggaa
cgagataaagaggagaagaagaaggacaaagagaagaaagaaaagacgaaggaaaaggag
aaagacaagccaaaacttgagaaatcaagtttattggctgatattcttcctgctgtccca
ccgtctcctgtcatacctcgactgaccctcagagtgggtgctggacaagacaagattgtg
attagtaaggtggtcccagattcagaacccacccctccaccaccacggaccccagtggcc
aggcccagtccagcagcacggatgcgttcccctccagctccccctccacctgccccggct
cctgtagcacctccaccccgccctcctcctgtcctgccccctccacccccagtcgccccc
attcagccgccacccagtcaggccaaagcacggggatgcagcgttgtcacggagaccgtc
agtgcatacgtgattcgggatgaatggggtaatcagatctggatctgcccgggatgtaat
aaacctgatgacggcagtcccatgatcggatgcgacgagtgtgacgactggtatcactgg
ccctgtgtgggtcttgtagccgcccctccggaggaccagtcgtggttctgtgtgaaatgc
gctggcaagaagaaagacaagaagacaaaaaaaggaaacgcaaagcgcactgacccacat
ttctttttctcccgtctccgtcttcatctgttgtcgccttaa
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