Labeo rohita (rohu): 127163960
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Entry
127163960 CDS
T09007
Symbol
xpot
Name
(RefSeq) exportin-T isoform X1
KO
K14288
exportin-T
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127163960 (xpot)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lroh03016
]
127163960 (xpot)
Transfer RNA biogenesis [BR:
lroh03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
127163960 (xpot)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exportin-T
Xpo1
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
127163960
NCBI-ProteinID:
XP_050963509
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All DBs
Position
4:complement(45557271..45569753)
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AA seq
971 aa
AA seq
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MACESALPAIMDEQALMGLNPNADACYRQRALAYFEQLKESLDGWEVCAEALAKGVYSDD
HVKFFCFQVLEHQIKFRHGSRTAAQQQLIRETLMKWLQAQLMNVHPEKPFIRNKAAQVLA
LTFVMEYLTLWPKFFFDILNLVGLNPNGVDIYLRTLMAIDAEVVDRDILHSPEETRRNTL
IKDSMREQCIPALVESWYQILQTYQHTHSELTCQCLEVVGAYVSWIDLNLIANDRFVNLL
LSHMSMEELREEACDCLFEIVNKGMDPVDKTKLVESLCQVLQSAGFFNIEQEEDVDFLAK
FSRLVNGMGQSLVLSWTKLSKMGDVKVSADTLRAVEAKVPLMLQLLIHEDDDISANIVGF
CYDYLHVLKQLPALNEQQKSNVEAIMLAVMNKLKYDDEYNFENEGEDEAMFVEYRKQLKM
LLDRLAQVSPELLLEAVHRVFNATMQNWQTVQFMEVEVAIRLLYMLGEALPASHGAHFSG
DTTKTSTLQAMMRTLISCGVSEYQHSSVTLEFFETVVRYDKFFLVEPQHIPSVLMAFLDH
RGLRHSSPKVRSRVAYLFSRFIKTLHKHMNAFIEDILSRIQDLLELAPPENGFPALLSSD
DQLFMFETAGVLIVNGESPAERKQALMRSLLTPLMEAFRMLLAKLPQEADEERQTALADC
LSHAVGFASRTSKAFSNKQTVKQCGCSEVYLDCLQTFLPALSCPVQRGPLRSAVRSFLHR
MIICLEEEVLPFIPAASQHMLKDCEPKDLQEFIPLISQITAKFKNQVSPFLQEIFMPLVI
AIFETLSRPAEENDQTAALEKQMLRRSYFSFIQTIASSGMNEVMASQEAENIERVLFTII
QGAVDFPDPIAQKTCFIILSRLVELWGGKDGLVGFPDFIYKHIVPACFMAPLKPTFDLSD
AQTVLTLSECTLTLHMIHLKRGPECIQFLQEYLPSLQVSPEITQELCQVLQQPDVKVLKN
YMKVFFQQAKL
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggcctgcgagtcggcgttacctgccatcatggacgagcaggccctcatgggactgaac
cccaacgctgatgcctgctacaggcagagggcgctggcatattttgagcaattgaaagag
tctttagatggatgggaggtatgcgctgaagccctggctaaaggagtttacagtgacgat
catgtcaagttcttctgctttcaagtcttggagcaccagatcaaattcaggcacggctca
cgtactgcagctcaacagcagctgatccgtgagacactgatgaaatggttgcaggctcag
ttgatgaatgtgcatccagaaaagcccttcatcaggaataaggcggcgcaggttttggcc
ctgacgtttgtgatggagtatctgactttgtggcccaagttcttctttgacatcctcaat
ctggtgggactgaatccaaacggtgtggacatttacctgcgcacgctgatggctattgat
gctgaggtggttgatcgggacatcctgcacagtcctgaggagacacgcagaaatactctg
atcaaagactccatgcgcgagcagtgcatcccggcactggttgagtcatggtaccagatc
ctacagacgtaccagcacacccacagtgagctgacctgccagtgtctggaggtggtgggc
gcgtacgtgtcctggatcgacctcaacctcatcgccaatgacaggtttgtgaatctgttg
ctcagccacatgtccatggaggagttgcgtgaggaggcgtgcgattgtctgtttgagatc
gtcaataagggcatggatcctgttgacaaaaccaaactggtggagtctctgtgtcaggtg
ctgcagtccgcagggttcttcaatatcgagcaggaggaggatgtggattttctggccaag
ttctctcgattggttaacgggatgggtcagtctctggtgctgagctggactaaactcagt
aagatgggagatgtgaaggtttcagcggatacgttgcgtgctgtagaggcaaaggttccc
ctgatgctacagctgctaattcatgaagacgacgatatttcagccaacatcgtgggcttt
tgctatgactacctgcatgttctgaaacagcttccagctctcaatgagcagcagaaaagc
aatgtagaggcgatcatgctggctgtgatgaacaagctaaagtacgatgacgagtataat
tttgagaatgagggcgaggatgaggccatgtttgttgaatacagaaaacagttaaagatg
ttgcttgaccgactggctcaagtctctcctgagcttctgctggaagctgtgcacagagtc
ttcaatgccaccatgcagaactggcagacggtgcagttcatggaggtggaggtggccatc
aggctgctgtatatgttgggtgaagctcttcctgcatctcacggagcacatttctctgga
gacaccacgaaaaccagcacactgcaggccatgatgagaacactgatctcatgtggcgta
agtgagtatcagcactcctctgtgactctggagttctttgagaccgtcgtccgttatgat
aaattcttccttgtggagccgcagcacattcccagtgtcttgatggcgtttttagaccat
cgtggtctgaggcacagcagtccaaaggtgcgcagtcgagtggcttacctgttctcacgc
ttcatcaaaaccctgcataaacacatgaatgcattcatcgaggacatactcagcagaata
caggacctgttagagctcgctcccccggagaatggttttccggcgctgctgagcagtgat
gatcagctgttcatgtttgagactgccggcgtgttgatcgtgaatggagagagtccagcc
gagcgtaagcaggctctgatgcgcagcctcctgacaccgctaatggaggcgtttcgcatg
ctcctcgcaaaactgccacaggaggcagatgaagagagacagacggcgctggccgattgt
ctgagtcacgctgtggggttcgccagtcgcaccagtaaggcgttcagtaacaagcagaca
gtgaagcagtgtggctgctctgaagtgtatctggactgcctgcagaccttcctgccagcg
ctcagctgtcccgtccagcgagggccgctgcgcagtgcagtgcgctccttcctccaccgc
atgatcatctgtctagaggaggaggtgcttcccttcattccagcggcatcgcagcacatg
ctgaaggactgcgagcccaaagacctgcaagagttcatcccgctcatcagtcagatcacc
gccaagtttaagaaccaggtgtctcctttcctccaggagatcttcatgcctctagtgata
gccatattcgagacgctgtcgcgtccagcagaggagaacgatcagacggctgctttagag
aagcagatgttgagaagaagctacttcagtttcattcagaccatcgccagcagcggcatg
aacgaggtcatggccagtcaggaagctgaaaatatcgagcgtgtgctgttcaccatcatc
cagggagctgtggatttcccagaccccatcgcccagaaaacctgcttcattatcctgtcc
agattggtggaactctggggtggaaaagatggtttggtgggatttccagattttatttat
aagcatatcgtcccagcatgcttcatggcccctcttaaaccaacctttgacctttcagat
gcccagactgttctgacgctgtctgagtgtacgctgactctgcacatgattcatctcaaa
agaggcccggagtgtattcagtttcttcaggagtacctgccatcactgcaagtctcacct
gaaatcacacaggagctgtgtcaagtccttcagcagccggatgttaaggttctgaaaaac
tacatgaaggttttcttccagcaggccaaactttaa
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