Labeo rohita (rohu): 127163976
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Entry
127163976 CDS
T09007
Symbol
cand1
Name
(RefSeq) cullin-associated NEDD8-dissociated protein 1
KO
K17263
cullin-associated NEDD8-dissociated protein 1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127163976 (cand1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127163976 (cand1)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
127163976 (cand1)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127163976 (cand1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP120
HEAT_EF3_N
HEAT_EZ
HEAT_2
HEAT
TOR1L1_N
UME
MMS19_C
Adaptin_N
Cnd1
Vac14_Fab1_bd
CLASP_N
INTS7_N
mTOR_dom
RIX1
ARM_ARMC5
HEAT_DAAF5
Tti2
VHS
Dcc1
Vps35
Motif
Other DBs
NCBI-GeneID:
127163976
NCBI-ProteinID:
XP_050963533
LinkDB
All DBs
Position
4:complement(35124017..35139176)
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AA seq
1230 aa
AA seq
DB search
MASASYHISNLLEKMTSSDKDFRFMATNDLMSELQKDSIKLDDDSERKVVKMILKLLEDK
NGEVQNLAVKCLGPLVSKVKEYQVETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPA
SSGSALAASVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLCRQGGLLVNFHPSILSCL
LPQLTSPRLAVRKRTIIALGHLVMSCGNLVFVDLIEHLLSELSRNESMSTTRTYIQCIAA
ISRQAGHRIGEYLEKIIPLVVKFCNVDDDELREYCIQAFESFVRRCPKEVYPHVPTVISI
CLKYLTYDPNYNYDDEDEDENAMDADGVDEDYQGSDDEYSDDDDMSWKVRRAAAKCLDAV
VSTRHEMLPEFYRTVSPALIARFKEREENVKADVFHAYLSLLKQTRPAQSWLCDPDAMEQ
GETPLTMLQSQVSMIVKALHKQMKEKSVKTRQCCFNMLTELVNVLPGALTQHIPVLIPGI
IFSLNDKSSSSNLKIDALSCLYVILCNHQPQVFHPHVQAIVPPVVACVGDPFYKITSEAL
LVTQQLVKVIRPLDQTDAFDASPYIADLFACTIKRLKAADIDQEVKERAISCMGQIICNL
GDSLGADLPGTLHIFLERLKNEITRLTTVKALTLIAGSPLKINLRPILGEAVPILASFLR
KNQRALKLSTLAALDILVKNYSDSVTPAMIDAVLAELPPLINESDMHVSQMAISFLTTLA
RVHPDSLSKISGSILAELIALVRSPLLQGGALSAMLEFFQALVATGTASLGYMDLLRMLT
GPVYAQSAALTHKQSYYSIAKCVAALTRACPKEGPAVVGQFIQDVKNSRSTDSIRLLALL
SLGEVGHHVDLSGQPELKTVILDAFSSASEEVKSAASYALGSISVGNLPEYLPFVLQEIS
GQPKRQYLLLHSLKEIISSASVAGLKPYVENVWALLLKHCECTEEGTRNVVAECLGKLTL
IDPETLLPRLKGYLLSGSSYARSSVVTAVKFTISDHPQTIDPLLKNCIGDFLKTLEDPDL
NVRRVALVTFNSAAHNKPSLIRDLLDTVLPHLYNETKVRKDLIREVEMGPFKHTVDDGLD
IRKAAFECMYTLLDSCLDRLDIFEFLNHVEDGLKDHYDIKMLTFLMLARLSSLCPSAVLQ
RLDRLVEPLRATCTTKVKANSVKQEFEKQDELKRSAMRAVVALLTIPEAEKSPLMSEFQS
QISSNPELAAIFDSIQRDSSSANMESMDTS
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgcctcgtaccacatctctaatcttttggagaaaatgacatccagcgacaag
gatttcagattcatggccaccaatgatttgatgtccgaactgcagaaggattcgataaag
ttggatgatgatagtgaacggaaagtggtcaaaatgatcttgaagctcctggaggacaag
aatggcgaagttcagaatctggctgtaaaatgtttgggcccacttgtcagcaaagtgaag
gagtaccaggtcgaaaccattgttgatacattgtgtacaaacatgttatcagataaggag
cagcttcgagatatttccagcatcggcctcaagacagtgattggagagctcccgccagca
tccagtggctctgctcttgctgctagcgtttgcaaaaagattacaggccgcctcacaagt
gccattgccaagcaggaggacgtctcagttcagctggaagcgttggacatcatggcagac
atgctgtgcagacaaggaggtctcttagtgaatttccacccttccattctgagctgtctg
ctgcctcaattgacgagccctcgcctggcagtgagaaagaggaccatcatagccctggga
catctggtcatgagctgcggaaacctggtctttgtggacctcatcgagcacttattatcc
gagctctcacgcaacgagtccatgtcaaccacgcgcacttacatccagtgtattgctgcc
atcagcagacaagctggccacagaatcggtgagtacttagagaagatcatcccgttggtg
gtgaagttctgcaatgttgatgacgatgaactgagggaatattgtatacaagctttcgag
tcttttgtaaggaggtgtccgaaagaagtctacccacatgtcccaacagtcattagcatc
tgtcttaagtatctgacctacgaccccaactacaactatgacgacgaggatgaagatgaa
aacgcaatggatgccgacggtgtagacgaagattatcaagggagtgatgacgagtacagc
gatgatgacgacatgagttggaaagtgaggagagcggcagcaaagtgcttggatgccgtg
gtgagcacacgacatgagatgttaccggagttctaccgcactgtttctccagcgctcatt
gcccgttttaaagagcgggaagaaaacgtcaaggcggatgtctttcatgcctacctgtcc
ttgctcaagcaaacacgccctgcccagagctggctctgtgacccggatgccatggaacag
ggagaaactcctcttacaatgcttcaaagtcaggtgtcaatgatagtaaaagcactgcat
aaacagatgaaagagaaaagtgttaagacccggcagtgctgcttcaacatgctgacagaa
ctagtaaacgtgctgccaggggccctgacgcagcatattcctgttctcatcccaggaatc
atattttctctcaacgataaatcaagctcttcaaatctgaagatagatgccctgtcttgc
ttgtatgtgatcctgtgcaaccatcagcctcaagtcttccacccccatgttcaggctata
gtgcctcctgtagttgcttgtgtgggtgatcccttttataagatcacctctgaagcactg
ctggtcacccagcagttggtcaaagtcattaggcccctggatcaaactgatgcttttgat
gcctcgccctacatcgctgaccttttcgcttgcaccattaaaaggctgaaggcagcagat
atcgaccaggaagtcaaagagcgagctatttcttgtatggggcaaattatctgcaacctt
ggtgatagccttggtgcggatctaccaggcactctccacatcttcctagagcgactaaag
aacgagataacaaggctgaccaccgtcaaagctcttacgctcatcgcagggtcgccgcta
aagatcaacctgaggcccatcttgggtgaggctgttcccattcttgcctccttcctacgt
aagaaccaacgagcgttgaaactaagcacactagctgcactggacattctggtcaagaac
tacagcgatagtgtaacaccggccatgattgatgctgtactggctgagctgccgcctctt
atcaatgaaagcgatatgcatgtctcccagatggctatcagcttcctcaccacgcttgca
cgagtccaccctgactcgctgtctaagataagtggctctattttggctgaactcatagct
ttggttcgctccccgttgctgcaaggtggcgctcttagcgccatgctggaattcttccag
gctcttgtagctacgggaactgccagcttgggctacatggacctgctacgtatgctaaca
ggtcctgtgtatgcccagagtgcagcgctcacccataagcaatcctactactccatcgca
aagtgcgtggccgctctcacccgcgcttgtcctaaagagggccctgcagtggtgggacag
ttcattcaagatgtgaagaactcgcgttccactgactccatcagattgctcgctctgctt
tccctcggagaggtcggacatcacgttgatctgagcggtcagcccgagctgaaaacagtc
attctggatgccttctcctcagccagcgaagaggtcaaatcagcagcttcatacgcgtta
ggtagcatcagcgtggggaacctcccagagtacctgccctttgtcctgcaagagatctct
ggccaacccaagcgacagtacctgctgttgcactctctcaaggaaatcatcagctctgcc
tcggtggcagggcttaaaccatatgtcgaaaacgtgtgggcgctgttgctcaaacactgc
gagtgtacagaagagggcacaaggaatgtggtagctgaatgtctggggaagttaacactc
atcgacccagagactcttctgcccaggctgaaaggctatctcttatcaggatcatcttat
gccaggagctccgtagtcacagctgttaaattcacgatttctgatcacccacagacaatt
gaccctcttcttaaaaactgcataggtgatttcttgaaaacattggaagatccagacctc
aacgtacgaagagtggctctagttacctttaactctgcagctcacaacaaaccctctctt
attcgagacttgttggatacagttctccctcatttgtacaatgagaccaaagtgcgcaag
gatctaatcagagaggttgaaatgggtccgttcaaacacacggtggacgatggtctggac
ataaggaaggctgcatttgaatgcatgtacactctattagacagttgccttgatagactt
gacatctttgaattcttaaaccatgttgaagacggacttaaggaccattacgatatcaag
atgctgacattcctcatgctggccagattatctagcctgtgtcccagtgcagtgttacag
aggttggacagacttgtagagccacttagggcaacatgcaccacaaaggtaaaagccaac
tccgtgaagcaggagtttgagaagcaggacgagctcaaacgatctgctatgcgggctgta
gtggccctgctaaccatcccagaggctgagaagagccccctaatgagtgagttccaatct
cagatcagctccaaccctgagctggctgccatctttgacagcatccagagggactcctcc
agcgccaacatggaatccatggacaccagttaa
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