Labeo rohita (rohu): 127163981
Help
Entry
127163981 CDS
T09007
Symbol
ppfibp1a
Name
(RefSeq) liprin-beta-1 isoform X1
KO
K27096
liprin-beta
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127163981 (ppfibp1a)
Membrane trafficking [BR:
lroh04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
127163981 (ppfibp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
FlaF
DUF16
DUF7691
Motif
Other DBs
NCBI-GeneID:
127163981
NCBI-ProteinID:
XP_050963539
LinkDB
All DBs
Position
4:38570544..38588938
Genome browser
AA seq
894 aa
AA seq
DB search
MMCDASEMLAAALEQMDGIIAGSKAMNYTNGLFDCQSPTSPFLGSLRVLHLLEDLRAALD
LMDPEEKEGLRSQVSETTAEGLMEWLQGRLTNGHGSAAGDLVYQERLSRLESDKECLVLQ
VSVLTDQVEVQGEKIRDLDSSLEEHRMKLNATEELLQQELLSRSALETEKLELLTEVSSL
KLRLAAAEGDCRESEGLYQDVKDMRLQLTSMEDERQEYERSLNSTKVRVPQGQEELLSLQ
KQLEDREQALRRLQDQGMPGVPNTEQSQNREKDMEVQRMRSAVESLKAANEEKDLKIKEL
QQSLIRYRRVQDMVMSVQASKDKPRDDDTREGLCDTEMVSTGGAEETDEPQLIPCSELLP
EVTTHKSAAETTDSVSEVQQPERSCLTSNNEEETSKNGGSPSISPTQASSGGNESFGSKK
MRSSFGRGFFKIRSNKMTSSAPNLVEGERKGTEHLDLAGVQTQKPKALEMFSPEGKKKSK
GIMKLFGRMKRSQSTSDDLDDSPESAFRRGGVRATAGPRLGWSRDPQRSNNNELDSPFSR
WSKEQVCEWLQKQGLDLYVNQAQQCISSGQTLLKASQHDLEKEMGIRHPLHRKKLQLALQ
SLGSEEDDTMGKLDYNWVTRWLDDIGLPQYKSQFDEGRVDGRMLHYMTVDDLLGLKVGSV
LHHLSIKRAIQVLRINRYDPSCLRRRPTENNPTPAEICQWTNHRVMEWLRSVDLAEYAPN
LRGSGVHGGLMVLEPRFNVETMALLLNIPPNKTLLRRHLATHFHVLIGSEAQRLKQEYLE
NPDYTVLTATAKVKPRRLSFGSFGTLRRKRQEEMEEYVCPMDVQMPQNSSFHKGLGIYED
SLNQLEQMEDSEGTVRQIGAFSEGINNLTSMLKEDELFIEASSRSPETSTTDYD
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgatgcaagtgaaatgttggcagctgctctggagcagatggatggcatcatt
gcaggttctaaggctatgaactacacaaatggcctttttgattgccagtcgccaacttca
ccattcctgggcagccttcgggtgctgcacctattggaggacctgagggctgcgttggac
ttgatggatcctgaggaaaaggagggtctgcgcagtcaggtgtccgaaaccacagctgag
ggtctgatggagtggctacaaggccgactgaccaatggccatggatctgcagcaggggat
ttggtctaccaggagcgactctcacgcttggaaagtgacaaagaatgtctagtgctccag
gtaagtgttctgacagaccaggtggaagttcaaggagaaaaaataagggacctagactcg
agccttgaggaacaccgcatgaaactgaatgctacagaagagttactacagcaggagctg
cttagcaggagtgctttagagacggagaaactggaactgctgaccgaggtatcaagtctg
aaactaaggctagctgctgcagaaggggattgcagagaaagtgagggtctttatcaggat
gtgaaggacatgcgccttcagttgacttctatggaggacgagagacaagagtatgagaga
agtcttaactctaccaaagtacgagtgcctcagggtcaggaggagctgttatcactacaa
aagcagttggaggacagagaacaggcacttagaagacttcaggaccagggcatgccagga
gtcccaaacacagaacagtcacaaaacagagagaaagacatggaggtgcagagaatgagg
agtgctgttgagtccttgaaggcagctaatgaagagaaggatttgaagataaaagagctg
caacagtctctgatccgttacaggcgagttcaggatatggtgatgtccgtgcaggcttcg
aaagacaaacccagggatgacgacacaagagaagggctgtgtgacaccgagatggtctcc
acaggaggcgcagaggaaactgatgaacctcagctcattccatgttcagagctgctccct
gaagtgaccacgcacaaatctgcagctgagaccactgacagtgtctctgaagtacagcaa
cctgaaaggtcttgtttgacaagcaataatgaggaggaaaccagtaaaaatggaggctct
ccatccatctctccgactcaggccagctcaggaggcaacgagagttttggctctaaaaaa
atgcgttcctcttttggacgtggctttttcaagatcagaagcaacaagatgacaagcagc
gctccaaatctggttgaaggagagcgcaaggggaccgagcacttggatttggctggagtg
caaactcagaagccgaaagcattggagatgttctcgcctgaagggaagaagaaatcaaag
gggatcatgaagttatttggaaggatgaagagaagtcagtccacctcagatgacctggat
gattctccagagtcagcatttaggagaggaggagtacgagccacggcgggacccagactg
ggctggtctcgagatccacaacgaagcaataacaatgagctggacagcccgttttcacgc
tggagtaaagagcaggtttgcgagtggctgcagaagcagggactggacttgtatgtaaat
caggctcagcagtgtatcagctctggacagacattactgaaggcgtctcagcatgattta
gaaaaggagatgggcatcaggcatcctttacatagaaaaaaactgcagctggctcttcag
tcactgggctcagaggaggacgataccatgggtaaactggactacaactgggttactcga
tggctggatgacatcggcttacctcagtataaatctcagtttgacgagggtagagtggat
ggacgcatgcttcactatatgactgtggatgacctgctgggtctcaaagtgggtagtgtg
cttcaccatctcagcattaagagggccattcaggtgctacgtatcaaccgctatgacccc
agctgcctccgccgccgaccgacagagaataatcccacaccagcggaaatctgtcaatgg
accaatcacagagtgatggagtggcttcgttcagtggatctagcagagtatgcacccaac
ctgagaggaagcggagtccatggaggcctaatggttttagagcctcgcttcaatgttgag
acaatggctctgcttcttaacatcccaccaaataagacgctgttgcgacgccaccttgcg
acacacttccatgttctgatcggctcagaggcacaaaggctgaagcaggagtatctcgaa
aacccagattacacagtcctcacggccacagccaaagttaagccaagacgtctgtctttt
ggaagttttgggacattgagacggaagagacaggaggagatggaagagtatgtttgcccc
atggatgtgcaaatgcctcagaacagcagtttccataaaggccttggcatatatgaagac
agcttgaatcagttggagcagatggaagactctgaaggcacagtgcgacagattggcgcg
ttctcggagggaatcaacaacctgactagcatgctaaaagaggatgaactcttcattgaa
gcgtcctcacgttcacctgaaaccagcaccacagattacgactaa
DBGET
integrated database retrieval system
