Labeo rohita (rohu): 127163997
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Entry
127163997 CDS
T09007
Symbol
lamb1b
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-1b
KO
K05636
laminin, beta 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04510
Focal adhesion
lroh04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127163997 (lamb1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127163997 (lamb1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
LAMININ_IV_B
Laminin_N
Laminin_I
F5_F8_type_C
LMBR1
Motif
Other DBs
NCBI-GeneID:
127163997
NCBI-ProteinID:
XP_050963568
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All DBs
Position
4:complement(24594536..24629610)
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AA seq
1727 aa
AA seq
DB search
MWILQITALTISIAVHTLAQLPDNNDKCAEGSCYPATGDLLIGRAHRLTASSTCGLDGPE
TFCIVSHLQEQENCFECDSRRMYNEFTNPNSHTIENVVTTFTPNRLKTWWQSENGVENVT
IQLDLEAEFHFTHLIMTFKTYRPAAMLIERSADYGHSWQVYRYYAFSCSESYPHVPKGPI
RKVDDVICDSRYSGLEPSTEGEVIFRALDPAFKIPDPYSPRIQNLLKITNLRVRMEKLHT
LGDDLFDDQERVKEKYYYALFDMVVRGNCFCYGHASKCAPVGIEAGVEGMVHGHCVCNHH
TTGLNCEECEDFYQDLPWRPAVGRETNACKKCECNHHSHTCHFDMAVYLSSGNRSGGVCD
DCLHNTEGQWCENCKPFYYKHAGRDIRDPRICEPCDCDPHGSLNGGLCDSATDVLRDMIA
GQCRCKANVEGQRCDHCKKGHYGLSDDPLGCRPCSCNPLGTLPAGSPCDIQTGSCYCKRL
VTGRNCDQCLPQHWGLSNDMDGCRPCDCDIGGALNNNCSRETGQCVCKKHMFGRRCDQVR
SGYYFAALDHYIYEAEDASFGPEVKVVQRPLPLDRKPTWTGKGFVNVPEGETLRFNIYNL
PRSMEYNLMIRYEPLLPDEWEQVVVQIERPGGTYPAAHCTSTYNDEQTTSLHPGSRYAVL
PDPVCLEKGQNYTVTISFSQYSSYSYHSSPHTLVDSIVVLPKVEDLDLFSGGPKQQEDWE
MFQKYRCMERSQSVIKIPLTDICRDYILSVSALMHNGALECKCDPQGSLSTVCDSIGGQC
QCRPNVLGKNCNTCAPATYLFGPSGCRPCDCNPLGSQNLICHPTTGQCLCVPGAYGRQCG
NCKPNHWGFPQCQSCFCNGNSEQCHPLTGECLYCRGHTTGQNCERCESGYYRNTLLGSSE
PCRPCMCPNGPGSGMQFADSCYQNPSSLQMVCVCNSGYKGAKCEECASGYYGNPQVPGGR
CHPCQCNGNINMQDPDSCDPRTGACLKCLFHTDGNACQYCSRGYYGDARTQNCRRCMCHL
VGTSRQSCVDGLCECDRVNGQCPCLPGVVGQNCDRCAPNTWNINSGNGCQPCQCHPEHSY
TSSCDLLTGQCSCKPGFGGRTCEECRELFWGDPEVQCHACDCDPRGTATQQCNKMTGECV
CVEGVAGRRCDSCGRGYVGTFPDCEACHTCFREWDVNVGELNNHTQRLVDTVEEMKETGV
ATPYKDIISNLDDETKQLKQILEDDKVEQTLTHMQRMLQQANETASAMRKSMDRSEKDLE
KVSADHQQAVENLKSLTKEAQNLQEISSDTQQQVLNIKHLDPRGATDSIREYYRESGEAE
FRVNRAVSDPESLVKESAQTRKAAEAKLGSTEKEFNLKHQLHIQRLDKMESELDSADLSR
LSRQVCGGVSGLDGCGDCGGLGCVSEDGTSQCGGERCETIVTRSQEALNKAKNLDQDVLH
ALGEVDKLNKMVSDARGRADEAKLNAQDVLLKANQSKARVEQTNEELRDLIQQIRDFLTN
ETDPKRIEEVANEVMKLSLPVPPGALKNVTAEIREHVARLTQVDDILNQTADNAQTAERL
LQEAQEANERATALKQTTDKVKETLEDTERAQTAAREKIKEAESDLNQTKQQIEDVQSKT
EATEFKLSSSTGRFLELEREVYELQQKTLETSSSADQTQRQTEYITPEIEHTAREIDTLV
QPKLLLASGLIDQKAAGVFDARQKAEQLRQEAKDLLLDATNKLQTKR
NT seq
5184 nt
NT seq
+upstream
nt +downstream
nt
atgtggattctccagattacagctcttaccatatctattgctgtgcacaccctagcacaa
ctacccgataacaatgacaagtgtgcagaggggagctgttaccctgcaacaggtgatttg
ctgatagggagagcacatcggcttacagcctcctccacctgcggactggatggaccagag
acattctgcattgtgagccatttacaggaacaggaaaactgttttgaatgcgattcccga
cggatgtacaatgagttcaccaatcccaacagccacaccattgagaatgttgtgacaacc
ttcactcccaatcgcctcaaaacctggtggcagtccgagaatggagttgaaaatgtgacc
attcaactggatttggaagccgaattccactttacacacctcatcatgacctttaagacc
taccggccggcagccatgctgattgagcgttcggcagattatgggcatagctggcaggtg
taccgttactacgctttcagctgctctgaatcctatccgcacgttcctaaggggccaatc
agaaaagtggatgatgtcatttgtgacagccgctattcaggcttggagccatcaacagaa
ggagaagtcattttcagagcgcttgatcctgcgtttaagattcctgacccttacagccca
cgcattcagaacctactgaagatcaccaacttgcgcgtacggatggaaaagttgcacact
ctaggtgatgatctgtttgatgaccaagagagggtgaaagagaaatactattacgctctc
tttgacatggttgtccgtggcaattgtttctgctatggccacgcctccaagtgtgcacca
gtcggcattgaggcaggggtcgagggcatggttcatggtcactgcgtgtgtaatcaccac
actactggactgaactgtgaagagtgtgaagacttctaccaagatctcccctggagacca
gcagtgggccgagagacaaatgcatgcaagaaatgtgagtgtaaccatcactcgcacacc
tgtcattttgacatggcagtgtatctgtcatcgggaaataggagtggaggagtgtgtgat
gactgtctgcacaacacagagggccaatggtgtgagaactgcaaacccttttactacaag
cacgctggaagagacatcagagaccccaggatctgtgagccctgtgattgtgacccacat
ggttccctgaacggaggcttatgtgacagcgctacggatgttctaagagatatgattgct
ggacagtgtcgttgcaaagctaatgtggagggacaacgttgtgaccactgtaaaaaagga
cactatggcctcagcgatgacccattaggctgtcggccatgcagctgtaatcctctaggc
acactcccagcaggaagtccctgtgatatacagacaggaagctgttactgcaaacgtctt
gtgactggacgaaattgtgatcagtgtctgccacagcactggggtctcagtaatgatatg
gatggctgcagaccatgtgactgtgatataggcggggctttgaataataattgctctcgg
gaaacagggcagtgcgtttgtaagaagcatatgtttggtaggcgttgtgaccaggtgcgt
tctgggtactactttgcggcactggaccactatatttatgaagctgaggatgcttccttt
ggaccggaagtaaaagtggttcagagaccgttacctttggatcgtaaacccacctggacg
ggtaaaggatttgtgaatgtaccagagggtgaaacactgaggttcaacatttacaattta
ccacgatctatggaatacaacttaatgatccgctatgaaccactgttgccagatgaatgg
gagcaggttgtagtacagatagagcggcccggaggcacttacccagcagcacactgcacg
tctacatacaatgatgagcagaccacctcactacaccctggatcaagatatgcagttctg
cctgatccagtgtgtttggagaagggtcaaaattacacagtgacaattagcttctcacag
tactcatcatacagctatcactcttcacctcacacacttgttgattcaatagtggttttg
cccaaggtggaagacctggatctattttctggcggacccaagcagcaggaagactgggag
atgttccagaaatacagatgcatggaacgcagccagagtgttattaaaatccccttaacg
gatatttgcagagattacatcttaagtgtgtcggcactaatgcacaatggagctctggag
tgtaagtgtgacccccaaggttctctgagcacagtgtgtgacagtatcggtgggcagtgc
cagtgtcgaccaaacgttttgggcaagaactgcaacacctgtgccccggccacctacctg
tttggaccctcgggatgtagaccatgtgactgcaaccctttgggctctcagaaccttatc
tgtcaccccaccacgggccagtgtttatgtgtgccaggggcatatgggcgccagtgtggg
aactgtaagcctaaccattggggtttccctcagtgccagtcctgcttttgtaacgggaac
agtgaacagtgccacccactgacaggcgagtgtctgtactgcaggggtcacaccacaggc
caaaactgtgagaggtgtgaaagtggttactaccgcaacacacttctgggctccagtgag
ccgtgccgcccttgtatgtgtcccaatggacctggaagtggaatgcagtttgctgacagc
tgttaccaaaatcccagctctctccaaatggtctgtgtatgcaactcaggctacaaagga
gctaagtgtgaggaatgtgcctctggttactatggtaaccctcaggtaccaggaggacgg
tgccatccttgtcagtgtaacggaaatattaacatgcaggaccctgactcatgtgacccc
cgcactggtgcctgtctcaaatgcctgtttcacaccgatggcaatgcgtgccagtactgc
agtcgtggttattatggagacgctcgtactcagaactgcagaagatgtatgtgtcatctc
gtgggaacctccaggcaaagttgtgttgatggcctttgtgagtgtgacagggttaacggc
cagtgtccatgtctgcccggcgttgtgggtcagaactgtgaccgctgtgcccccaacaca
tggaacatcaacagcggcaatggatgccaaccttgccagtgtcaccccgaacattcttac
acatcctcctgcgacctgctgaccggtcagtgttcctgtaagcctggttttggaggcagg
acatgtgaggagtgcagggaactgttctggggtgatcctgaggtccagtgccacgcatgc
gactgtgacccacgaggcactgccactcaacagtgtaataagatgactggcgagtgtgtg
tgcgtagagggcgtggccgggcgtaggtgtgactcgtgtgggcgtggctacgttgggacc
tttcctgactgtgaggcctgtcatacgtgtttccgtgaatgggatgttaatgtgggagag
ctgaacaatcacacgcagagactggtggatacagtggaggaaatgaaagagacgggcgtg
gctacgccctataaagacatcatatcgaatctggatgatgaaaccaaacagctaaaacag
attctggaagatgacaaggttgagcaaacgctcacacacatgcagaggatgcttcagcaa
gccaatgagacagcatcagccatgagaaagtctatggaccgatctgaaaaagatctggag
aaggtatcagctgaccatcagcaggctgtggagaacctaaaaagcctgactaaggaggcc
caaaacctacaggagatctcctctgacacacagcagcaggtcctgaacatcaaacattta
gaccccagaggtgcgacggacagcatcagggagtattacagggaatcaggtgaggcggag
tttcgtgttaatcgagccgtttctgacccagaaagtttggttaaagagtctgcccagaca
cggaaagctgccgaggccaaactaggcagcacagagaaagaatttaacctgaagcatcag
ctgcatatacagaggctggacaaaatggaatccgaactagactccgcagacctttcacga
ctaagccgtcaggtgtgcggaggggtgtcaggtctagatggttgcggtgactgtggtggt
ctgggatgtgtgagcgaggatggcacgtcccagtgcggtggggaacgatgtgagaccatt
gtgacacgatcccaagaggctttgaacaaagccaaaaacttagaccaagatgtcctgcat
gctttaggagaagtagacaagctaaacaagatggtgtcagatgctcgaggacgtgcagat
gaggccaagctcaatgctcaggatgtgttactgaaagccaatcagagcaaagcacgtgtg
gaacaaaccaatgaggagctcagagacctcattcagcaaatacgagacttcctcacaaat
gaaactgatccaaagcgtatagaggaagtagcaaatgaggtgatgaaactgagtttgcca
gtgccgcccggtgcactaaagaacgtgaccgcggagatccgcgaacatgtggccagactt
acccaggtggatgatattcttaaccaaacagcagacaatgcgcaaactgcagagagactc
ctgcaagaagcacaagaggccaatgagagagctacagcactgaaacagaccaccgataag
gtgaaggaaactctagaggacactgagcgtgctcagaccgctgccagagaaaaaataaaa
gaggctgagagtgacttgaaccaaacaaaacaacaaatcgaagatgtacaatcaaaaacc
gaagcgacggagttcaaactgagtagcagcacaggaagatttctggaacttgaaagagag
gtttacgaactccaacagaaaactctagaaacgtccagcagtgcagatcaaactcagaga
cagactgaatacatcacaccagaaattgagcacacggcacgggagattgacacactcgtg
caacctaagttattactggccagtggtctgatagatcaaaaggcagcaggtgtgtttgat
gcacgtcagaaggccgagcaactacgtcaggaggcaaaagatctattattagatgccaca
aacaagctacagactaagaggtaa
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integrated database retrieval system
