Labeo rohita (rohu): 127164019
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Entry
127164019 CDS
T09007
Symbol
zbed4
Name
(RefSeq) zinc finger BED domain-containing protein 4
KO
K24640
zinc finger BED domain-containing protein 4
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127164019 (zbed4)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
127164019 (zbed4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
zf-C2H2_12
Flu_PB2_4th
ACT_3
Motif
Other DBs
NCBI-GeneID:
127164019
NCBI-ProteinID:
XP_050963607
LinkDB
All DBs
Position
4:complement(22608964..22615280)
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AA seq
1252 aa
AA seq
DB search
MDGEDGLSQKTEDTSHEHNGSKDNKRIEAKGTCLKIEGKDGYVFKSYRVTPQEVLEAEPH
TCPSETLAKDSSLVSLSFEGTEEDGSSEVDGLSTEDSTAESCEKHDSQTSPTISNKSQNI
EINNSEIETSVCIKAEPNETGEIAQDDEKLSFDGTFGPFATRGYDDDYGSLFSGYSSTLY
DVAMDAVTQSLLSSIRSPLNPRKKSPAWNHFFISPRDSTKAICMYCMKEFSRGKNEKDLS
TSCLMRHVRRAHPTVLLQDSDSLNNLSNNSSLIPPNISPNNGDLSVSIKPPTDNHTPLSS
FLAEATDIVSKDSKVKPKAEKGVKSDSSVVPSPHSLNNHNDDATDLGSECSGSAPKSSSS
RRRSAVWKHFYLSPADSSKAVCIHCMNEFSRGKNGKDLGTSCLIRHMWRAHRDIVIEENG
HGSSIPPPYTTPPTLLSRTQDSAEVKKEFLCTSHRSDAISDEVPNDDSEHMTLEDEANDN
TYQSGQESSLDASFRLKGENIPLSSSPEEHTEGLSISQDQSSVFQQNKKIMKRVKSEVWH
HFIVSPVDQLKALCRYCPCVISRGKRGDFGTSCLMRHLMRRHPDVLKTQKSTNDKVHSPQ
SPHCTPAAEDEMTTNEKDSPAAENKHHTLPVFSKKTSKLWNHFSISSADPTKVVCLHCSR
TISRGKKTTNLGTSCLFRHMQRFHGHVLENNSNISGDVSSAEIQVKQELMDISTYEENAE
KFSECHPAAKKITKLIAEMLALDLQPSTVVENVGLNRLLEYLQPQYSLPSSSYFTSTAIP
EMYGSVKEVVLTHLKEAEGGIIHFTTSVWVSSQTQEYLILTAHWVTFESQVLPQGQDFHC
SALLGVSSIDCDYNVLNIQKQLEYLWDTWIGSSGLKIGFTVTDNQTIGSILESSDHTTMQ
CFVHSIDLIVNEAIKSQRMVQNLLSIARKICERVHRSAKAKEKLAELQKAYQLPENQLVQ
DVPSKWKTSYFMLQRLVEQKKAIDEMSIECNFRELISCDQWEVMQSVCNALKPFEVACRE
MSNRTATLGQVIPLIHILNRKIDMLFDETMGIDNMLKSLKEAMVTKMSPTLHDPRYIWAT
MLDPRYKTSLFTEEEAEQCKHDLIQELEVSTSNSAETKPPLSNGCSEIPASSNSLASNKE
NLWALMDDIRQKIRQEERPKSLELAVLEYLEEDILDQSCDPLDYWNLKKLLWPELAKVAV
RYVGCPPSIVPADTLFSTSSVNCALNQSRPLLENLEGLLFLKVNLPLIYFQY
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atggacggagaggacggcctctcacagaagactgaagatacaagccacgagcataatggc
tccaaagataacaagagaatagaggccaaaggaacctgtttaaaaattgaagggaaagat
ggttatgtgtttaagtcatacagagttactcctcaagaggtattggaagcagaaccccat
acttgtccctctgagacactggcaaaagattcctctttggtgtctttgtcatttgagggc
acagaggaagatggatcttctgaggttgacgggctttcaacagaggattcaacagcagaa
agttgtgaaaagcatgattctcaaacatctccaactatttccaataagagccagaacatt
gaaataaataattcagaaattgaaacaagtgtatgtatcaaagcagaaccaaatgaaacg
ggtgaaattgctcaggatgatgaaaagttatcgtttgatgggacctttggaccctttgcc
accagaggttatgatgatgattatggtagcttgttcagtgggtactcaagtactctgtat
gatgttgcaatggatgctgtcacacaaagccttctatcatccataagaagtccccttaac
cctagaaaaaaatcccctgcttggaaccattttttcatatcaccacgtgatagtaccaaa
gcaatctgtatgtactgtatgaaagagttcagccggggtaaaaatgagaaagatctcagt
accagttgtttaatgaggcatgtgcgaagggctcaccccactgttcttctgcaagacagt
gactcattaaataatttgtccaataattcatctttaatacctcccaatatatcaccaaac
aatggagacttgtctgtgagcatcaagccccctacagacaaccatactccattgtcctcc
tttctagctgaggccacagacatagtgtccaaagactcaaaggtcaaaccaaaagcagaa
aagggtgtcaagagtgactctagtgtggttccatccccacattccttaaacaaccataat
gatgatgccacagacttggggagtgaatgctctggatcagcccctaagagctcaagttcc
cggcggcgctcagcagtgtggaaacacttttatttatcccctgctgacagctcgaaagca
gtgtgtattcactgcatgaatgagttcagtcgtggcaaaaatgggaaagacttggggacg
agctgccttattcgccacatgtggcgggctcatcgagacatagtcattgaagaaaatgga
catggctcaagcattcctccgccttacaccactccaccaacattgctctcacgcacacaa
gactctgcagaggtaaaaaaggaattcctctgtacctcccatcgctctgatgccatatca
gacgaagtgcccaatgatgacagtgagcatatgactcttgaggatgaggcaaatgataat
acatatcagtctggacaagagtcctcacttgatgcatcttttagactgaaaggggaaaat
atacctctgtcatcctcaccagaggaacacactgaggggctaagcatatcccaagatcag
agctcagtttttcaacaaaacaagaaaataatgaaacgggtgaaatcagaagtatggcat
catttcatcgtctctcctgttgaccaactcaaagctttgtgtcggtattgtccctgtgtc
ataagccgtggtaaacgaggggactttggcacaagctgtttaatgagacatttgatgcga
cggcatcctgatgttctcaaaacccaaaaaagcacaaatgacaaagttcactcaccacag
tctccccattgtactcctgctgcagaggacgaaatgacaacaaatgaaaaggacagccct
gctgctgagaacaaacaccacaccctgcctgttttcagcaaaaagacttcaaagctatgg
aatcacttttctatttcctctgctgacccaacaaaggtggtctgtttgcactgtagccgc
acaattagcagaggtaaaaagacaaccaatttaggcactagttgcttatttaggcacatg
cagagatttcatgggcatgtgcttgaaaataatagtaatatctcaggtgatgtgtcatct
gctgaaattcaagttaagcaagagctcatggacatttctacttatgaggagaatgcagaa
aagttcagtgaatgccacccagctgccaaaaaaatcaccaaactaattgcagaaatgctt
gcactggatcttcagccatcaactgtagtggaaaatgttggcctgaaccgattactggaa
tacctccagccacagtattctctaccttcttcatcctactttaccagcactgcaatccct
gaaatgtatggaagtgtgaaagaagtagttctgacccaccttaaggaggctgaaggtgga
atcatccatttcacaacaagtgtttgggtgagcagccaaactcaagagtacttgattctt
acagcccactgggtaacgtttgagtctcaagttctgcctcaggggcaagatttccactgc
tcagccctacttggtgtttcgtcaattgactgtgactacaatgtgctgaacatacagaag
cagctcgaatatctttgggacacatggattggttcctcaggccttaaaattggatttacc
gtcacagataatcaaactattggaagcatactagagagcagtgatcacaccaccatgcag
tgttttgttcatagcatagacctcattgttaacgaagccataaaaagtcagaggatggtt
cagaatttgcttagtattgctcgaaaaatctgtgagagagtgcatcgttctgctaaagca
aaggagaagttggcagagctgcaaaaagcttatcagttacctgaaaaccagctggttcag
gatgttccctccaagtggaaaacatcatattttatgcttcagcgattagtagagcaaaag
aaagccattgatgagatgtcaatagagtgcaatttcagggaactgataagctgtgaccag
tgggaagtcatgcagtctgtctgcaatgctcttaagccttttgaggtagcctgccgggag
atgagcaatcgcaccgcaacactaggtcaggtcattccactcattcacatactcaaccga
aaaatagatatgctttttgatgagaccatgggtattgacaatatgctcaagtctttaaag
gaagcaatggtgactaaaatgtcccccacacttcatgaccccaggtacatatgggcaacc
atgctggacccgaggtataagacctccctttttactgaggaagaagcagagcagtgtaag
catgacctcatacaagagctcgaggtgtctacatctaactctgcggagacaaaaccacca
ctgtcaaacggatgcagtgaaataccagcttcatcaaacagcttggcctcaaacaaagaa
aacctctgggctctaatggatgacatcagacagaaaatcaggcaggaagagagaccaaaa
tcattggagcttgcagtgctggagtatttggaggaagacattcttgaccagagttgtgat
cctctggattattggaacctaaagaagttactgtggcctgaacttgccaaagtagctgta
cgctatgtgggttgtccacccagcattgtaccagcagacacgctttttagcacatcaagt
gtcaactgtgccctgaatcagtcccggccattgctagaaaatcttgaaggacttctattt
ttaaaggtcaaccttcctttgatatattttcagtactga
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