Labeo rohita (rohu): 127164036
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Entry
127164036 CDS
T09007
Symbol
nup50
Name
(RefSeq) nuclear pore complex protein Nup50
KO
K14295
nuclear pore complex protein Nup50
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127164036 (nup50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127164036 (nup50)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127164036 (nup50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
127164036
NCBI-ProteinID:
XP_050963638
LinkDB
All DBs
Position
4:22150758..22161221
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AA seq
454 aa
AA seq
DB search
MAKRIAEKELTDRNWDQEDEGEEAGTFSIASEDVMKNRAIKKAKRRNVGAEGESGGAFKA
FKGFSLTPNTGTASFSGFGNGAGFKPLSSLTNGSVAPVAPSFAGFNVPTSAKTNSAPLTF
NSSTPSKPTDDVTSNGSAPSCKEYNRQLTALNCSVRDWITKHVNDNPLCDLNPIFRDYER
HLASIEKKYGSGASDSGAESASFGGEQKQLLKSGTTASVSGTSATVTASVTSAAPQLFSF
KDKDAPTADKPAAVAPPGVSFNFGQKVDSSVLGALTSSGAPSFSFSSSSSSSGVSLFGSA
VSSISPAVPSSLNAASNSQSADENGEESDEPPIPVVKEIKEKDAFYSKKCKLFYKKDGEF
KEKGVGTLHLKMVAESKLQLLVRADTNLGNILLNIMVPSSMPCSRTGKNNVMVVCVPNPP
VDDKNPSTPVPVLIRVKTAEDADELHRILQEKKA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcggatagcggaaaaagagttgacggacaggaactgggatcaggaagatgaa
ggagaggaggcaggaacattttcaattgcgagtgaagatgtgatgaagaatcgcgccatc
aagaaagccaagcgtcgtaacgtaggagcagagggagagagtggaggggctttcaaagca
tttaaggggttctctctgacccctaacacagggacggcatcattctctggctttggtaat
ggtgctggtttcaaacctctgtccagcctgaccaatggcagcgtagcaccggtggcccca
tcctttgctggttttaatgttcccacgtcagctaaaactaacagtgctcccttaacgttt
aacagctccaccccatccaaacccacagatgatgtcacctctaatggctccgcccccagc
tgtaaagagtacaaccggcagctcaccgcactaaactgctctgtgcgagactggatcacc
aagcatgtcaatgacaaccccctgtgcgacctcaaccccatcttccgtgactacgagcga
cacctggccagcattgaaaagaaatatggcagcggcgcgtcagacagtggggcggagagc
gcatcatttggaggagagcagaagcagcttctgaagagcggaacaacagcttctgtttcc
ggcacgagtgctactgtgaccgcgtcagtcaccagtgcagcgccacagctcttctcattt
aaagacaaggatgctcctacagcagacaaaccagcagcggtggctcctccaggcgtctcc
tttaatttcggccagaaggtggacagctctgtgcttggtgcacttacgtccagcggagca
ccgtctttctcgttttcttcctcttcctcctcttcaggcgtgtctttgtttggatcagca
gtcagtagtatcagtcctgcggtgccatcctctctgaatgcagccagcaacagccagtct
gcagatgaaaatggggaggaatcagacgagccgcccattcctgtggtgaaagagatcaag
gaaaaagacgccttctattccaaaaagtgcaagttgttttataagaaggacggagagttt
aaggagaagggggtcggaacactgcatctgaagatggtggctgagagcaaacttcagctt
ttagtgcgagccgacaccaacctggggaacatcttgctgaacatcatggtgccctcttcc
atgccctgctcacgaactggcaaaaacaacgtgatggtggtgtgcgtgccaaatcctcct
gtggatgacaagaaccccagcacacccgtcccagtgctcatacgtgtgaaaacggcagag
gatgcagacgagctgcatcgaatcctgcaagagaaaaaagcctaa
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