Labeo rohita (rohu): 127164054
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Entry
127164054 CDS
T09007
Symbol
slco1c1
Name
(RefSeq) solute carrier organic anion transporter family member 1C1
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
127164054 (slco1c1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lroh02000
]
127164054 (slco1c1)
Transporters [BR:
lroh02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
127164054 (slco1c1)
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Gene cluster
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Sugar_tr
Kazal_1
Motif
Other DBs
NCBI-GeneID:
127164054
NCBI-ProteinID:
XP_050963663
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Position
4:44323050..44363183
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AA seq
714 aa
AA seq
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MPRNCIRETPPKENDIFLWKMDPPHKERRSPENGPSSARPCCSSLKMFLVALSFAYFAKA
LSGSYMKSTITQLERRFDIPSYLIGVIDGSFEIGNLLVIAFVSYFGAKLHRPKIIAMGCL
LMSLGTFLIALPHFIIGRYKFETSIRSSVNSSSNLSPCPVRPSDLATGPSPTSGPSSGCE
HESRLSMWIYVFLGNILRGIGETPVQPLGISYIDDHALEENAAFYIGCVQTISVVGPVFG
YILGSVCAKIYVDIGFVNMESISITPGDARWVGAWWLGYLIAGLITLLSAVPFWFLPKSL
PLPERRLAKYSPERTSFIKDSPLLEHKYQADEPANFLEMAKDFLPTLRSLLGNPVYFLYL
CVTIIQFNSLIGMVTYKPKYIEQHYGQSASKANFLMGVINIPAVALGMFSGGVIMKKFKL
SIMGAAKFALGTSLLGYFLSLFFFTMGCENASVAGITRSYNGTESLYKADSSLWASCNAN
CKCPETSWDPVCGENGLTYVSPCLAGCRTSHGSGMDTVFEQCSCIAVGNHTASAGQCNNR
DSCHRVFPYFLALSVITSFIISLGGTPGYMLLIRCIKPQLKSLALGFHTLTTRTLAGIPA
PIYFGAIIDTTCLKWGQKKCGGRGACRIYNTTAYRIAYLGLTLGLRTASFFLCILGLVVL
RRHVRRQERNTLANGGTGAAAGELQALRKEENNSCNSDQCPRTADYDPERETRL
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgccaagaaactgcattagagagacgccacccaaagaaaacgacatctttttgtggaaa
atggacccgccgcacaaggagagacggtcaccggaaaacggccccagctcggctcggccc
tgttgctcaagcctcaagatgttcctcgtggccttgtcctttgcctacttcgccaaggca
ttatccgggagctatatgaaaagcacaataactcagctggaaagacgcttcgacatcccc
agttacttaataggtgtcattgatggcagctttgaaataggtaacttgttagtgatcgcc
tttgtgagttactttggtgccaaacttcaccgtccgaagatcatcgccatgggctgtctg
ttgatgtcgcttgggacttttctaattgccttgccccattttataattggacgctacaag
tttgaaacatcgatccgatcgtcagtgaactccagcagtaacctctctccatgtccagtg
aggcctagcgatctggccacaggtcccagccctacttcgggaccaagctcaggttgcgaa
cacgagtccaggttgtccatgtggatctacgttttcctagggaatatcttgcgaggaatc
ggcgagaccccggtgcaacctttgggaatctcatacatcgatgatcatgctctggaggag
aacgcagccttctacatcggatgcgtccagacgatatcagtcgtcggtccggtgtttggc
tacattctggggtccgtctgtgccaagatatatgtggacattggatttgtcaacatggag
agcattagcatcaccccaggagatgcacgctgggtaggcgcctggtggctgggatacctt
attgcaggactcatcaccctgctctcggcggtgccgttttggttcttgcccaagtctttg
cccctgccagagagacggcttgccaagtattctccagagcggaccagcttcatcaaagac
tcgcccctgctggagcacaagtaccaggcggacgagccagctaacttcctagaaatggcc
aaagactttttgccaacgctgagatcccttttggggaacccagtctactttttgtatctc
tgcgtcaccatcatccagttcaactctttgatcggtatggtgacgtacaagccaaaatac
atcgagcaacattacggacagtcagcgtccaaagccaacttcttaatgggagtgatcaac
atcccagccgtagccttgggaatgttctcggggggtgtgatcatgaagaagttcaagctg
agcatcatgggagcagccaagtttgcgctggggacatctcttctgggctatttcctgtcg
cttttcttcttcaccatgggatgtgagaatgccagcgtggccggcatcaccaggtcatac
aatgggacggaaagtctttacaaagcggacagttctctctgggcgtcctgcaatgcaaac
tgtaagtgtcccgaaacgagctgggaccccgtgtgcggtgagaacggcctcacctacgtc
tccccctgcctggctggatgccggacgtcccacggctctggaatggacacggtgtttgag
cagtgcagttgtatagcagtcgggaatcatacggccagtgcgggccaatgcaacaacaga
gacagctgccatcgagtcttcccctacttcctagctctgtctgtcatcacttcctttatc
atctcgctgggtggaacgccgggatacatgctgctcatcagatgcatcaaacctcagctg
aagtctttagctttgggttttcacacattgacgacacgtactctagctggaattccagct
cctatatacttcggagccatcatagacaccacctgtctgaaatggggtcagaagaaatgc
ggtgggagaggagcctgtcgaatctacaacaccactgcctacaggatagcatatctgggc
ctgacgctgggcttacggaccgcttccttcttcctgtgcattctcgggctggtggtgcta
cgacggcacgttcggcgacaagagcgcaacacgctcgcgaacggaggcacgggggccgcg
gccggcgaactgcaagccctcaggaaagaagaaaacaacagctgtaactcggaccagtgc
ccacggacggcggattacgacccggaacgggagacgcgtctgtga
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