Labeo rohita (rohu): 127164069
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Entry
127164069 CDS
T09007
Symbol
zcchc7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127164069 (zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127164069 (zcchc7)
03016 Transfer RNA biogenesis [BR:
lroh03016
]
127164069 (zcchc7)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
127164069 (zcchc7)
Transfer RNA biogenesis [BR:
lroh03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
127164069 (zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
127164069
NCBI-ProteinID:
XP_050963722
LinkDB
All DBs
Position
1:35290463..35357271
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AA seq
581 aa
AA seq
DB search
MFSGYQERDDYEDELYRDDADSSLSDTDSDLEFRLYSQLHYSAEIQEDREDSREVQSSVP
QTQTQQNSLPPAPPVDVIVIDSGTDAITVSDNTEEDESVCANKGQSSKRCNRKLQPHPPY
VQAGRTSPDDIVVLDSESDDSSSESAESVAPFVADLDSDSDGLENWMILGQAKQDGDQSI
QLNLSLPENANYEENKQSWAVSDKDKWAQICNKGVGPRRVSNRYYAEKTITCHNCGKFGH
LSKNCTTPRKLPCCSLCGLQGHLLRTCPNRHCSNCLLPGHTYDDCLERAYWHKRCHRCGM
TGHFFDACPEIWRQFHITTTMGPLCQPSDPNACRKPAYCYNCSKKGHFGHECTERRMYNW
SYPSLPFISYYDTKHDFESRKFRIKKKAKELQEAGLISPDGAVVTNTPQPPRKKQKTSHN
QSPYPHNNQHTPKRRIAHTPKHHPQAHKQNTNLNVKQNSQTPGKYGKHTPQSKSKPQEQS
QKEAKKMKKKTQSQAIVLDEDADFPRGCKKSPHTTKAFSSHRKGDAKPKKPFGTEKNNKK
KADKISKKKERTWKKRQQKAAKDSSMYPSDENLFLIKQRKV
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgttctcaggatatcaggagcgggatgactatgaggacgagctgtaccgagatgatgcg
gactcgagtttgtctgacactgacagtgacctggagttccggctttattcccagctgcac
tacagcgctgagatccaggaggaccgtgaggactcaagagaggtccagtcatcagtacca
cagactcaaacacagcagaattccttgcctcctgctccacctgtagatgttattgtgatt
gactctggcacagatgccatcacggtgtcagacaacacagaagaagatgagagcgtctgt
gctaacaaaggtcaatcatcaaaacgctgtaacaggaagttgcaaccacatccaccatac
gttcaagcaggaagaacctccccagatgatattgtggtgttggattctgaatcagatgac
agctcttctgaatctgcagaatctgtagctccttttgtggcggatctggattcagactca
gatgggctggagaactggatgattctgggccaggccaaacaggatggagatcagagcatc
cagctcaacctctccttaccagaaaatgcaaattatgaagagaataaacagagctgggct
gtatcagataaggataaatgggcgcagatctgtaataaaggggttggcccgaggcgcgtc
tcaaaccgctactacgctgaaaaaaccatcacgtgccacaactgtggaaagttcggccat
ctctccaaaaactgcactacaccacggaagttgccgtgttgctcgttatgtgggcttcag
ggacacttactgaggacctgtccgaaccgtcactgttctaactgcttgctgcccggccac
acctatgacgactgtctggagagagcttactggcacaagcgctgccaccgttgtggcatg
actggacacttctttgacgcctgcccagaaatctggagacagttccacattacgaccacg
atgggacctctctgccaacccagtgatccaaatgcctgcaggaaacctgcctactgttat
aactgctctaagaaaggacatttcggccatgaatgcactgagaggagaatgtacaattgg
tcgtatccctccctgccatttatttcctattatgacacaaagcatgacttcgaaagccgt
aaatttcgaatcaaaaagaaagccaaagaacttcaggaagccggattgatttcacctgac
ggagctgtagtcacaaataccccacaaccgcccagaaagaaacaaaaaaccagtcacaac
cagtctccatacccacacaacaaccagcacacaccgaagagacgcatcgcacacacaccc
aaacaccatccgcaagcacacaaacagaacacaaacttgaatgtcaagcagaactcacaa
acaccagggaagtacggcaaacacacccctcagagcaagtccaaaccgcaagagcaaagc
cagaaggaagccaaaaagatgaaaaagaaaacacaatctcaagctatagttttagatgaa
gatgcagactttcctagaggctgcaaaaagagccctcacacgacaaaagctttttcatcg
catcggaaaggcgacgcgaagccgaagaagccctttggaacagaaaagaacaataaaaag
aaagcagacaaaatatcgaaaaagaaggagagaacgtggaaaaagagacaacaaaaagct
gcaaaagattcgtccatgtatccctcagatgaaaacctttttctgattaagcaaagaaag
gtgtga
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