Labeo rohita (rohu): 127164113
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Entry
127164113 CDS
T09007
Name
(RefSeq) proto-oncogene vav-like isoform X1
KO
K05730
guanine nucleotide exchange factor VAV
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04510
Focal adhesion
lroh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127164113
09142 Cell motility
04810 Regulation of actin cytoskeleton
127164113
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_2
CAMSAP_CH
SH3_1
SH3_9
CH
SH2
C1_1
PH
CDC24
LZ3wCH
C1_2
zf-RING-like
PH_10
Motif
Other DBs
NCBI-GeneID:
127164113
NCBI-ProteinID:
XP_050963778
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Position
1:complement(5122001..5139454)
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AA seq
845 aa
AA seq
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MELWRQCAGWLIQCRVLPENHRVTWDSAQVCDLAHALRDGVLLCQLLNNLLPQSVNLRLI
NLRPQMSQFLCLKNIRTFLCACQEKFGMKKNELFEAFDLFDVRDFAKVIDTLSILSQTPL
ALQRGFRPFPDEACVGDDDIYTGLSDQIDDTVEEDDDLYDCVEEDENEGDDIYEDLMRTE
EPEIQQKVEVDKRSCCLQEIRQTEEKYTNTLESILQHFLKPLQPFLQPVDIENIFINIQD
LANTHRSLLHELQESILHLRAENLYQIFINYKERLLLYGRYCSQVEAATKHLDKITSTHE
DVKMKLEECSMRANSGRFSLRDLLMVPMQRVLKYHLLLQELMKHTVDQQDKENLRTALDA
MRDLAQCVNEVKRDNEIIRQITTFQLCIENMSQSLALYGRPKIDGEFKICSMEKKSKQDR
YGFLFDKALLVCKKRSGENLELKELIELQHFQLRDEPSGEKDSKKWTHTFLLMDLYGQGG
YDLYFKTRELKKKWLEQFEMALSNMCPENGTANGHDFQMHCFEDTTSCKACQMLLRGIFY
QGYRCSRCKMAAHKECLGRVPACGRNSEMSGTLKKGKTMRLASQRQAKPGLPKMEVCADY
YGLPPPPVAFGQPLPLSVGDVVELTRAEADLQWWEGRNLTIGEVGWFPCSKVQPFVPAHS
PDLSGLPWFAGNMDRAGAKTLLTSRSDGTFLVRQKDAGEFAISLKFNMDTRHIKVTYSEG
LYRINEKKAFKGLFELVQYYQENSLRECFKDVDSRLQTPYKQPEQSGVPQHSNARYAGMS
ERYHGTAKVRYDFSARDRTELSLREGDTVKIISKKAHNGWWKGEVYGRVGLFPANYVEEE
HSDYC
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggagttgtggagacagtgtgccggatggctgattcagtgccgagtgcttcctgagaac
cacagagtcacctgggacagcgcacaggtgtgtgatttggcccatgcgctgagagatggc
gttttactctgtcagctgctcaataacctgctgccgcagtcggtcaacctgcgtctgatt
aacctgcgaccccagatgtctcagttcttgtgtctgaagaacatcaggacgttcctgtgt
gcctgtcaggagaaattcggcatgaagaagaatgagctttttgaggcatttgacctgttt
gacgtccgggactttgcgaaggtgatcgacacgctgtccatcctgtcacaaacgccgctg
gccctgcagagaggattccggccgtttccagatgaagcatgtgttggagatgatgacatc
tacaccggcctctcagaccagatcgatgacacggtggaggaagatgatgatctttatgac
tgtgtggaggaagatgagaatgaaggagatgatatttatgaagatctgatgaggacagag
gaaccagaaatacagcagaaggttgaagtggacaagaggagctgctgtcttcaggaaatc
agacagacggaggagaaatacacaaacacactggaatcaatacttcagcactttctgaaa
ccgctgcagcctttcctgcagcctgtggacatcgagaacatcttcatcaacatccaagat
ctggccaatacccatcgctctctgcttcacgagctgcaggagtccatactgcatttacga
gccgagaacctctaccagatcttcatcaactacaaagagaggctgttgctgtatggacgt
tactgcagtcaggtggaagccgccaccaaacacctggacaaaatcaccagcacgcatgaa
gatgtgaagatgaaactggaggagtgctcgatgcgcgccaacagtggcaggttttcactg
cgagatctgctgatggttcccatgcagagagttctgaagtatcatctgctgctgcaggag
cttatgaaacacacggtggaccagcaagacaaggaaaacttgcgcactgcactggatgcc
atgagggatctagctcagtgtgtgaacgaggtgaagagagacaacgagatcatccgtcag
atcacaacgtttcagctgtgcatcgagaacatgtctcagtctctggcattatacggacga
cccaaaatagatggagaattcaagatctgcagcatggagaagaaatccaaacaggacagg
tacggctttctcttcgacaaggctctgttagtgtgtaagaagcgcagcggcgagaatctg
gagctgaaggagctgattgagcttcagcatttccagctgagagacgagccgtcaggagag
aaagacagcaagaagtggacgcacacgttcctgctgatggatttgtacggtcagggcggc
tacgatctctactttaagacgcgagagctgaagaagaagtggctggagcagtttgagatg
gcgctgtccaacatgtgtccggagaacggtacagctaacggtcacgactttcagatgcac
tgttttgaagacaccacctcatgtaaagcctgtcagatgctcctcagggggatcttctat
cagggctatcgctgctcacgctgtaaaatggccgctcataaagagtgtctgggtcgagtt
cctgcatgcggacgaaactctgaaatgtctggaacactcaagaagggtaaaacgatgagg
ttagcgtctcaaagacaggccaaaccaggtctaccaaagatggaggtgtgtgcagattat
tacggtctccctccgccaccggtggcgttcggccagccgctcccgctgtctgtgggcgac
gtggtggagctgacacgggccgaggccgacctgcagtggtgggagggcagaaatctgacc
atcggagaggtcggctggtttccctgcagtaaagttcagccatttgtgccggcgcattct
ccagatttatcaggactgccctggtttgctggtaatatggaccgggccggtgctaaaact
ctgctgacgtctcgctccgatgggacgtttctggtgcgtcagaaagacgccggagaattc
gccatcagcctcaagttcaacatggacaccagacatataaaggtcacgtactcagaggga
ctctacaggatcaatgagaagaaagccttcaaggggttgtttgagctggtgcagtactat
caggagaactcactgagggagtgttttaaggatgtggactccagactgcagacgccgtac
aagcagccggagcagagcggagtgccgcagcacagcaacgcacgctacgcaggtatgagt
gagcgctaccacggcacggctaaagtgcgctacgatttctctgcacgggaccgtaccgaa
ctctctctacgggagggagacaccgtcaaaatcatctccaagaaagcccacaacggctgg
tggaaaggagaggtgtacggcagggtgggcctttttcctgctaattatgtggaggaggag
cattcagattactgctga
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