Labeo rohita (rohu): 127164164
Help
Entry
127164164 CDS
T09007
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lroh04054
]
127164164
Pattern recognition receptors [BR:
lroh04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
127164164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_5
TIR_2
LRR_1
LRR_9
LRR_EndoS
ThsB_TIR
LRRCT
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
127164164
NCBI-ProteinID:
XP_050963896
LinkDB
All DBs
Position
4:20657383..20662594
Genome browser
AA seq
966 aa
AA seq
DB search
MIIWSALELFKGNLKLRKVKKSNWIIYSIQVIITENMSKREHGLCFLKYCSWTSWLLYCC
VFMNVVNGYSVKNCTVRGSLKYAQNINVLCDKRSLHFVPGNIPDKATYLDISYNVIQKII
KEYFSHLSNLRSLNALHNKIREVEEGAFSSLVALQELNLANNKLTDILEGMFQNLGNLSV
LHLNDNLITNISFSAFSPLISLSKVNLSRNHLMKLSQVQPLFLLPQLKEVHIGSNGFTSF
QTSEVSNVSLTLNVLDLCKNPLKVFRITSDIFPHLDNLDLAFINESMTWDVQDKSYLQSV
QHLNLSGIQLPLEKIKDLLQTFNSSLASLRLHFLGDVKVRALLRNVCLISSLRFLGLQRN
NITSISKDEMQFCTHLTQLDLSNNRLCSIPAVISSLSSLEFLDLTFNNIKNISSVDFAKL
TQLRTLQIYGNEISIIEKCAFKDLKNLTTVMIGSNRLSFNGYFKNDLQKLEILDLSNNKL
DSVRSGDLDSLKSLKNLSLPDNQILFIEEGSFSGLKNLIFLNLQSNKLSRVSIKASVFSG
ILNLRTLLLNNNYISFDSQEALAQPPFKYLRKLKILNIFSQGHKGMVYLPSNLFKGMWSL
EELQAENLNINSLHPDTFTYTPYLWVLDLSRNDFTSLTTKIFLPLRVLKTLHLSKTGLQS
LDFLINANLSKLHLLHVSKNSLSVINETVIQSFPTLIYLDLRGNYLSCDCTNAWFVNWTI
SSNDTEVESAYDLTCNYPDKLKGHKLLDLDVGSCNVDVGFFCFLSTTTLVLVTLLGSFLF
HFLKWQVIYAYYLLLAFIHDNKQQRKPKGLQYDSFISYNVHDELWVMRELLPQLEDEQGW
KLCLHHRDFEPGKPIMENIVDGIYNSRKTICVISRHYLESEWCSREIQIASFRLFDEKKD
VLILVFLENIPSHQLSPYYRMKRLIQKKTYLSWPKPGEDTRVFWQKLRVALETKGTPEME
HPLAGI
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgattatttggtcagcgttggaattatttaaaggaaacctgaagctaagaaaggtcaag
aaatccaactggataatttattcaattcaagtgatcattacagagaacatgtctaagaga
gaacatggtttgtgcttccttaaatactgcagttggacatcatggctgctttactgctgt
gttttcatgaatgttgtaaatggatactcagtaaagaactgtactgttagagggtctttg
aaatatgcacaaaacattaatgtgctttgtgataagaggtccctgcatttcgtaccgggg
aatataccggacaaagccacatatttggacatttcttacaatgtcatacagaagataatc
aaggagtatttctctcacctgtctaaccttagaagtctcaacgcactacacaacaagatc
cgggaagtggaggaaggagcgttcagcagtttggtcgctttgcaagagttaaatctggcc
aacaacaaactgacagatatcttggaaggaatgtttcagaatctgggaaatctctctgtg
ctacatctaaatgataacttgatcacaaatatcagcttctctgcattttcacccctgatc
agtttaagtaaagtaaatctgtccagaaatcatctgatgaaattaagccaagttcagccg
ctctttttattaccacaattaaaggaagtgcacatcgggagtaatggctttacctctttt
cagacatcggaggtttccaacgtatctttgacactaaacgtcttggatttatgtaaaaat
cctttgaaagtgttcagaatcacttcagatattttccctcaccttgataatctggatttg
gcttttattaatgaaagcatgacatgggatgtgcaggacaaaagttatctacaaagtgtg
caacatctaaatctaagtggaatacaattgcccctggagaagatcaaggatctcctacaa
accttcaactcttctttggccagcctgaggctacactttctgggggatgtaaaagtgaga
gctttgttgaggaacgtctgtctgatttcttctttgagatttctgggcttgcagaggaac
aacattacatccatatcaaaagacgagatgcaattctgcacacacttaactcagcttgat
ctctccaataacagactatgcagcatccctgctgtcatcagcagcctatcaagtctagag
tttttggacctcaccttcaacaatataaagaacataagtagtgttgattttgccaaatta
acccaattacggacccttcagatttacggtaatgagatatctattattgagaaatgtgct
tttaaagatctgaaaaacttaacaactgtaatgattggatctaacagattgtctttcaat
ggatattttaaaaatgatcttcaaaaacttgagattttggatctatcaaataacaagctg
gactctgtccgtagcggagatcttgactccttaaaatcactgaagaatttgtctttacca
gacaatcaaatattatttattgaagagggttccttcagtggactaaaaaatttaattttc
ttgaatctgcaatcaaacaagctctctcgggtttcaataaaagcttccgtgttctccgga
atcctaaacctgagaacacttctgttgaacaataactatatttcatttgacagtcaagag
gctcttgcacagccaccatttaaatatctgagaaagctaaagattctgaacatttttagc
caaggtcataaaggaatggtttacttgccctcaaaccttttcaagggaatgtggtctttg
gaagaacttcaagcagaaaatcttaatataaattctttacatccagacacatttacttac
actccttatctgtgggtactggatctcagcagaaatgattttacttcactcacaacaaaa
atatttctgccactccgggtcctcaagacactccacctgtccaaaactggcttgcaatct
ttggactttctcattaacgcaaatcttagtaaactacacctgttgcacgtaagcaagaat
tctctatcggtcattaatgaaactgtgatccagtcttttcccacactgatttaccttgat
ctacgaggaaattatctctcatgtgactgtaccaatgcctggttcgtcaactggaccata
agtagcaatgacacagaagtcgagagtgcttatgacctcacatgcaattacccagacaaa
ctcaaaggacataaactcctggatcttgatgtaggttcatgtaatgtggatgttgggttt
ttctgtttcctttccacaaccacactggtcttagtaacccttcttggctcttttcttttt
cacttcctcaaatggcaggtcatttatgcttactaccttctccttgcttttattcatgat
aacaaacagcagagaaagcccaaaggtttgcagtatgattcttttatttcctataatgtt
catgatgaattgtgggtaatgagggaactgttacctcagctggaagacgaacaaggctgg
aagttgtgtttgcatcacagagactttgaaccaggcaaacctatcatggaaaatattgtt
gatgggatttacaatagtcgcaaaaccatctgtgtgattagtcgtcactacctggaaagt
gagtggtgttccagagagatccaaattgctagtttccgtctttttgatgagaaaaaagat
gttctcatcctggtattcctggagaatattccaagtcatcaactgtctccgtactacaga
atgaagagactaatccagaagaagacgtatctcagctggcctaaaccaggagaggacacc
agggtcttctggcagaaactgagagtagctctggaaaccaaaggcaccccagaaatggag
catccattggctgggatttag
DBGET
integrated database retrieval system
