KEGG   Labeo rohita (rohu): 127164254
Entry
127164254         CDS       T09007                                 
Name
(RefSeq) ras-related C3 botulinum toxin substrate 1
  KO
K04392  Ras-related C3 botulinum toxin substrate 1
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh04010  MAPK signaling pathway
lroh04145  Phagosome
lroh04148  Efferocytosis
lroh04310  Wnt signaling pathway
lroh04370  VEGF signaling pathway
lroh04510  Focal adhesion
lroh04520  Adherens junction
lroh04530  Tight junction
lroh04620  Toll-like receptor signaling pathway
lroh04810  Regulation of actin cytoskeleton
lroh05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    127164254
   04310 Wnt signaling pathway
    127164254
   04370 VEGF signaling pathway
    127164254
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    127164254
   04148 Efferocytosis
    127164254
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    127164254
   04520 Adherens junction
    127164254
   04530 Tight junction
    127164254
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    127164254
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    127164254
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    127164254
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lroh04131]
    127164254
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lroh04147]
    127164254
   04031 GTP-binding proteins [BR:lroh04031]
    127164254
Membrane trafficking [BR:lroh04131]
 Exocytosis
  Small GTPases and associated proteins
   Rho GTPases
    127164254
 Endocytosis
  Lipid raft mediated endocytosis
   Arf6-dependent endocytosis
    127164254
  Macropinocytosis
   Ras GTPases
    127164254
 Others
  NADPH oxidases (Nox) and associated proteins
   Nox associated proteins
    127164254
Exosome [BR:lroh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   127164254
  Exosomal proteins of other body fluids (saliva and urine)
   127164254
  Exosomal proteins of colorectal cancer cells
   127164254
  Exosomal proteins of bladder cancer cells
   127164254
GTP-binding proteins [BR:lroh04031]
 Small (monomeric) G-proteins
  Rho Family
   Rac/Cdc42 [OT]
    127164254
SSDB
Motif
Pfam: Ras Roc GTP_EFTU AAA_7
Other DBs
NCBI-GeneID: 127164254
NCBI-ProteinID: XP_050964055
LinkDB
Position
4:20262781..20263639
AA seq 187 aa
MESMESINFVFVGDSAVGKTCLLISYLTNVFSGEYIPTFSRIKSIPVIVDGIPLRLVFTD
IGGQDELDIARPIHYLDADVFLIVFSLVSPESFERVREKWHPDVRRFCPNTPIILVGTKL
DLRDDKDTIEKLKEKTQTPISYRQGLDMAKEIGAVKYFECSALTQIGLTTMFEETIQKGL
CQCVAKN
NT seq 564 nt   +upstreamnt  +downstreamnt
atggagagcatggagagcataaattttgtttttgttggggacagtgctgttggaaaaaca
tgccttctgatcagttacctcaccaatgttttttcaggggaatacattcctactttctca
agaataaagtctatccctgtaattgtcgatggaattcctttgagactggtctttacggat
ataggaggacaggatgaattagacattgctcgacctatacactaccttgacgcagatgta
tttttgatcgtattctctcttgtgagtccagaatcatttgagagggtccgtgaaaagtgg
catccagacgtcagacgtttttgccccaacactccgataatcctcgttgggactaaactt
gacttgagagatgacaaggacaccattgaaaagctgaaagagaagacacaaacccccatc
agctatcgtcaaggtctggatatggccaaagaaataggagctgtgaagtactttgagtgc
tcagccttaacacagattggccttacgacaatgtttgaagaaacgattcagaagggtctc
tgtcaatgtgtggcgaagaactga

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