Labeo rohita (rohu): 127164372
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Entry
127164372 CDS
T09007
Symbol
cbll1
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai isoform X1
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127164372 (cbll1)
04131 Membrane trafficking [BR:
lroh04131
]
127164372 (cbll1)
04121 Ubiquitin system [BR:
lroh04121
]
127164372 (cbll1)
Enzymes [BR:
lroh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127164372 (cbll1)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
127164372 (cbll1)
Membrane trafficking [BR:
lroh04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
127164372 (cbll1)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127164372 (cbll1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_Hakai
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
AraC_N
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
127164372
NCBI-ProteinID:
XP_050964246
LinkDB
All DBs
Position
4:30811625..30821762
Genome browser
AA seq
488 aa
AA seq
DB search
MDHSDNDMQGTDGPLGGPDVRRRIPIKLLPKQARNKPAPRPQRPAGRLPSKSHSVDEEGF
NFKQEDRFDCGVKSGDAFASQRRFPQQLYWDYKLNLIGEKDETPVHFCDKCGLPIKTYGR
MIPCKHVFCYECALHHERKGDKMCPGLNMYSCTDPVQRIEQCQRGSLYMCSIVQGCKRTY
LSQRDLQAHINHRHMRSGKSSSSRSDSLHLPPASEVSDRFRVPPPHLSKPHVLIPPPLAH
PGHDPYSQPPSGSHDDLRPPQGQPPGDMGPSRSLAQETFRISTVTTRKHSNLITVPIQDD
SASSGPSRDPLPQPGNAPPPHHHPGDYPGQPVVTHPHHMMAPPQQHYGPPPPPPPISHPM
PHPGQGSNTPHMVFNQAPPPLSSVPPPITPPPGHLIGQMPPFMNHPPPGPPPQHGGPPVN
APPPHHYNPQFPEDKSTLSPPFNQPGGLSPGMWPAPRGPPPRMQGPPPQGQMPGPHHPDQ
GRYRPYYQ
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggaccacagtgacaatgatatgcagggtacggatgggccgttaggtggtcctgatgtc
agaaggaggatcccaatcaaacttcttcccaaacaggccaggaataaacctgccccacga
ccccaaagaccagcaggacggttaccttccaaatcccattctgtagacgaagaagggttt
aacttcaagcaggaggaccggtttgattgtggcgtgaaatctggagacgcatttgcgagt
cagcgtcgattcccacagcagctgtattgggattacaagctaaatttgatcggtgaaaag
gatgagacacctgttcatttctgtgacaaatgtggactgccaattaagacatacggtcgt
atgatcccatgcaagcatgttttctgctacgagtgtgcattacatcatgaaaggaagggt
gataagatgtgtccaggtctaaacatgtacagctgtacagacccggtccagcggattgaa
cagtgccagcgtggatctctgtacatgtgcagtatcgttcagggttgcaaacgcacctat
ctatcccagagagacctgcaggctcacatcaaccaccggcacatgcgctccggcaagagc
tccagcagccgctctgactctctccaccttcctcccgcctcggaggtgtccgaccgcttc
cgcgtgcccccacctcacctatctaagccccatgtgctcattcctcctcctctggctcat
cccggacacgacccctacagccagcctccctctggctcccacgatgacctccgacctcca
caaggccagccgcctggagacatgggaccatcccgctctctcgctcaggagaccttccgc
atctcgaccgtcaccactcggaagcacagcaacctcattacagttcccattcaggatgat
tccgcaagctccggaccatcccgtgacccccttccccagcccggcaatgctccgccccct
caccatcaccctggagactatccaggtcagcctgttgtgactcatccgcatcacatgatg
gcgccgcctcagcagcactacggcccccctccgccccctcctcccatcagtcaccctatg
ccacacccgggacagggctcaaatacacctcacatggttttcaaccaagctcctccgccg
ctgtcatctgttccccctcccattaccccacctcccggacacctcattggtcagatgcct
ccatttatgaaccatcctcctccagggccgccccctcagcatggaggtccccctgtcaac
gccccgccgccccatcattataacccccagtttcccgaggacaagagcacgctcagcccg
ccgttcaaccaacccggcggcttgagtccaggaatgtggccggcgcccaggggtcctcct
ccacgaatgcagggtccccctccacagggacagatgccggggccgcatcaccccgatcag
ggccgctacagaccgtattaccagtaa
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