Labeo rohita (rohu): 127164396
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Entry
127164396 CDS
T09007
Symbol
pparaa
Name
(RefSeq) peroxisome proliferator-activated receptor alpha a
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03320
PPAR signaling pathway
lroh04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
127164396 (pparaa)
03320 PPAR signaling pathway
127164396 (pparaa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127164396 (pparaa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lroh03310
]
127164396 (pparaa)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
127164396 (pparaa)
Nuclear receptors [BR:
lroh03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
127164396 (pparaa)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
127164396
NCBI-ProteinID:
XP_050964287
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Position
4:30961360..30999348
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AA seq
480 aa
AA seq
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MIQSLPWSSAMVDMPSLYSPLSPLGDPILDSPLCGELIDDMEVLEDISQSLSDDTFNSFH
VLDYQNSNSAADSSTVLDVLTPASSPSSEVFASSAVQDENSSGSLALECRVCADRASGFH
YGVHACEGCKGFFRRTIRLKLEYDKCERNCKIQKKNRNKCQYCRFRKCLAVGMSHNAIRF
GRIPQSEKQRLKAEQDVSGKEEHKSRQPDTKSLARQMHEAYLKHFHMNKAKARVFLMGKT
STPPFVIHDMDTLQHAERKLLTQLLGDVASGDISTVREREVEARLFLFCQYTSVATVTEL
TEFAKAVPGFAALDLNDQVTLLKYGVYEALFTLLASCMNKDGLLVARGGGFITREFLKSL
RKPFSDMMEPKFQFAMRFNALELDDSDLALFVAAIICCGDRPGLSDVSQIERIQESIIHA
LRLHLSSNHPDNALLFPKLLQKLADLRQLVTEHAELVQEINKMEDSSLHPLLQEIYRDMY
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgatacaaagcttgccgtggtccagcgccatggtagacatgccgagcctatacagtccc
ttgtcccccctgggcgatcctattctggacagccctctgtgtggagagctcattgatgac
atggaggtgctggaggacatctcacagtccctcagcgatgataccttcaactcctttcac
gtactggactaccagaacagcaactcagcagcggacagctcaactgtcttagatgtctta
acaccggcgtctagtccgtcctcagaggtgtttgcgtccagcgcggttcaggacgagaac
tcctccggttctctggccctcgagtgccgcgtgtgcgccgaccgggcctcaggtttccac
tacggagtgcacgcctgcgaagggtgcaaggggttcttcaggagaacaattcgactcaaa
ctggagtacgacaagtgcgaacgcaactgcaagatccagaaaaagaaccgcaacaaatgt
caatactgccgtttccgcaagtgccttgcagtgggcatgtcccacaacgctatccgtttt
gggcggataccccaatctgagaagcagaggctaaaagcagagcaggacgtcagcgggaaa
gaggagcacaagtcccggcagccggacactaagagtctggctaggcaaatgcatgaagcc
tacctcaaacacttccatatgaacaaagccaaagcacgtgtgtttctcatgggcaaaacc
agcactccgcccttcgtcatccacgacatggacactctccagcacgccgagcgtaagcta
ctcacccagctgctgggcgacgtggcgtccggagacatctccaccgtgcgggagagagaa
gtggaggcccggctcttcctgttctgtcagtacacctcggtggcgacggtcacggagctg
acggagttcgccaaggccgtgcccggcttcgccgccctggacctcaacgaccaggtgact
ctgctgaagtacggcgtttacgaggcgctcttcaccctgctggcctcctgcatgaacaaa
gacgggctgctggtggctcgcggcggaggcttcatcactcgcgaatttctgaagagcctt
cgcaaacccttcagcgacatgatggagcccaaatttcagttcgccatgaggttcaacgcc
ctagagctggacgacagcgacctggcgctgttcgtggccgccatcatctgctgcggagac
cgtccaggactgagcgacgtgtctcagatcgagcgcatccaggagagcatcatccacgcc
ttacggctccacctgtcgtccaaccaccccgacaacgccttgctctttcccaagctgctg
cagaaactggccgacctgcggcagctggtgacggagcacgccgagctggtccaggagatc
aacaagatggaagactcttcactccacccgcttctgcaggagatctacagagacatgtac
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