Labeo rohita (rohu): 127164471
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Entry
127164471 CDS
T09007
Symbol
hcfc2
Name
(RefSeq) host cell factor 2
KO
K27390
host cell factor 2
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127164471 (hcfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127164471 (hcfc2)
03029 Mitochondrial biogenesis [BR:
lroh03029
]
127164471 (hcfc2)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL-HCF complex
127164471 (hcfc2)
Mitochondrial biogenesis [BR:
lroh03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
127164471 (hcfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
fn3
Kelch_FKB95
Motif
Other DBs
NCBI-GeneID:
127164471
NCBI-ProteinID:
XP_050964392
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All DBs
Position
4:39893449..39901933
Genome browser
AA seq
734 aa
AA seq
DB search
MINKGPIWKTVRSYAGPVPRARHGHRAVAIRELVVVFGGGNEGIATNLHVYNSVTRQWFL
PAVRGDIPPGCAAHGFVCEGTRILVFGGMVEFGQYTNSLYELQASRWLWKKLKPRPPRNA
SPPCPRIGHSFTLHANKCYLFGGMANDSEDPNGNVPRYLDDFYELELQVQSGVKGWNIPE
TKGGGPSARESHSSVVYCGKGGSAPKLYIFGGMCGHRLNDLWQLDIETMTWSLPMIRGQL
PQPRSLHTSNVIGNRLYVFGGWVPVGEAEDTLHADGVKWVCTDSLSMLNLDTMTWHDLTP
EEHQQRLTSDEQLDEQAEGDAHWPKARAGHCAVTVGTRLYVWSGRDGYKKYNNYQVCCKD
LWYLETERPSTPGAVFLVKSTINMLHVAWRPLPAAECYLLQLQPITSQSASSDPQSTPSP
LPDTDRKESVQKVSQPGADVKVKEERESSSQESILRPKELGEDGAEVQPKDQGVSVMSDV
NKTGKLNSTSQCQKERDNSLKPSQKSEDPVWFDVGVFKTLYCEVTHYFLPSEDGDMATTL
SGRNSSSSEWKLPGPHCFKDREKQELASGVTYKFRVAGLNSRGLGDFSPLSEFKTCQPGF
PGAPSAVKITKDKDSVHITWEPPTSPSGKITEYSMYLAVRKSRGNSVERPGELAFIRIYR
GTKTSCTVSESQLSNAHIDCSARPAVVFRIAAKNEQGYGPATQIRWLQDASKLKSSVTQA
DSSPPAAEPDTTCR
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgattaataagggtcccatatggaaaacagtgcggtcttacgctggacctgtcccgagg
gcgaggcacgggcaccgggctgtggccatacgggagctggtggttgtgtttggaggtgga
aacgagggaatagcgaccaatctgcatgtttataactcggtgaccaggcaatggttcctg
ccagcagtgagaggcgatatcccacctggttgtgcagctcatggctttgtttgtgaaggc
acacggatcctggtgtttggagggatggttgaattcgggcagtataccaacagcctctat
gaactgcaggccagtcgatggttgtggaagaaactgaagccccgcccaccaaggaacgca
tcacctccatgcccacggattggccacagcttcactcttcatgctaataagtgttacctt
tttggtggaatggccaatgacagtgaagatccaaatggcaatgtaccaaggtatttagat
gacttctatgagctggagctgcaggtccaatctggggttaaaggctggaacattcctgaa
accaaagggggaggcccgtcagccagggaatcccatagctctgtggtgtactgtggcaag
ggtggaagtgcaccaaagctgtatatatttgggggcatgtgtgggcacagactgaatgat
ttgtggcagctagacattgagactatgacttggtcattacctatgatcagaggtcagctg
ccacaacccaggagtctgcacacctccaatgtgattggaaacaggttatatgtgtttgga
ggctgggttcctgttggagaggcagaggacacgctccacgctgatggagtcaagtgggtc
tgcactgactctctttccatgctaaatcttgacacaatgacatggcatgacttgacaccg
gaagaacaccagcaaagattgacttcagacgaacagttggacgaacaggcagagggtgat
gcacactggccgaaagcacgagctggacactgtgcggtaaccgtcggcactcgtctgtat
gtctggagcggacgagatggatacaaaaagtacaataactaccaggtgtgctgcaaagat
ctgtggtacctggaaacagagaggccttccactcctggtgcggtgttccttgtgaagtcc
acaattaatatgctgcatgtcgcctggcggcccctacctgcagctgaatgttatttgctt
cagctgcagccaatcacatctcagtccgcttccagtgatccacaatccacaccaagtcca
ctgccagacactgacagaaaggagtctgtacaaaaagtgtcccagccaggtgctgatgtc
aaagttaaagaagagagagaatcttcatcacaggaaagcattttaaggccaaaagaactg
ggtgaggacggggcagaagtccaaccaaaagatcaaggtgtttccgtgatgtcagacgtg
aataagactggtaagctgaatagcacatctcagtgccagaaagaacgagacaattctcta
aaaccatcccaaaagtctgaagacccagtgtggtttgatgttggtgtgtttaaaacactg
tactgtgaggttacacactacttcctgccttctgaggatggtgacatggcaacaaccctg
tctggtcgaaactcatccagcagtgagtggaagttgccgggtcctcattgttttaaggat
cgggagaagcaggaattggcctcaggagtcacgtataaattcagggtggccggactgaac
agccgtggccttggcgacttcagccccctcagtgagtttaaaacctgccagcctgggttt
cctggagcgccatctgctgtgaaaatcaccaaggataaagattcagtgcatatcacctgg
gagcctcccacctctccatccgggaagattacggagtattccatgtacttggctgtgaga
aagagtcgagggaacagcgtggagaggcctggcgagctggccttcatccgaatctaccgt
ggtaccaagacctcatgcacagtcagcgaaagccagctgagcaacgcgcacatcgactgc
tcagcacggcctgcagtcgtcttccgaatcgctgccaagaacgagcagggctacggtccg
gcaactcagatccgctggctacaagatgcaagtaagctaaaatcgtcagtgacacaggca
gactccagtcctccagcagcagagcctgacaccacctgcagatga
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