Labeo rohita (rohu): 127164593
Help
Entry
127164593 CDS
T09007
Symbol
caprin2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127164593 (caprin2)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
127164593 (caprin2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_dimer
C1q
Caprin-1_C
BclA_C
Motif
Other DBs
NCBI-GeneID:
127164593
NCBI-ProteinID:
XP_050964562
LinkDB
All DBs
Position
4:32610720..32623417
Genome browser
AA seq
945 aa
AA seq
DB search
MRETKIMVQLSPSRTIETLTPELTLEKEDDQGSPKSESPRVLTALQLALNPASTSYYGYE
KYIEDGLICLKHKIRNIEKKKLKLESYNERLKKGDKLNQDQLEAVKKYEEVVHNLKFAKE
LQKTIGALTQDLLKAQRKTARQEKVMRIEEERKRLSLMLQVQYVLHSLQREDVRRNFCNT
RQHSCYLSTQDIESLLDLASLLGCKRDHSMSLEDQMEQAAIVYWELLEGKERPVAGSTYK
HMKDKLLRLVDCGFFDHISLPKVDSQEKTEALTVDPPSRPCGLSTLVKLSSKEVPTTEFL
NRRYLPETDATERTQDENASPRSWKEEFLAMKEREPPDSWEMEFSDPPVSSQSPIQKPWK
GAAGLIPKTADIAKRPTVDPKEKRQRKSKVEQDSKPMPVAVEVFGSPTSLPKDPVERKQQ
LESLMDQISGSFSFMQESLLDGETSPTNGQTKRCRPSPGSSTPLAQRELTKSPSDILPQS
QRSTPLRILLSGEAKGCLSNGDRSINSSDLDLHHEDKPHKQGEGFTSPPLYRRGSSTSVP
LENQSTVQAGKQTLCNGVSTTVSAQTFSTPPSHRSISADSTFHNIHSVFNVASLPISESS
GMKSDESGFSESMHLSYTSAKTPSYSTASTQTPPELNLPEDDVQIEGQYQLECPVSAAGH
VFSGPQPQSRLGQSCYPRSTARGMTRTGRGLGHSYRSPGGYRGGYEAYRVNVRSPGGGFI
SQSHTTHRDPASALYVSRENGYQQSFKRGGGTATQRSSAGWSDSSQVSSPDREGAYPLDS
GISDTLSIPPMEVPITSQGPHTLMPVHVYPLTQLRVAFSAARTANFAPGTLDQPIAFDLL
HTNLGDMFDTTTGRFTCPAAGAYVFIFHILKLAISVPLYINLMRNEEVMVSGYANDGAPD
HETASNHAVLQLFQGDQVWLRLHRGAIYGSSWKYSTFSGFLLYQD
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgagagagactaagatcatggttcagctgtcaccatctcgaactatagagacgttaacg
ccagagttgaccttggagaaggaagatgaccagggcagccccaaatccgagtcccctcga
gtgcttactgccctccagctcgcccttaaccccgcctcgacctcctactacggctacgag
aaatacattgaggacggcctcatctgcctcaagcacaagatccgtaacattgagaaaaag
aagctgaaactggaaagctacaatgagaggctgaagaagggggacaaactaaatcaagac
caactggaagctgtgaagaagtatgaggaggtggtccacaatcttaaatttgccaaagag
ctccagaagaccattggtgccctcacacaagatttgttgaaggctcagcggaaaactgct
cgacaagagaaggtgatgaggattgaagaggagaggaaacgtctgagcttgatgctccag
gtgcaatacgtcctccacagtttgcagagagaggacgtccggaggaacttctgcaacacg
agacaacattcctgttacctgtccacacaggacattgagagcttgctggatctggcgtca
ttattgggatgcaaaagagatcatagcatgagtttagaggatcagatggaacaggctgct
attgtttactgggagcttctggaagggaaagaaagaccagttgctggctcaacatataag
cacatgaaggacaagctacttcggctagtggactgtggcttttttgatcacatatcactt
cctaaagttgacagtcaggagaagactgaggctctaacagtggaccctccatcaaggcct
tgtggcctctccacactggtgaagctgagctcaaaagaagtgcctaccacagagtttctt
aacagacgatacctacctgaaacagacgccaccgagcgcacacaggacgagaacgcgtcg
ccccgtagttggaaggaggagtttttggccatgaaggaaagagagccaccagactcatgg
gaaatggagttttctgatcctcccgtgtcttctcagtcccccatacagaagccatggaaa
ggggcagcaggactgattcctaagaccgcagacatcgccaagagacccacagttgacccc
aaggagaaacgtcaaaggaaaagcaaggtggagcaggactctaagccgatgcctgtcgca
gtggaagtcttcggctctccaacctcgttaccaaaagaccctgttgagcgcaaacagcag
ctggagtctctgatggaccagatctcaggatccttcagcttcatgcaggagtctcttcta
gatggagaaacgtcacccacaaacggtcaaacaaagagatgccgtccatctccaggctcc
tctactcctcttgcacagagggaattaacaaaaagcccatcagatattctgcctcaatcc
cagcggagcacaccactacgaatcctgctttctggagaggctaaaggctgtctgtcgaat
ggagaccgctctataaacagctcggaccttgatctgcatcatgaagacaagccacataaa
caaggtgagggctttacctctccaccgctgtaccgcaggggatcctccacctcagtccca
ttagaaaaccagagcactgtacaggcagggaagcagacgttatgcaatggagtatcaacc
actgtgtcggcacagacattttccactccacccagtcacagatccatcagtgcagacagc
accttccacaacattcactctgtgtttaatgtggcatctttgcccatcagtgagagctca
gggatgaagtcagatgagagtggattctctgagtccatgcatctgagttacacgtcggcc
aaaaccccgagttactccactgccagcacccagacaccacctgaactcaacctacctgaa
gatgacgtacagattgaaggccagtaccagctggagtgtcctgtcagtgcagctggtcac
gtgttttctggccctcagccacagtctcgtctgggtcagtcctgctacccccgcagtaca
gcgagaggtatgacgcgtacaggcaggggtttgggtcactcatacagatcacctggtggt
tacagaggtggttatgaggcctacagagtgaatgtgcggtctccaggagggggcttcata
tcccagagccacaccacacacagagaccctgcatctgctctttatgtgtccagagaaaac
gggtatcagcagagctttaaacgaggtggaggcacagcaactcaaaggagcagtgctggt
tggagtgactcctctcaggtgagcagcccggacagggagggtgcgtatcccctcgactca
ggaatcagtgacacactctccatcccgccaatggaagtgcccatcacatcccagggcccg
cacactctgatgcccgtacacgtgtacccgctcacccaactccgcgtagccttctccgcc
gcccgcacggcaaacttcgcccccggcactctggatcaaccgatcgccttcgacctgctg
cacacaaacctcggcgacatgttcgacacgaccaccggccgcttcacctgtcccgctgcc
ggcgcgtatgtctttatcttccacatccttaagctggccatcagcgtgcctctgtatatc
aacctcatgcgtaacgaagaggtgatggtgtccgggtatgccaacgacggagctccagac
cacgagacggccagcaatcacgccgtcctccagctgttccagggcgatcaagtgtggctg
cgactgcaccgtggcgccatctatggcagcagctggaagtacagcaccttctctggtttc
ctgctgtaccaggactga
DBGET
integrated database retrieval system