Labeo rohita (rohu): 127164758
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Entry
127164758 CDS
T09007
Symbol
dtx2
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX2 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127164758 (dtx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127164758 (dtx2)
Enzymes [BR:
lroh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127164758 (dtx2)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127164758 (dtx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
zf-UDP
zf-C3HC4_2
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
127164758
NCBI-ProteinID:
XP_050964770
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All DBs
Position
5:10572274..10599386
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AA seq
613 aa
AA seq
DB search
MATGSSFHFGGSGSRNGPSFASPSSSSSGVPGQAQPMAVVWEWQDDLGFWRPYTGQVSSY
IEQCLQRGAGTASSSSNNSICLAQADPSLSAYIIDIPNLKQFRQDTGKMRAVRRSLFPQS
SALGSGVLWEWANDEGGWTAYEIRTSILLEHSYQAGQATADLNPHGYNYIVDLTALEQVN
KVTSYRRRVRRQGSVPYPLASGSVIHTGPACTCHQCVSNSSTTGPMLSRSRHSYTAGQTN
RPSLQTQHGRLPGTSSSSAYLPYPRRPVSMGSSLWNGPWSTPPSVAHPSGPPQAFSHHAN
GLSIPTIPLHINGSSSVNSALAGMASILMSAAGLGVRFLTAPFSQSGSSRPTKGQPSSVK
RAKRQSRTAPTQKPEEVIKKYMEEVPVPPEEDCIICMECLSCPSGYEVPAECSQPQFAVG
KLTKCGHTFHTLCMLAMYNNGTKDGSLQCPSCKTIYGEKTGTQPKGKMEIYSIPQSLPGH
PDCGTIQIIYNIPPGIQGPEHPNPGQPYTCRGFPRFCFLPDNDKGRKVLELLKVAWTRRL
IFTVGTSSTTGEPDTVIWNEIHHKTEMMSNVSGHGYPDPNYLDNVLSELASQGVTEDCLK
RELQSQGAQGSAM
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaggctccagttttcatttcggagggagtgggtctagaaatggaccatcattc
gcatcaccgtcgtcttcctcgtctggagtgccaggacaggctcagccgatggcggtggtt
tgggaatggcaggatgatctggggttctggaggccctacaccggacaggtgagcagctac
atcgagcagtgtctccagagaggagccgggaccgccagcagcagcagcaacaacagcatt
tgtctggcacaggcagaccccagcttgtctgcgtacatcattgacatccccaacctcaaa
cagttcagacaggacactggaaagatgcgtgctgtacggcgatccctgttcccgcagtcc
tctgccctgggcagtggggttctttgggagtgggccaacgatgaaggaggctggactgcg
tatgagatccgaacttccattttgctggagcacagctatcaggcggggcaggccacagct
gacctgaacccacacggctacaactacattgtggacctcactgctctggagcaagtcaac
aaggtaacaagctacagacgacgcgtcagacggcaaggcagcgtgccgtatcctctcgcc
tccggttcggttattcacacgggcccggcctgtacctgtcaccaatgtgtgagcaacagc
agcaccaccggacccatgctgagccggtcacggcattcctacaccgcggggcagaccaac
cggcccagcctccagacccagcatggaagacttcctggaaccagctcctcttcagcctac
ttgccctaccccagaagacccgtctcgatgggaagctcgttatggaacggcccatggagc
accccaccttcggtggctcatccttcaggaccgccacaggcttttagtcaccatgcaaat
ggcttgagcatcccaaccatccctctgcacataaacggatccagtagtgtgaactctgca
ctggcaggcatggcttccattttgatgtcagctgcaggactgggagttcgcttcttgacc
gcccccttctcccagagtggctccagcaggcccaccaaaggccagcccagctccgttaag
agggcaaagagacagtccaggacagcaccgactcagaaaccagaagaagttattaagaaa
tacatggaggaagtgccagtgcccccagaggaggactgtattatctgtatggagtgcctg
tcctgcccgtctggttatgaggtcccagctgagtgctctcagcctcagttcgccgtgggc
aaacttacaaaatgtggtcacactttccacacgctctgcatgctggccatgtacaacaat
ggaaccaaggacgggagcctgcagtgcccctcatgtaagacaatctacggagagaagacc
ggcacccaaccaaagggcaagatggagatttacagtatccctcagtctttgcctggacac
ccagactgcggcactatacaaatcatttacaacatcccgcccggaatacagggtcccgag
cacccaaacccagggcagccgtatacgtgcagaggattccctcgcttctgtttccttcct
gacaatgacaaaggaagaaaggtgttggagttgctgaaagtggcatggacacggcgcctc
atcttcaccgtgggcacttccagcaccacaggggagccggacaccgtcatatggaacgag
atccaccacaagacggagatgatgtccaacgtctccggccacggctatcccgaccccaac
tacctggacaatgtgctctcagaactggcgtcacagggcgtgacggaggactgcctgaaa
cgagagcttcagagccaaggggctcaaggttcagccatgtga
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