Labeo rohita (rohu): 127164779
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Entry
127164779 CDS
T09007
Symbol
mef2cb
Name
(RefSeq) myocyte enhancer factor 2cb isoform X1
KO
K04454
MADS-box transcription enhancer factor 2C
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04010
MAPK signaling pathway
lroh04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127164779 (mef2cb)
04371 Apelin signaling pathway
127164779 (mef2cb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127164779 (mef2cb)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
127164779 (mef2cb)
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Motif
Other DBs
NCBI-GeneID:
127164779
NCBI-ProteinID:
XP_050964797
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Position
5:17556268..17711530
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AA seq
475 aa
AA seq
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MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYAST
DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCDSPDPDADDSVGHSPESDEKYHKI
NDNIDLHMISRQRICAVPSSTYEMPIPVNNQIYPGNHNLLPLAHHGLQRNSMSPGVTHRP
PSAGGLMGTDLSTGAGTSAGKDGIPTYYRNGYGNHRNSPGLLVSSGGMNKSMQAKSPPPV
NLGMNSRKPDLRVLIPPGAKNNMPSINQRINNSQSAQSLATPVVSVATPTLPGQGMGGYP
SAISTSYGTEYSLSSADLSSISGFNSANTLHLGSMSGWQQHQIQNMQHSALSQLGNCSST
HLCQGSNLSLPSTQSLHIKSEPVSPPRDRSSSTTPAGYGPLPSHQQHQGPPPQGRQDSGR
SPADSLSSCGSSHEGSDRDDHRPDFHSPLGLGRPGLDEQDSPSVKRVRLSEGWAT
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaaaaagattcagatcacacggattatggacgaacgcaacagacaggtgacg
tttacgaagagaaagtttggcctgatgaagaaagcctatgagctgagcgtgttgtgtgat
tgtgagattgccctcatcatcttcaacagtaccaacaagctgttccagtatgccagcaca
gatatggacaaagtgttgctcaaatacactgagtacaacgagccacatgagagcaggacc
aactctgacattgtggagaccctgagaaagaagggtctaaatgggtgtgacagcccagac
cccgacgcagacgactcggtgggccacagcccagagtcagacgaaaaataccataaaatc
aacgacaacattgatctgcacatgatcagcagacagaggatatgtgctgtgccctcttca
acctacgagatgcccatccccgtgaataaccagatatacccaggcaatcataacctgctt
ccgctggcccaccacggcctgcagagaaacagcatgtcacctggggtcacacatagacca
cccagtgcaggtggtctgatgggcactgatctctccactggcgcgggcaccagtgctggt
aaggacggcatccccacatactacagaaatggctatggaaaccaccgtaactctccagga
cttctcgtgtcctccggaggcatgaacaagagcatgcaggccaagtcccctccgccggtg
aacctggggatgaacagccgtaaacctgacctacgagtgctcatcccacccggagccaag
aacaacatgccctctattaatcagagaataaacaactctcagtccgcgcagtcactggca
acccccgtggtttctgtagcgacacccactctaccagggcagggaatgggcggctaccca
tcagccatttccacctcatatggtactgaatattctctgagcagtgcggatctgtcctct
atatctggctttaacagtgccaacactctgcatctgggctcaatgagtggatggcagcaa
catcagatccagaacatgcagcactctgccctcagtcagctgggaaattgctctagcact
cacttatgtcagggttcaaatctctccctgccctctactcaaagcctgcacatcaagtcc
gaacctgtttctcctcctagagatcgatccagcagcaccacgcccgccggctacggcccg
ctaccgtcccaccagcagcaccagggcccgcccccacaggggcgacaggactcgggccgc
tctccggccgacagcctcagcagctgcggcagctcgcacgaaggcagtgaccgcgacgac
caccgtcccgacttccattcgccgttaggattgggccggcccggcttggacgagcaagat
agcccatccgtgaagcgcgtccgcctctcggaggggtgggccacatga
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