Labeo rohita (rohu): 127164787
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Entry
127164787 CDS
T09007
Symbol
ebf2
Name
(RefSeq) transcription factor COE2
KO
K09103
early B-cell factor
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127164787 (ebf2)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
127164787 (ebf2)
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GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
127164787
NCBI-ProteinID:
XP_050964819
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All DBs
Position
5:1508992..1530566
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AA seq
581 aa
AA seq
DB search
MFGSQDHPAGNITGLKVGTFEEEMDPVRSWVRNVGVIDANIAAQSGVALSRAHFEKQPPS
NLRKSNFFHFVLALYDRNGQPVEVERTAFVDFVEQDKTGEKTNNGTHYKLQLLYSNGVRT
EQDLYARLIDSVTKQPISYEGQNKNPEMCRVLLTHEVMCSRCCEKKSCGNRNETPSDPVI
IDRFFLKFFLKCNQNCLKTAGNPRDMRRFQVVLSTTVNVDGPVLAISDNMFVHNNSKHGR
RSRRTDSNETVESSMEYATPCIKAISPSEGWTTGGAMVIVIGENFFDGLQVVFGSMLVWS
ELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKL
IPRHPGDPEKLAKEMLLKRAADVVESLYGNTTSNQDMLLKRAADIAEALYSVPRPHSQLQ
AMPSSPVHGSVMGLSSYPTQLGVNIGEPGQTSSQGYTRNPSSLSPRGYPSASTPQQSGYG
SNGGMSASYGAVPMSGLGVSGSPGFNSASPNSSPYAIMPSSPTVPGSSSSSLLPFTSFPS
STKQKSAFAPVLRPQGSPSPVCQTSGGSSFRAMTGLVVPPM
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggagtcaagatcacccggcaggaaacatcactgggttgaaagtgggaactttt
gaagaagaaatggatcctgttcgttcttgggtgcggaatgtcggtgttattgatgcaaac
atagcggcacagagtggagtggccttatcccgtgctcactttgaaaagcagcctccctcc
aatctcagaaagtccaacttcttccattttgttctggcactctacgaccgcaatgggcag
cctgtggaagtggagaggacagcgtttgttgactttgtggagcaggacaagacgggggaa
aagaccaataatggaactcactacaaactccagctcctctatagtaatggtgttcgcaca
gaacaagacctttatgcacgtctcattgattctgtcactaaacagcccatatcatatgaa
ggacagaacaagaatccagaaatgtgtcgtgttctgctaactcatgaggtcatgtgcagt
cgctgctgtgagaaaaaaagctgcggcaatcgcaacgagacaccatctgaccctgtcatc
attgacagatttttcttgaagtttttcctaaagtgcaatcaaaattgtctgaagacagca
gggaacccccgagacatgagaagatttcaggtggttctgtcgactacagtcaatgtggat
ggtcctgtactagccatttctgataatatgtttgtgcacaacaactccaaacacggacgc
cgctctcgtagaacggattcaaacgagacggtggagtccagcatggaatatgctactccc
tgtatcaaagccatcagccccagtgaaggctggactacaggcggggctatggtgattgtg
attggggaaaacttcttcgacggtctgcaggtggtgttcgggagcatgctagtgtggagt
gagctaatcactcctcatgcaatccgagttcagactcctcctcgacacattccgggggtt
gtagaagtcacactgtcttacaaatctaagcagttctgtaaaggagctccgggccgcttc
gtttatacagcgctgaatgagccaactattgactacggcttccagagacttcaaaagctg
atccctcgacatcccggtgaccctgaaaaattggcaaaggaaatgttactcaaaagagca
gcagatgttgttgaatccctttatggaaataccaccagcaatcaggacatgctgctgaaa
cgggctgcagatatagccgaggctttgtacagcgtcccacgacctcacagtcagctgcag
gccatgcccagctccccggtgcatggcagcgtcatgggcctcagctcttatcccacacag
ctgggtgtaaacatcggagaacccgggcaaaccagcagccaaggttacacgcgtaaccca
agcagtttgtccccacggggctacccttcagcatcgacccctcagcagtccggctacgga
tctaacggaggcatgagtgcgagttacggggcggtgcccatgagcggtctgggtgtttca
gggtcacctggctttaacagtgcctccccaaacagctctccttatgctatcatgccgtct
agtcccactgttcccggatccagctcatcctccctcttgcccttcacatctttcccatcc
tccaccaaacaaaaaagtgcctttgctcctgtcctgagaccacagggttcaccgtcacct
gtctgccaaacctcaggaggatccagctttagagcaatgacaggccttgtggttccccca
atgtag
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