Labeo rohita (rohu): 127164825
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Entry
127164825 CDS
T09007
Symbol
unga
Name
(RefSeq) uracil DNA glycosylase a isoform X1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
127164825 (unga)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lroh03400
]
127164825 (unga)
Enzymes [BR:
lroh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
127164825 (unga)
DNA repair and recombination proteins [BR:
lroh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
127164825 (unga)
Prokaryotic type
127164825 (unga)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-GeneID:
127164825
NCBI-ProteinID:
XP_050964876
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Position
5:complement(1489864..1495218)
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AA seq
300 aa
AA seq
DB search
MFSNIACFSFLNVHMSGLVAKRTRSASKYIKILSQGKKQKLERDDVTSPLSLSPEQLDRI
SKNKKAALERLSANQTVPSGIGESWKKALNAEFGKPYFRSLMSFVAEERQKHTIYPPSNE
VFTWTQTCNIKDVKVVILGQDPYHGPNQAHGLCFSVQRPVPPPPSLVNIFKELASDIEGF
EQPGHGDLTGWAKQGVLLLNAVLTVRAHQANSHKDKGWETFTDAVIHWLSTNMQGLVFIL
WGSYAQKKGAAIDKKRHHVLQTVHPSPLSAHRGFFGCKHFSKTNELLKKSGKKPIDWKAL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgttttccaacatagcctgctttagttttttaaatgtacacatgtccggtcttgttgcc
aagcgaacacggagtgcaagcaaatatattaaaatattgtctcagggcaaaaaacaaaag
ttggagagggacgatgtgacatccccactatcgctgagtcccgagcagctcgatcggatc
tccaaaaacaagaaggcggctctggaacggctctctgcaaaccagactgttcccagcggg
atcggagagagctggaagaaggcgctcaacgcggaattcgggaagccctactttagatca
ttaatgtcatttgttgctgaggagaggcaaaaacacaccatctacccaccgtcaaatgaa
gtttttacctggacacaaacgtgcaacataaaagatgtgaaggttgtgatacttggccag
gatccgtatcatggacccaaccaggctcatgggctttgtttcagcgtgcagagacctgtg
cctcctccaccgagtttggtgaacatcttcaaagaactggcttcagacatcgaaggcttt
gagcaacccggtcacggtgatcttacaggatgggcgaagcaaggagttctgttgctgaac
gctgtgctgacggtgcgcgcacaccaggccaactcgcacaaggacaagggctgggagacg
ttcactgatgctgtgattcactggctcagcactaacatgcagggtctggttttcattctc
tggggctcttatgctcaaaagaagggggccgccatcgacaagaaacgacaccacgttctg
cagacggtccacccctcaccgctttctgctcaccgcggcttctttggatgtaaacatttc
tcaaagaccaatgaactgctgaagaaatcaggaaagaagcccattgactggaaagcgttg
tga
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