Labeo rohita (rohu): 127164860
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Entry
127164860 CDS
T09007
Symbol
grin2bb
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04020
Calcium signaling pathway
lroh04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
127164860 (grin2bb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127164860 (grin2bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lroh04040
]
127164860 (grin2bb)
Ion channels [BR:
lroh04040
]
Ligand-gated channels
Glutamate (ionotropic)
127164860 (grin2bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
127164860
NCBI-ProteinID:
XP_050964930
LinkDB
All DBs
Position
1:20238125..20363698
Genome browser
AA seq
1777 aa
AA seq
DB search
MGVGLAMFKGLYLHSSAMLVSLHLSSSPFSDRRVLSFVSLASSSKPPLSLSLLLLSLFFF
PTCESRRGGGIGTPVGGMSGGQSIISPPHYPPPGVNPVGPPLPPKFAQGLSIAVILVGNS
SEVSLSEGLEKEDFLHVPLPPKVELVTMNETDPKSIINRICALMSRNWLQGVVFGDDTDQ
EAIAQILDFISAQTHIPILGIRGGSSMIMAAKDDHSMFFQFGPSIEQQASVMLNIMEEYD
WYIFSIVTTYYPGYQDFVNRIRSTIENSFVGWELEEVLLLDMSVDDGDSKIQNQMKKLQS
PVILLYCTKEEAMTIFEVAHSVGLTGYGYTWIVPSLVTGDADNVPSVFPTGLISVSYDEW
DYGLEARVRDAVAIIAMATSTMMLDRGPHTLLKSGCHGAPDKKGSKSGNPNEVLRYLMNV
TFEGRNLSFSEDGFQMHPKLVIILLNKERQYERVGKWENGSLAMKYHVWPRFELYSDAEE
REDDHLSIVTLEEAPFVIVEDVDPLSGTCMRNTVPCRKQLKLQNLTGDSGIYIKRCCKGF
CIDILKKIAKSVKFTYDLYLVTNGKHGKKINGTWNGMVGEVVLKNAHMAVGSLTINEERS
EVIDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFEYF
SPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAV
IFLASYTANLAAFMIQEEYVDQVTGLSDKKFQHPNDFSPPFRFGTVPNGSTERNIRNNYK
EMHTYMTSFHQKNVNEALHSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGYIFATT
GYGIAIQKDSGWKRAVDLAILQLFGDGEMEELEALWLTGICHNEKNEVMSSQLDVDNMAG
VFYMLGAAMALSLITFIAEHLFYWQLRFCFMGVCSGKPGITFSISRGIYSCIHGVQIEEN
KSALNSPSATMNMNMNNTHSNILRLLRTAKNMTSVPGVNGSPRSALDYSHRESAVYDISE
HRRSLAGHSDCKPPPYLPEDNMFSDYVSEVERTFGNLHLKDSNLYQDHYLHHHGGTGSEL
ALGMSGPLPNRPRSLGSASSLEGGYDCDSLGGGVAPIFTTQPRQSLTHRNREKFDLIAGH
PTQSSFKSGLPDLYGKFSFKGGASSSGFIAGHDRYCGGGGVGSGGDDGNIRSDVSDISTH
TVTYGNLEGHGKRRKQYRDSLKKRPASAKSRREQDEIELGFRRRPHHTIHHHHHHHPATQ
AHRSATPPVERKSQRGGNSTSYLFRDKENLRDFYVDQFRAKEGASPWEHLDLSDAPGMGG
GVGLGGGGCGGVVSSGGAGGACTSLVPMEDFLKGKSKKTECKGGMGGGSPGQQGHACWEK
GIGGVGGLAGGDWECRNCHSGGVGSGGSKPVCMHGGGGAGGYPAAGGVGGTGGGSGQISS
RPSSATCKRCDSCKKPGNLYDISEDNHLLLDQTGGKHPLESGKGGGGTGAQTQVQRRKFG
PGGKVLRRQHSYDTFVELQKEGAGRMGGFGGSGGASMLPPPRSVSLKDKDRYMEGTSPYA
QMFEQYAGGERETSYFGDRGKGGGSSFSLFRGGEGGLHRRSVGERDMRDRDRGMMGGGVG
GTRGVGTYSLSKSLYPDKVNQNPFIPTFGDDQCLLHGAKSYYVKKQQAQPQQQQTPQQQQ
QQQQLLNNSRSDFRGSMGVTTYLPASATSGVLSNVTPRFPKELCLGGPLGNHHGGGPSNN
KLLSARDGLGMGQGQRPFNGSSNGHVYEKLSSIESDV
NT seq
5334 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgggctggcaatgttcaagggactgtatcttcactcctccgccatgcttgtc
agcctccacctctcctcttcccctttctccgaccgtcgcgtcctgtctttcgtctccctg
gcttcttcctccaaaccgcctctctccctgtcgctccttctcctctctctcttcttcttc
cccacctgcgagtctcgccgtggaggcgggatcgggacacccgtcgggggcatgagcggc
ggccaatcgataatcagccctcctcattatccgccaccaggagtcaatccagtgggtcct
ccattgccaccaaagtttgctcaaggccttagcatcgcagtgatccttgtggggaactcc
agcgaggtgtctctctctgaaggtctggagaaagaggacttcctccacgtgcctctccct
cccaaagtcgaactggtcacgatgaacgaaaccgaccccaagagtatcataaaccgcatc
tgtgctctgatgtcacggaactggctccagggtgtggtgtttggggacgataccgatcag
gaggccatcgcccagatattggacttcatctcggctcagacgcacatccccatcctgggc
atccgtggaggctcttccatgatcatggcagccaaggatgaccattccatgttcttccag
tttggtccctctatagagcagcaagcctctgtcatgcttaacataatggaggaatatgac
tggtacatattctccatcgtcaccacctactaccctggataccaggactttgtcaatcgg
atccggagtaccatcgagaacagttttgttggctgggagctggaagaggtgctgctgttg
gacatgtcagtagacgatggcgactcaaagatccagaaccagatgaagaagctccaaagt
cctgttatactattgtactgcactaaagaagaagccatgaccatttttgaggtggcacat
tctgtcggcctcactggttatggttacacctggatcgtaccatctctggtgacaggggat
gcagataatgtacccagcgtctttccaacaggtttgatctctgtttcctacgatgagtgg
gactacggactggaggctcgagtgcgtgatgctgtagccataatcgccatggcaacctcc
acaatgatgctggatcggggtcctcacacgctgcttaagtctggatgccacggtgcacct
gacaagaaaggcagcaagtcaggaaaccccaacgaggtgctgaggtacctcatgaatgtg
acatttgaagggcgtaacctctccttcagtgaggatggttttcagatgcacccaaagttg
gttattatactgttaaataaggagaggcagtatgaaagggttggtaaatgggagaacggg
tctctggcaatgaagtaccacgtgtggcctcggttcgagctctactcggatgctgaggag
cgggaggacgaccacctgtccattgttacgctggaggaggctccgtttgttattgtggag
gatgtcgacccgctcagtggcacctgcatgaggaatacagtgccgtgcagaaaacagctc
aaactccaaaatctgacaggagattcagggatctacattaaacgctgttgcaagggcttc
tgtatagacatcctcaaaaagatcgccaagtctgtgaaattcacctacgatctctacctg
gtgaccaacgggaagcatggcaaaaagatcaacggcacatggaatggcatggtcggagag
gtggtgttgaagaatgcccacatggctgtggggtccctgaccattaatgaagagaggtca
gaggtcatcgacttctctgtgcccttcatagagactgggattagtgtcatggtctctcgt
agcaatggcacagtgtcgccttctgcctttttagagcccttcagcgctgatgtctgggta
atgatgttcgttatgctgttgatagtttcagccgtggctgttttcgttttcgagtacttc
agtcctgttggctataatcgctgcttggcagatggacgagagcctggcggtccctccttc
accatcggaaaagctatttggctactttggggtttggtcttcaataactctgtgcccgta
cagaaccccaaaggcactactagcaagatcatggtctcggtctgggccttcttcgctgtg
attttccttgccagctacactgccaacctggccgcatttatgattcaagaggaatatgtg
gaccaggtgactggcctgagtgataaaaagtttcaacatccgaatgacttctcccctcca
ttccgctttggtactgtgcccaatggcagcacagagagaaacataaggaacaactacaaa
gagatgcacacctatatgaccagctttcaccagaagaacgtaaacgaggccctccacagc
ctgaagacgggtaaattggatgcattcatctacgatgcagcggtcttgaactacatggcc
ggacgtgatgagggctgtaaactggtaaccatcggcagtggttatatctttgctactaca
gggtatggcattgccattcagaaagactcaggctggaagagggcagtggaccttgccatt
ctgcagctctttggagatggtgagatggaggaacttgaggccctgtggctgactggcatc
tgccacaatgagaaaaatgaggtgatgagcagtcagctggatgtagacaacatggcaggt
gtgttctacatgctgggagctgcaatggccctgtcccttatcacattcatcgcagagcac
ctcttctactggcaactgcgattctgcttcatgggtgtgtgctcgggcaagcccggcatc
accttctccatcagcaggggcatctacagttgcatccatggtgttcagattgaagagaac
aaatcagcccttaactcaccatcagccactatgaacatgaacatgaacaacacccactcc
aacattctccgtttgttgcgtactgccaaaaacatgacctcagtgcctggggtcaatggt
tcacctcgcagcgcattggactacagccatcgtgagtcagccgtttatgacatcagtgaa
caccggcgtagcctagcaggccactcagactgcaagcctccaccgtacctgccagaggac
aacatgttcagcgactatgtaagcgaggtggagaggacttttgggaatttgcacctgaag
gacagcaacctgtaccaggatcattacctacaccaccatgggggcacgggatccgaactg
gctcttggtatgtcgggtcccctgcctaaccgacctcgtagcttagggagtgccagttca
ttggagggtgggtacgattgtgacagcttagggggaggggtagcgcccatctttaccacc
cagccacggcagtcgctgacacatcggaacagggagaagtttgacctgattgcgggtcac
ccgacccagtcgagcttcaagtccggcctgccagatctgtatggaaagttctccttcaag
ggcggggcatccagttcagggtttattgcaggacacgacaggtattgcgggggaggtggg
gtgggttcaggaggggacgacggaaacattcgatccgacgtgtccgatatttccactcac
accgtgacctacgggaacctcgaggggcatggcaagcggcgcaagcagtacagggacagc
ctaaaaaagagacccgcttctgccaagtctcggcgtgagcaggatgagattgagcttggc
ttcaggagacgcccccaccacacaatccaccatcatcaccaccatcatccagcaacgcaa
gcacaccgctcagccaccccacccgtggagcgcaagagccagagaggtggtaacagcacc
tcctatctgttcagagacaaagagaatttgagggacttctatgtggaccagtttcgagcc
aaggaaggggcatccccatgggagcatttggatttaagtgatgctccaggaatgggtgga
ggagtgggactgggtggaggcggttgtggtggagtagttagtagcggtggtgctggggga
gcgtgcactagtttggttcccatggaagatttcctgaaaggtaaatccaagaagacagaa
tgtaagggtggaatgggaggaggatcgcctgggcaacagggccatgcatgctgggaaaag
ggcatcggaggggtgggagggttggctggaggggattgggaatgtcgcaattgccacagc
ggaggggttggaagtggaggaagcaagccagtttgcatgcatgggggtggcggggctggg
ggctatccggctgccgggggagttgggggaaccggtggagggagtggacaaatctcaagc
cgccctagctcagccacctgcaagcggtgtgactcgtgcaagaaaccgggcaacctgtat
gacatcagtgaggacaaccacctcctcttggatcaaactgggggcaagcaccctctggag
agcggaaagggagggggaggcacaggggcccaaacccaggtacagaggcggaaatttggc
ccaggtggtaaggttttgcgcaggcagcactcttatgacacttttgtagagctgcagaag
gaaggggcgggcaggatgggtgggttcggaggcagtggcggagcgtctatgcttcctcca
ccccgaagcgtgagcctaaaagacaaagaccgctacatggagggcacgagcccctacgcc
cagatgtttgagcagtatgcgggaggggagcgggagacatcatattttggggacagaggg
aagggtgggggttcatcatttagcttattccgtgggggtgaaggtgggttgcaccgtcgc
tccgtgggtgagagagacatgagggacagggatagaggcatgatgggaggaggtgtgggc
ggtacccgaggggtcgggacttactccttgtctaaatctctctacccagataaggtgaac
cagaacccattcatcccaaccttcggcgacgaccagtgtctattacacggtgccaaatca
tactacgtcaaaaagcagcaggcacagccgcagcagcaacagacgccacaacagcagcag
cagcagcaacagctcctcaacaacagtcggtctgacttccggggctccatgggggtgact
acctatttgcctgcgtccgcaacatctggggtgctgtccaatgtgacccctcggttcccc
aaggagctatgtctgggcgggcctcttggcaaccaccacggtggaggacctagcaacaac
aagctgctgtcagcaagggatgggttaggaatgggtcaaggacagagaccgtttaatggc
tcgagcaatggacatgtttacgagaagctctccagtatagagtctgatgtctga
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integrated database retrieval system
