Labeo rohita (rohu): 127164866 Help Entry 127164866         CDS       T09007                                  Symbol col17a1a Name (RefSeq) collagen, type XVII, alpha 1a   KO K07603   collagen type XVII alpha Organism lroh  Labeo rohita (rohu) Pathway lroh04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:lroh00001]  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     127164866 (col17a1a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen Motif Other DBs NCBI-GeneID:  127164866 NCBI-ProteinID:  XP_050964943 LinkDB All DBs Position 1:17230601..17248840 Genome browser AA seq 1480 aa AA seqDB search MDKLATTKIVKVEGGSGGSGKEIQKHTETVTTTRLTSLPPKGNSSSVSSQQVLTSIVNSS GSGGASGGAVLVEKKIITQSSAEGGTSRSYVISSSSSGSSASSSSGAGSVISGFNEISRE ISVAGPISSSMVKSSSSAVKSSSGISTTITTVGSSSATGGDLSSGYGSISSSEFVSGSSG GSVSISGGSMNISRGGGGGGGSSAFMSAGGTSSSMTVTKFSSSSPSGTRKGLSYSTVPTE RKTSLSLHAGGYEGSSSGNSSPEYIKKEYVSTSVATRGRTQTRESEIRARLQSASPSTRW TELDDVKRLLKGSRSGSISPPRSPTNTLPIPKKASVDTRHESQSGCDGTVLDAGFSGYYT NPNNLSYTTLQQPSSPTGGMQNNLTLSSSALGSAVYGMHNNLSTSGGALMVNGISAGQVY GAQKNVGSAGLATTITTVPSSPITADDVFVKDGKFVAIGKENVAAKKETERLIMSKNTGK QFVTSTTSAGADSEDSLKREKKMISSTTESTITASRASTKDKATYAEIRKDDSDGAGLGF CSCCSWWKWLLALILGLLLLLGLLCGLIALGEEVRKLKARVDAIDGGENAVSARTSRFSA SSAVNIIDPLESSYAERIPGVRADNTINLGSASAPQDPVILQRTIQQILRSELQSDTIRA SLATSLKGERGEPGPKGDQGPPGVKGDTGFPGIPGPPGLIGHPGQEGPRGPKGSAGESGN DGLPGPRGREGPAGPRGEPGPSGIGEKGEKGSSGDVGAPGLAGPQGPVGPKGDAGAQGIP GLQGAPGPQGFRGDSGDPGPKGDKGPAGPPGVKGDHGERGPRGATGEPGQAGPAGPPGEK GPKGSAGAPGPDGVKGIRGDQGPIGLPGARGPSGPPGDAGIPGAPGLQGPPGLPGTPGQP GSKGEPGEPGRVISAGANTNTVGVPGPPGPPGAPGPAGAPGLSGPIGPAGLPGPPGAKGD RGDKGEDGKPGVSESAGKKAASEPGPPGPPGPPGPPGNDGKPGVGQPGPPGEKGEPGSFV PTSETFFAGPPGPPGPVGPKGSQGDIGPQGFPGQPGLPGEPGIGIPGQPGTPGPRGEQGP EGPPGPQGPQGPLGPMGPEGPKGDAGVPGAPGIPGYSYGGGSRSAPGPPGPPGPPGPPGA PGSGGGGSPDVVQQISDYLRSEPIREYLAGPPGPPGPPGPPGSGSEDSLANRVIEYLQRD EVRQYLIGPPGPPGPPGVPGGYGFNTQEVAGRVLRLMNDGGLRGLPGPPGPPGPQGPPGS SGGLVSYAVNENQQQIRAEPQEFIKRHPSSNENLDYAAIAKQVSDYIKSNGLLQGLDGLT GNPGPRGPPGPPGFPGLNGVPGPPGPPGTSIDFSSTNMTPIIDYIREHRMNGPPGVPGQK GEPGNPGSAGQTGDRGFPGPPGFTGVPGMKGEKGLNGFPGSPGLQGSPGMKGEKGDRGFS GSPGYPGLQGPTGSPGMKGEKGERGEPSYVTRRKRRSTVI NT seq 4443 nt NT seq  +upstreamnt  +downstreamnt atggacaagctagccacaaccaagattgtgaaagtagaggggggatctggagggtctgga aaagaaatccagaaacacacagaaactgtaacaaccacaagactaacatctctaccccca aagggcaacagcagctccgtgagcagccaacaggtactgacctccatagtgaacagctca ggctctggaggagcttcaggaggagctgttctggtggagaagaagatcatcacccagagc agtgctgaaggaggcacttccagaagttatgtcatatcctcctcctcatctggaagttca gccagcagcagttcaggagcgggatctgtgatcagcggattcaacgaaatatctcgtgaa atcagtgtagccggaccgatcagtagctctatggttaaaagttctagctctgcagttaaa agctctagcggcatctctaccaccatcacaacagttggcagttcctctgcaacaggtgga gatctttcttctggatacgggtccatctcctcctctgagtttgtgtcgggatcttcaggt ggttctgttagtatttctggaggcagtatgaacatttccagaggtggaggaggtggcggt ggctcctctgccttcatgtctgccggaggaacatccagctccatgactgtgaccaagttc agctcctcgtcgcctagcggaacgcggaaaggtttgagttacagcacagttcctacagag aggaagactagtctgagccttcacgctggaggatatgaggggagctccagtggcaattct tcccctgaatacataaagaaagaatacgtttcgacaagtgttgccactagaggacgcaca caaacacgagagagtgagatcagagccagactgcagagcgcctcaccctccactagatgg acagagctggatgatgtgaagagattactgaagggaagtcgctccgggagcatcagtcca cctcgttcacccacgaacactctacctatcccgaaaaaagccagtgtggacacgcgtcat gagagccagtcaggttgtgacggcacagtcctggatgctggattcagcggatattacacc aacccaaacaatctcagttacaccacactgcaacaaccatcgtcacccacaggtggcatg cagaataatctgaccctcagctcctctgccctcggtagtgcagtatatgggatgcataat aacctgtcgacatctggtggtgctctcatggttaatggaatcagtgctggccaagtgtat ggggcacagaagaatgttggcagcgccggattggccaccactattactactgttcccagc agccctatcaccgctgatgacgtgtttgtgaaagatggcaagtttgttgcgattggaaaa gaaaatgtagcagctaagaaagagactgagagactgatcatgtccaaaaacactggcaaa cagttcgtcacttccaccaccagtgctggagcagattctgaagattcactcaaaagggag aaaaagatgatctccagcaccactgaatccacaataactgcttccagagcttcaacaaaa gacaaggcaacctatgcagagatccgtaaagacgattcagatggtgcaggacttggattt tgttcctgctgctcatggtggaagtggcttctggcattgattttaggtcttcttcttctg ctgggacttctctgtggtctcatcgcactgggcgaggaggttcggaagctgaaggctcgt gtggatgctattgatggtggagaaaacgcagtctctgctcgaaccagtcgtttttccgcc tcctcggctgtcaacatcattgatccacttgagtcttcatacgctgagcgcatccctggt gtccgtgccgataacactataaacctgggttcagcatctgctccacaggaccctgttatt ctgcagaggaccatccaacagatcctcagatctgagcttcagtcggacaccattagagct tcactggcaacttcacttaagggtgagagaggagaacctgggcctaaaggagaccaagga cctcctggagttaaaggtgatacagggtttcctggaattccaggtcctcctggcctcatt ggtcaccctgggcaggaaggtcctcgaggacccaagggaagtgcaggtgaatcaggaaat gatggtttacctgggccgaggggtcgagaggggccagcgggtcccagaggagaaccggga ccctcaggaattggagagaaaggagagaaaggctcatctggcgatgttggtgcacctggg ctagcaggaccacaaggccctgtgggaccaaaaggtgacgcaggtgcacaaggcatacca ggtcttcaaggagctcctggaccccaaggcttccgtggagattctggtgatcctggaccc aagggtgataaaggacctgctgggccacctggggttaaaggtgatcacggagagagaggg ccacgtggtgccactggcgagccaggtcaggccggaccagcagggcctcctggtgagaaa ggccctaaaggatcagcaggtgctcctgggccagatggtgttaaaggaattcgaggtgat caaggtccgattgggttgcctggagctcgtggaccctcggggcctcctggagatgcagga ataccaggtgcaccaggactccaaggaccaccaggattgccaggtactccaggccagcca ggatctaaaggtgagcccggtgagcccggaagagtcatttctgcaggcgctaatactaac actgtgggtgtacctggaccacctggacctcctggagctccaggtcctgccggagcacct ggactatcaggtcctattggtcctgctggtcttcctggtccacctggtgcaaagggagat agaggagacaaaggagaagatgggaagcctggagtctctgagagtgcaggaaagaaagct gcttctgaacctggtcctcctggcccacctggtccaccaggaccgcctgggaatgatgga aaaccaggtgttggtcaacctggtcctcctggtgaaaaaggtgaacctggaagctttgta cccacttcagaaaccttctttgctggaccacctgggcctcctggacctgttggaccaaag ggatcacaaggtgatattggtcctcaaggtttccctggccagcctggattacctggagaa cctggaattggtattccaggacaaccagggacaccaggaccacgtggagaacaaggtcct gagggtccaccaggaccacagggacctcaaggaccactgggtcccatgggaccagaaggt ccaaaaggtgatgctggagtcccaggggcccctggcattccaggatattcctacggtgga ggatccagaagcgctccaggaccaccaggtccacctggacccccagggcctcctggagca cctggttcagggggtggcggctcaccagatgttgttcaacagatttcagactacctcaga agtgaacccattagagaatacctggctggacctccaggcccacctggaccaccaggacct cccggatcaggctctgaagattcgctggctaaccgtgtcattgaataccttcaaagagat gaggtgaggcagtacctcattggtcctccagggcccccaggacccccaggtgtgccaggt ggatatggctttaacactcaggaagttgctggacgtgtgttgagactgatgaacgatggt ggtttaagaggcctgccgggacctcccggtcccccaggacctcaaggaccaccaggaagc tccggaggactagtgtcttacgccgttaacgaaaaccaacagcaaatccgcgcagaacct caggaatttatcaaaaggcacccaagctctaatgagaatttggattacgcagcaatcgct aaacaggtttctgattatattaagtctaatggcctgttacaaggcctagatggtttgaca gggaatccaggtccacgaggtccacctggtccaccaggttttccaggactcaatggagtc cctggaccccccgggcctccaggaaccagcattgatttttcttccaccaacatgactccg atcatagactatatcagagaacaccgcatgaatggaccaccaggtgtaccggggcagaaa ggagagccgggaaatcctggatcagcaggacaaacaggtgacagaggattccctggtcca cctggcttcacaggcgtcccaggaatgaaaggagaaaagggactgaacggctttccaggc tctccaggcttacaaggctctccaggaatgaaaggagaaaagggagacaggggcttttca ggctctccaggctatccaggcttacaaggccctacaggctctccaggaatgaaaggagaa aagggagagaggggtgagccttcatatgtcactcgtcggaagaggaggagcacagtcatt tag

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