Labeo rohita (rohu): 127165016
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Entry
127165016 CDS
T09007
Symbol
nipbla
Name
(RefSeq) LOW QUALITY PROTEIN: nipped-B-like protein A
KO
K06672
cohesin loading factor subunit SCC2
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
127165016 (nipbla)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127165016 (nipbla)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
127165016 (nipbla)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd1
ARM_ECM29
Cnd3
Motif
Other DBs
NCBI-GeneID:
127165016
NCBI-ProteinID:
XP_050965214
LinkDB
All DBs
Position
5:41956052..42001580
Genome browser
AA seq
2370 aa
AA seq
DB search
MNGDMPHVPITTLAGIAGLTDLLNQLPLPSPLPGTTTKSLLYNGRVAEEVGHLMGCRDET
LVSQLASGLSQVSTEHIELKDSLGSDELEGDVPVLLQLLLSRNPNIFRNKTAPSTPQYPA
QAGISQQSMAPPYKITHGSMQGSPASANYQASMSHSPSGRFVPGQSGSGGRFLPQQSSPV
PSPYAPQSPATGYRQYPHPPAYSQHQHLQQGSVASPMIPGGMRNVHENKDQMRAGFTSHI
LQSSPPYTPPCDGAQELHLGSPDKQRGLKPNEGERDPADKATVYDIVGSPTKDPTKLILR
QSRGRAADVDLGGMYPGSDPEGELVEALAAIERMESEAAMETERGAKEVQDKDKPLKKRK
QDSHPQEPGAAGTAGSGSGAPGGGGGANAGHRLAPQEASAAGTSASRPGLQVSLEQAGRV
EDACMGMPIPASEAQRWPQEPQEGVTPKALKHKHDHAPEHRHQPDTPRQKHRPEGRHGDV
GTQRAAQSGSKPAELPPYMLGENTSSGVLKNFTIPKIRKDLGTGDIPEGWKQPCVRLERL
EPEVDVKKTVKPVVVLQKLSIDEVQRFMRERDSRGSKSGKNRLSSGRSGKGGIDPSVLKD
LPPELLAEIESTMPLCERVKMNKRKRSTVNERPKYAEDSSEDEEYSSRKRQKKDRDRTWE
LEERDRRSSGEHRRGSYDARRGSGSRFDDSDQDSPPPSLSDVARRLKSKEKQKKRKAYEP
KLTPEEMMDSSTFKRFSLSIDNILENLEDVDFNAQDDDEIPQELLLGKQQLSELGSESAK
IKAMGITCRIPSDKLVKLLNILEKNILDGASLSTLMNLDNDGEDEERLWRDLIMERVTKS
ADACLTALNVMTSLHMPKAVYIEDVIERVLQYTKFHLQNTLYPQYDPVYRIDPKGGSMLS
SKAKRAKCSTAKQRVIVMLYNKVCDVVSNISELLEIQLMTDTTILQVSSMGITPFFVENV
SELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDAEGEPIYI
QMVSALVLQLIQCVVHLPSEKDTEDDHKKVDDDVFITNSYETARRTAQNFLSVFLKKCGS
KQGEEDYRPLFENFVQDLLSTVNKPEWPASELLLSLLGRLLVHQFSNKQTEMALRVASLD
YLGTVAARLRKDSVTSRMDQKAIDRIIRESSEGDETQRLQKALLDYMDENAETDPALTFA
RKFYIAQWFRDCTTEAEKAMKSQNQKEEDSEGTQHAKELQATGDIMQRAETRKKFLHTVI
KSTPNQFTTLRMNSDTVDYEDACLIVRYLASTRPFSQSFDIYLTQILRVLGESAIAVRTK
AMKCLSEVVAVDPSILARSDMQRGVHGRLMDNSTSVREAAVELLGRFVLSRPQLTEQYYD
MLIERILDTGISVRKRVIKILRDICLEQPNFSKITEMCVKMIRRVNDEEGIKKLVNETFQ
KLWFTPTANHDKETMNRKILNITDVVAACKDTGYDWFEQLLQNLLKSEEDSSYKPARKAC
VQLVDNLVEYILKYEEALAEHKSVNSTRLVACITTLYLFSKIRAQLMVKHAMTMQPYLTT
KCSSQSDFMVICNVAKILELVVPLMDHPSESFLTTIEEDLMKLILKYGMTVVQYCVSCLG
AIVNKVTHNYKFVWACFNRYYGALTKLKIQHQEGTNSMALAATKAALLRSLFTVGALCRH
FDFDLEQFKGTTKVVIKEKVLESLLYFTNHEDEEVKCKAIIGLGFLLIMHPSQMFVPEVK
SLYNGLLSDKRSSITLKIQVLKNLQMYLQEEDSRMQEADREWQKMSKQEDLKEMGDISSG
MSSSIMQLYLKQVLESFFHTQSSVRHFALNVIALTLSQGLIHPVQCVPYLIAMGTDPEPT
MRNKADQQLVEIDKKYTGFIHMKAVAGMKMSYQVQQAVLGSTGPVIRGFRQDESNSAQCS
HLYSMVRANRQHRRAFLISLLNLFDDSSKIEVNMLLFIADNLAYFPYQTQEEPLFIMHHI
DITLSVSGSNLLQTFKESLVKIPGRKSRKRRRRRRRQTQHQPQQQHQNGSEEDRGEQDEE
RERNSGDEDYNDDDYEEDEEGQRVRKPKPTECPKQSESDSDSDLDDADAVMERLPEDAAS
LLDFARASQGILLLLVLKQHLKNLYGFSDSKIQKYSPTESAKVYDKAVNRKTSVNFSPRQ
TIDFLQNDEVHDEMTYDLKRKIVKQYLDFKLLMEHLDPDEEDEEGETSATVRNKAITALL
GGAATSPRNHHTVDSEDEDSEGEERTPGASRRGRRAADSADLLLTNMNESVSALDIIAIH
CPKYRDRPQIARVIQRNSDGYNIHWMAGSYSSSWTEAKRRDGRKLVPWVDTIKETDIIYK
KITLTSGNKLNHKVAQTLRSLYAAKDRNSS
NT seq
7113 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggacatgccacatgtgcccatcacaacccttgctgggattgctggtctcact
gacttgttgaaccagctgcccctgccctcccctttaccgggcaccaccactaagagcctg
ctgtacaacgggcgtgtagctgaggaagtggggcatctgatgggctgcagggatgaaact
ctggtctctcagctcgccagcggcctcagccaggtctccacggagcacatagagctgaag
gacagccttggcagtgatgagttggagggagatgtgccagtgctgctgcagcttttgctg
tctaggaaccccaacatcttcaggaataagaccgcacccagcactccccagtatccggcc
caagcgggtataagtcagcagtcaatggcaccgccgtataaaatcacgcatggttccatg
cagggaagcccagcttctgccaattaccaagcctctatgtcccacagcccctctgggcgt
tttgtgccggggcagtctggctctggtgggcggtttctgcctcagcagagcagcccagtg
cccagcccttatgcccctcagagccctgctaccggctacagacagtacccacaccctcca
gcctacagtcaacaccagcacctacagcaaggttcagtagcaagcccgatgattcctgga
ggcatgagaaatgttcatgagaataaggatcagatgagggcgggtttcacatctcacata
ctgcagtcatctccaccttacactcctccttgcgacggggctcaagaactgcatctgggc
tccccggacaagcagcgcggtctaaagcccaacgagggagagcgtgacccggctgataag
gctacagtgtatgatatcgtgggctcgcccacaaaagaccctactaagctaatcttgagg
cagtcacggggcagggcagcagatgtggaccttgggggaatgtatcccggttcggaccca
gaaggagaacttgtggaggcacttgccgcaatagaaagaatggaaagcgaagcggccatg
gaaacggaacgtggcgctaaagaggtgcaggataaagataagcctttgaagaagcgcaaa
caggactctcacccgcaggagcctggcgcagctggcacagctggttcaggctctggggct
ccaggtggagggggaggggctaacgcagggcataggctcgcccctcaggaggccagcgcc
gcgggcaccagcgccagccgcccaggcctgcaagtgagcttggagcaagcgggcagagtg
gaggacgcctgcatgggcatgcccatccctgccagcgaggctcagcgctggcctcaggag
ccgcaggagggcgtcaccccgaaggcccttaaacacaagcatgaccacgctccagaacac
cggcatcagcccgataccccgcggcagaaacacagacccgagggccggcatggtgacgtc
ggcacgcaacgtgcggctcagtctggaagcaaaccagccgagcttcctccatacatgctg
ggtgaaaacaccagctcgggagtgcttaagaacttcaccattcccaaaatcaggaaagat
ctcggaacaggagatattccagaagggtggaagcagccgtgtgtgcggctggagaggctg
gaaccagaggtggatgtaaagaagactgtcaagcctgtggtcgttctgcagaaactctcc
attgatgaagttcagcggttcatgagggaaagagactcgcgcggctctaagtctggcaag
aacaggctgtcctctgggagatctgggaaaggtggaatagacccgtcagtgctgaaagat
cttcctcctgagctgctggcagagatagagtccaccatgcctctgtgtgagcgggtgaag
atgaacaaacgcaaacgcagcactgtcaatgagaggcctaagtatgcggaggacagctct
gaggacgaggagtactcatctcgtaaacgccagaagaaggatcgtgacagaacgtgggag
ttagaggagcgcgaccggaggagttcaggagagcatcgaagaggaagctatgacgcacgt
agaggctcaggcagccgattcgacgactctgaccaagattcacctcctcccagccttagt
gacgttgcaagacgtttaaagtcaaaggagaagcagaagaagaggaaagcgtatgagccc
aagttaacacctgaagaaatgatggactcttccacttttaaaaggttctcgttaagtatt
gacaacatcttggagaatcttgaggatgtggactttaatgctcaggatgacgatgaaatt
cctcaggagctgttgttggggaaacagcagctaagtgaattaggtagtgaatctgctaag
ataaaagccatgggcatcacctgcaggattccttctgataaactggtgaaactgttgaat
attctggaaaagaacattctggatggagccagtctttcaacactcatgaatctcgataac
gacggagaggacgaggagcgtctctggcgggatctcatcatggagcgtgtgaccaaatca
gcggatgcgtgtctgacagcactgaacgtcatgacatcattacacatgcccaaagccgtg
tacattgaggacgtgatcgagagagttctgcagtacacgaagttccacctgcaaaacact
ctctacccgcagtatgatccagtctacagaattgaccctaaaggaggttccatgctgagc
tccaaagcaaagcgagccaagtgctccaccgccaagcagagggtcatcgtcatgctctat
aacaaagtgtgtgacgtcgtcagcaacatctctgagctgctggaaattcagctgatgacc
gatacgacaatattgcaggtctcttcgatgggaatcactccattctttgtggagaatgtc
agtgagctgcagctgtgtgccataaagctggtgacggcggtgttctctcgttatgagaag
catagacagttaattctagaggaaatctttacctctttggccagactgcctaccagcaaa
cgcagcctcaggaacttcaggttgaacagtagtgatgctgagggtgagcccatatacatt
cagatggttagtgctctggtgctgcaactaattcagtgtgtagtccacctgccttctgag
aaagacactgaagacgatcacaagaaggttgacgacgatgtgttcatcaccaactcgtat
gaaacggccagacggacggctcagaacttcctttctgtcttcctcaagaagtgtggcagt
aaacagggtgaggaagattacaggccgctgtttgagaatttcgtgcaggatctgctgtct
acagtcaacaaacccgagtggcccgcttcagaattactgctaagcctgctgggtagatta
ctggtgcaccaattcagtaacaagcagacagagatggcattgagagtggcatcactggat
tatctgggtactgtagcagccagattgagaaaagattctgtcaccagcaggatggaccag
aaagccatcgaccgcatcattagagagagctcagagggagacgagactcagcggctacag
aaagccttattggattatatggatgaaaatgcagaaacagaccctgctctcacatttgca
cgcaaattttacatcgctcagtggttcagagactgcactacggaggctgagaaggccatg
aagagtcaaaatcaaaaggaggaggactctgagggcacgcagcacgccaaagagctccag
gccaccggagacatcatgcaacgtgcagaaactcgcaagaaattcctccacaccgtcatt
aaatcaactcccaatcaatttactactctcaggatgaattcagacactgtggattatgag
gatgcctgccttatcgtacgctacttggcctccaccagacccttctctcagagctttgac
atctacctgacacagattctgagagtgttaggggagagcgctatagctgtcaggaccaaa
gccatgaagtgtttgtctgaggtggtggctgttgatcccagtatactggccaggtctgat
atgcagcgtggtgttcatggccggttgatggataactccaccagtgtgagggaagcagcg
gtcgagctcctgggacggtttgtgttgagtcgacctcagctgacagagcagtactatgac
atgctcattgagaggatactggacaccggtatcagcgtgaggaagagggtgatcaagatt
ctgagagacatctgtttagagcagcccaacttcagtaagatcacagagatgtgcgtgaag
atgatccgcagggtcaatgacgaggagggcatcaagaaactggtgaatgaaacattccag
aagctgtggtttacaccaacagccaaccacgacaaagagacaatgaataggaagattctc
aacatcactgatgtggtcgctgcctgtaaggacactggctatgactggtttgagcaactc
ctgcagaaccttttaaagtcagaggaggactcatcttataagccggccaggaaggcctgt
gtgcagttggtggataatcttgtggagtacatcctcaaatacgaggaggcacttgcagag
cacaagagtgtgaactccacacggttggttgcatgcatcaccacactgtatctgttcagt
aagatcagagcgcagctgatggtcaagcatgccatgactatgcagccctacctcaccacc
aagtgcagttctcagagtgacttcatggtgatttgtaacgttgcgaagatcctggagctt
gtggttcctctgatggatcaccccagcgagagcttcctgaccaccattgaagaagacctg
atgaaactcatcttaaaatatggcatgaccgttgtccagtactgtgtgagctgtttgggt
gcgatagtgaataaagtgactcataattataagtttgtatgggcctgttttaaccgttat
tatggcgctctgactaagctaaagatacagcatcaggagggtacgaacagcatggcactc
gctgccaccaaagcagccctgctcagatctctctttactgtgggagctctctgcagacac
tttgacttcgacctcgagcagttcaagggcaccactaaggttgtgataaaggaaaaggtt
ttggaatcattactgtacttcacaaatcacgaggatgaagaagttaaatgcaaagccatc
attgggttggggttcctgttaatcatgcacccaagtcagatgttcgttccagaggtgaag
tctctgtataacgggctcctgtctgataagcggagctccatcacgctaaagatccaggtg
ttgaaaaacctccagatgtatctccaggaggaggactctcgcatgcaggaggctgacaga
gagtggcagaaaatgtcaaagcaggaggatttgaaagagatgggtgacatctcctctggt
atgagcagctccatcatgcagctctatttgaagcaggtgcttgagtctttcttccacacg
cagtccagcgtgcgacacttcgccctcaatgtcatcgctctgaccctcagccagggactc
atacaccccgtacagtgtgtgccatatctgatcgcaatggggacggacccagagcccacc
atgaggaacaaagcggaccagcagctggtggagattgataagaaatacactggattcatc
catatgaaggctgtagcaggcatgaagatgtcgtaccaagtgcagcaggccgtcttggga
tcaacaggacctgtgatccgtggtttccgtcaggacgagtccaattccgctcagtgttcc
cacctctacagcatggttcgcgcgaacagacaacaccggcgagcgttcctcatctcactg
ctcaatcttttcgacgacagctcgaagattgaggtgaacatgctattgttcatcgctgat
aatttggcgtacttcccctatcagactcaggaggagccgctgttcatcatgcatcatata
gacatcacactgtctgtgtcaggcagcaacctgctgcagacatttaaagagtctctcgtt
aagattccgggcaggaagagcaggaagaggagacgacggcggcggcggcagacacagcac
cagccacagcaacagcaccagaacggttcggaagaggacaggggagagcaggacgaggaa
agagaaaggaacagcggagatgaagactataatgatgatgattatgaggaggatgaggag
gggcagcgggtgaggaagcccaagcccacggagtgccccaagcagtcggagtcagattct
gattctgaccttgatgatgccgatgctgtcatggagcgtctgcctgaagacgcagcgtct
ctcctggactttgctagggcatcacagggcatactgttactgctagtgctcaaacaacac
ctcaagaacctctacggcttctcagacagcaaaattcaaaagtactctcccacggagtca
gcaaaggtgtacgataaagccgtcaacaggaagacgtcggttaacttcagtccacggcag
accatcgacttcctccagaatgatgaggttcatgatgagatgacctatgatctgaagagg
aagattgtcaaacagtaccttgactttaagttgctgatggagcacctggaccctgacgaa
gaggacgaggagggagagacgagtgcaaccgtgaggaataaagccatcactgcactgctc
gggggagcagccacaagcccccgaaaccaccacactgttgactcagaggatgaagacagt
gaaggagaggagaggacaccaggggcgtctcgacgcgggaggcgcgcggccgactcggcg
gacctgctgttgacgaacatgaacgagtccgtcagcgcgctggacatcatcgccatccac
tgccccaaataccgagaccggccacagatcgcacgcgtgatccagaggaacagcgacggt
tacaacatccactggatggcgggctcgtactccagctcctggaccgaggcgaagcggcgc
gacggacgcaagctggtgccgtgggtggacaccatcaaagagactgacatcatctacaaa
aaaatcacactcaccagtggcaacaagctcaaccacaaagtggcgcagactctacggtca
ctctacgctgccaaggacaggaactccagctaa
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integrated database retrieval system
