Labeo rohita (rohu): 127165053
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Entry
127165053 CDS
T09007
Symbol
brwd3
Name
(RefSeq) bromodomain and WD repeat-containing protein 3 isoform X1
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127165053 (brwd3)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
127165053 (brwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Bromodomain
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF12
Beta-prop_SCAP
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
127165053
NCBI-ProteinID:
XP_050965282
LinkDB
All DBs
Position
5:complement(33138205..33162594)
Genome browser
AA seq
1736 aa
AA seq
DB search
MAAEPCSQIEAELYYLIARFLQSGPCQKSAQMLLQELHEYEIIPKRWSWDGKQFKRSFED
WVLLNQHIPADYLLRVCEQIGPLIDKHIPPSVPGVHSLLGTGRQSLLRTAISSSHTVWSG
SAVVALHRGRPPEPPLNCAKPPNIVSIMGARQKTGVARFGQAFPSCTYQHMKMHRRILGH
LSSVYCVAFDRTGRRIFTGSDDCLVKIWATDDGRLLATLRGHAAEISDMTVNFENTLLAS
ASCDKIIRVWCLRTCAPVAVLQGHTASITSIQFSPSALGSSRHLATTGADGMVCFWQWNS
LSMKFDDRPVKFMERSRPGVQISCSSFSSGGLFLATGGTDHVIRVYYLGTETPVKFSDLD
SHTDKVVAIQFCNNTDSLRFVSGSRDGTARIWHYQQQEWKSTVLDMTTRLPGSAVISGDD
KSTKLVVTMVAWDRCDRSIITAVSNCLLKVWNSANGQLLHVLSGHDDEVFVLEAHPFDSR
ILLSAGHDGNIYIWDLSKGHKIRNFFNMIEGQGHGAVFDCKFSVDGQHFACTDSHGHLLI
FGFGCSQPYEKIPDQMFFHTDFRPLIRDSNNFVLDEQTQQAPHLMPPPFLVDVDGNPHPP
RYQRLVPGRENCKEEQLVPQLGYMANGDGEVVEQVIGQQTAEDSQEESPLDDLIRQLQHQ
QDERLNSGNPTVGAEVAGGPLSPPNVGLRRSGQVEGVRQMHNNAPRSQIATERDLLAWSC
RVVVNEVQSGTFRVMEDSRRAKGEVERSMYNIDKKKKSAPTTRSEPAGESVRTLRRPQRK
AQQRRHTYQTRSTRERRRSTSVPSYTHNEESVAESDSEVEQEEEQNENSDVSSDGEAQWE
NDSSSSDSSSEYSDWTADAGINLQPPKRTTRRPARVATTSSSEDEEGTGQGEGEAERTSK
RTEKKKKPKQTKQRSVPAGDLDEWLPPSWIMETIPRRSPFVPQMGDELIYFRQGHQAYVR
AVCRAKAYSINPQKQPWNRLNLRDQESVKVVGIKYEVGPPTLCCLKLALLDPTSGKMTNE
SFSLKYHDMPDVIDFLVLQQFYNEAKERNWQPGQHFRSIIDDAWWFGSVECQEPFQSEYP
DSLFQCYIVKWDNGEREKMSPWDIEPILEEAPLPEEHGGSVPVTEDELQALLYTPQEGEW
GMHTRDDECERVITAIDQLLTLDVAKAFASPVDLREYPLYCTVVAYLTDLSTIRTRLVHR
FYRRISALMWEVRYIEHNARTFNEPQSPIVKAAKTVSNVLLRFIRDQTCTDILDLYNTMK
SEFSSEEEEEEIVDVDSDTPGTSTGQRRSNNVPQKRGVVLDINAWHGQCKELLRRMMASS
DSEPFRQPVDLFAYPDYRDIIDTPMDLGTVSETLMGGNYENPIEFAKDVRLIFSNSKAYT
PNKKSRIYSMTLSLSAFFENQIIPIISDYKSAVQNQRRSQQRLKRLQSSYPNSPKGKQKS
GKKTSQGSAKARSRKSSQDLNVAQIDEDSQPSSSSSSSSSSSSLSFSSEQPGANRVTRSR
VTPSKSSGGNGILSNGGRSSRRRTAALTEEGEVSECESTSSSSSSTSASSSSSGTSSSSS
ESDDSGAEVGGFADGGDHDYSKAPQHQQKGKAPAPSVDNTKRKRKGETQTTPVKRARRAN
ERDEEEEEPEEEEEPEEEEEPEEEEEELDEEEEESEEEDDDVSSSTKTGSQRSNQRTPKS
GRVNTRNQGRRTVLYNDDSEDEGPTTDPLNLGMSRSGRVRRMTERARVSHLMGWTH
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaaccgtgctcgcaaattgaagccgaactttattacctgatcgccagattc
ctgcagtctggaccatgtcagaaatccgctcagatgctgctgcaggagctgcacgaatat
gagatcatcccgaagcgctggagctgggatggaaagcagtttaagcgaagctttgaagac
tgggtcttgttaaatcagcacatacctgcggattacctgttgcgtgtgtgtgagcagatc
ggcccattgatagataaacacattcctcccagtgttcctggagtccacagtttactgggc
accgggcgacagtcattgctacggactgcaataagttcttctcatacagtatggagtggt
tctgcagtagttgccttgcacaggggacggcccccagaaccacctctcaactgtgccaaa
ccaccaaatatagtgtcaatcatgggtgctcgccaaaaaacaggagtggctcgatttggc
caggctttcccctcctgtacctatcagcacatgaagatgcatcgaaggattctgggccat
ctctcatcagtttactgtgtggcgtttgaccgcactggacggcgcatattcacgggttct
gatgactgtctagtaaagatctgggcaacggatgatggccgtctcctagccactctgcgc
ggacacgcggcagagatttcagacatgacagtgaatttcgagaacacgctccttgcctcg
gccagctgtgacaagatcatccgcgtgtggtgcctgcgtacctgtgcacctgtggcagtg
ttgcaggggcacacagcctctatcacctccatacagttttctccatcagcattaggttct
tctcggcatctggccaccactggagctgatggaatggtgtgtttctggcagtggaactca
cttagcatgaagtttgatgatcggcccgtgaagtttatggaacgttctcgtcccggagtt
cagatatcctgcagctccttcagctctgggggattgtttctggccactggagggaccgat
cacgtgatcagggtttactacctcggcacagagacgcctgtgaagttttctgacctggac
tcccacacggataaagttgtagctattcagttctgcaataacactgacagtctcaggttt
gtaagtggtagtcgggatggtacggctcggatttggcattaccaacagcaggagtggaag
agtaccgtgctggacatgaccaccagattaccagggagtgctgtgatatcaggcgatgac
aaatcgaccaagttggtggtgaccatggtcgcgtgggatcgttgcgatcgttccatcatc
acagccgtttcaaactgcctcctcaaagtctggaactcagcaaatggccaattactacat
gtgctgtcgggtcatgatgatgaggtgttcgttttggaagcgcacccctttgactcacga
atcttgttatcagccggtcatgatggtaacatctacatctgggacctcagtaaaggccac
aagatcagaaacttcttcaatatgattgaggggcagggtcacggtgctgtgtttgactgt
aaattttcagtggatgggcagcactttgcctgcacagactctcatggtcatctgctcatc
ttcggatttgggtgcagtcagccttatgaaaagattccagaccaaatgttcttccatacg
gatttccggccgctgatccgggactccaataactttgttctagatgagcagacgcagcag
gcacctcatcttatgcctccgccttttctggtagacgtagatgggaaccctcacccacct
cgttaccagcgactggtgccgggcagagaaaactgcaaagaggagcagcttgtgccacag
cttggctacatggctaatggtgatggtgaagtggttgagcaggtgattggccagcagact
gcagaggactctcaggaagaaagcccattggatgacctgattaggcagctccagcaccag
caagatgagcgactcaactcaggaaatcctacagtaggtgctgaggtggcaggtggtcct
ctgtcaccccctaacgtcgggctgcgacgtagcggacaagttgagggtgtacggcagatg
cacaacaatgccccccgcagtcagatcgccactgagagagacctgctggcgtggagctgc
cgcgtagtggttaatgaagtccagtctggcacattcagagtgatggaagatagtaggcgt
gctaaaggagaggtggaaagatctatgtacaacattgacaagaagaagaaatcagcaccc
acaacgagaagtgagccagcaggagagagcgttcgcacgttacggaggcctcagcgtaaa
gctcagcagaggagacacacgtatcagacccgctcgactcgagaaaggagacgcagcaca
agtgtgccctcgtacacccataatgaggaaagtgtggcagagtccgacagtgaagtggag
caggaggaggaacagaatgagaacagcgacgtgtcctctgatggtgaagctcagtgggag
aatgacagtagctccagtgactcttctagcgagtattctgattggacggcggatgcggga
atcaacctccagcctcctaagcgaacaactagaagaccggcccgtgtcgccacgaccagt
agctctgaggatgaggaggggacggggcagggagaaggagaggctgagagaacgagtaaa
cgaactgaaaagaaaaagaaacctaaacagactaaacagcggtctgtgcctgctggagat
ttagatgaatggttgcccccatcttggatcatggagacaattccaagacgatcacctttt
gtacctcaaatgggagatgagttgatatacttccgtcagggtcatcaagcatatgtccga
gccgtgtgtcgtgccaaagcctacagcatcaaccctcagaaacagccctggaaccgcctg
aacctcagggaccaggagtctgtaaaggtagtgggtattaaatatgaagtcgggccgccc
actctgtgctgcctcaaactggcactcctggaccccacctcagggaaaatgaccaacgaa
tccttcagcttgaagtatcatgatatgcctgatgtcattgactttctggtgctacaacag
ttttataatgaggccaaagaacgcaactggcagcctggtcagcatttcaggagcatcatt
gatgatgcttggtggtttggttcggtggagtgtcaggagccatttcagtcggaatatcca
gacagcctctttcagtgctacattgtcaagtgggataatggagagagagagaagatgagt
ccgtgggatatagagccaatacttgaagaagctccacttccagaggagcatgggggcagt
gtcccggtcacagaggacgagcttcaggccctgctgtacacccctcaggagggagagtgg
gggatgcacacacgagatgacgagtgcgagagagtcatcacagccatagatcagctgtta
acgctagatgtggcaaaggcattcgcctcccctgtagatttgagggaatatccgctgtac
tgcactgttgtggcctatctcactgacctcagcaccatcagaacaagattagtgcaccgc
ttctacagacggatctcagcattaatgtgggaggtacgttacattgaacacaacgctcgg
acatttaacgaaccgcagagccccattgtcaaggcagccaaaacggtcagcaacgtcctg
ctgcgttttatcagggatcagacctgtactgatatcttggatctgtacaatacaatgaag
agtgaattcagcagcgaagaagaggaagaggagattgtggatgtggactcggacactcct
ggcacctccactggtcagaggaggtccaataacgtgcctcagaagcgtggtgtggtcctg
gatataaacgcatggcacggacagtgcaaagagcttctgaggagaatgatggcaagctca
gattcagagcctttccgccaacctgtcgacctcttcgcctacccggattatcgtgatatt
atagacactcctatggatttaggtacagtctccgagaccttgatgggtgggaactacgag
aatcccattgagtttgccaaagacgtgcggcttatcttcagtaattcaaaggcttacacg
cccaacaagaaatctcgaatctacagtatgacactgagtctgtctgcgttttttgagaat
cagatcattcctattatctcagactacaaatctgcagttcagaatcagcgtaggagtcaa
cagagactcaaaagattacagagttcctatcccaacagtcccaaaggaaaacagaaatca
ggaaagaaaacttcccaggggtctgcaaaggcccgctcacggaaatcctctcaagatttg
aatgttgcacaaattgatgaagacagtcagccatcctcttcatcctcatcctcttcctcc
tcatcttccttgtccttttcatcagagcagccaggagccaacagagttacacgcagccgt
gttacaccaagcaaatcctcaggtggcaatggtatactgtcaaacggaggtcgaagttca
cggcggagaacggccgcattaaccgaagagggagaggtctctgaatgtgagagtaccagc
tcatcgtcatcttcaacatccgcgtcatcgtcctcttccggaacctcatcgtcttcgtcc
gagagtgacgacagcggggctgaggtgggcggctttgccgacggtggcgatcacgactat
agcaaagccccgcaacaccaacagaaaggcaaagcaccagcgccctccgtcgataacaca
aaacgaaagcggaaaggagaaacgcaaacaacacctgtgaaacgagcacgccgagcaaac
gaaagagacgaagaagaggaggagcccgaggaagaggaagaaccagaggaagaggaggaa
cctgaagaggaagaggaggagctcgatgaggaagaggaggagtcggaggaggaagacgat
gacgtttcgtcatcaacgaaaactggaagtcagaggtcaaatcaaaggactccgaagtcg
gggcgggttaatactcgtaaccagggtcgaaggactgttctgtacaacgatgactctgaa
gatgaggggccgacgacagacccgctgaatctaggaatgtcacgttctggaagggtccgt
cgcatgactgagcgtgcacgggtcagccatcttatgggctggacacattga
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