Labeo rohita (rohu): 127165067
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Entry
127165067 CDS
T09007
Symbol
arhgef12b
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04270
Vascular smooth muscle contraction
lroh04625
C-type lectin receptor signaling pathway
lroh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
127165067 (arhgef12b)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
127165067 (arhgef12b)
09153 Circulatory system
04270 Vascular smooth muscle contraction
127165067 (arhgef12b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127165067 (arhgef12b)
Membrane trafficking [BR:
lroh04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
127165067 (arhgef12b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
127165067
NCBI-ProteinID:
XP_050965304
LinkDB
All DBs
Position
5:complement(9994347..10092918)
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AA seq
1462 aa
AA seq
DB search
MLIFFLKFFFYSKTLIIFACLASTLSYSCGIPSACQTCERFPKKASRTGSILSKDHPPDK
KPKSDKASVPPSHEFDPTGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKEDGAAMRAGV
QTGDRIIKVNGTLVTHSNHVEVVKLIKSGSYVALTVLGRPPGLPQIPLSDGEGEEGPLFS
FTSPHSPGPIGPDRSSSSPSPSERKPTPLPVWAMTEEQSRNPTPKLLKEIQDTKKHIPQN
QEQLSKPTGTGQDGSLSPRPGEGEQEDGGGDSYRPPSWQGDAGMEPPWTNNTTTPVTPSP
VPESPCQRETPCHSPKTTPRDSLNSCPSPDAEDTPDLDSQSSVGSPSSRPVAHIIGAEDE
DFDTEQEQMNGQCSCFQSIDLLKSRPAHLAAFIHHVVSQFDPAPLLCYLYAEFYKQTSSK
ETRRFLMDTFFIDKTASLKVTVPESIIADLERTAHSINAERKRPEPISEDVHRQYVQQLQ
DTLLPDIQKNLEDFRHKRSMGLTLAEAELARLDTERMRDRVALEKERSCAEHIISKIEDV
LLTSQATEEDKCSTMQFVIVSYMKQLGVKVKESRGLEHKPKLMNLFPKIKKTIKLEKDGS
EEKSKKRFPSVFPQRRPSRNDASALSRALEPRQRPSKPQLPLGTGEQADGSSPPIRGSQS
SEGSDGTTALVTSPPYSAPAAQGTDGISRESETGGLPSSALPRLGDGVVPGDSQESSSSN
THFDFNVGTLEHLQEEEAETDKTQDTGTPRPDRSRMEPLGSGDVQSEDDQGAEVELEPPN
WQTLVSRDVLSTLSPQEIKRQEVINELFYTERAHVRMMKVLENLFYQPLIRDSILPPADI
KNIFSNLEEIVQLHMSLTEQMTAVRKKNETALIDSIGDDLLSWFSGEEEAKIKRAAGTYC
SNQPFALELIKSKQKKDQRFNSFIQEAESNRHCRRLQLKDIIPVETQRLTKYPLLLENIA
KYTEDPGERSKVKRAGECCRKILTHVNQEVKEAENKQRLEDYQRRLDLSSMKQSENPMIA
EFKNLDLTKRKMVHEGPLSWKVNKDKTIELYTLLLEDILVLLQRQDEKLILKCHSKNLAG
TAETKHIFSPIIKLSTVMVRSVATDNRSFFVLSMSDNGAQIYELMAQTVSEQKTWQCLIT
QRADSMKTKLLNIIPLPQTDGEREAVELINSGDQKLNKDSEPISLVSIQSPEKDGTEVMP
TQPCSTNPFETKSDEEDEEEENSLQDQADDDEAFVVTDMTDRLTFLKQRSRLGIAIDEDE
AEAFELQPLRADEALRTLATLRQLLINHMSSQEDTDRDIERRVQQEDVVRMGSQPGPEDS
TSIVSAVENGSERGENRGENAQELPSGDTGFFETSEDCVSAGSYMVVEVYGGSGESSTDD
DVQGSSGEPVAGGDSGIDLKKLLSSSSQSSGGPNLNRQIMTHLRILQANLQHLKDTEIKY
NQLRQRLSEETATDTEENKDKS
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgcttattttttttctaaaattttttttctacagtaagactttgatcatctttgcgtgt
cttgcttcaactttgtcttacagttgtggtattccctcagcgtgccagacttgtgaaagg
tttcccaaaaaagcgagcaggacaggaagtattctcagcaaggaccatcccccagacaaa
aagcccaaaagcgacaaggcgtcagtccccccctcgcatgagtttgaccccacagggctt
gtgcagcgttgtgttatcatccagaaagatgagaatggctttgggctgacagtgagcggc
gataaccctgtgtttgtacagcttgtgaaagaggatggagctgccatgcgagctggtgtt
cagacgggtgaccggatcataaaggtcaatgggacattagttacacattcaaaccatgta
gaagttgtaaagctaataaaatcgggctcctacgtggccctaacagtgctggggagaccg
ccgggcctgcctcagatcccgctctcagatggcgagggggaggaggggcctctcttctcc
ttcacctcccctcactccccggggcccatcggtccagaccgctcgtcttcctcccccagc
ccctcggagcgcaaaccgacccctctgcctgtatgggccatgacggaggagcagagcagg
aaccctacacctaaactactgaaggaaatccaggacaccaagaagcacattccacagaac
caggagcagcttagcaagcccactgggactggacaggatggctccttatctccaaggcca
ggagaaggagagcaggaggatggagggggagattcgtatcggcctccttcctggcagggc
gatgctggaatggagccaccgtggaccaacaataccacaacccctgtcactcccagtcct
gtcccagagagcccatgccaaagagagaccccctgccacagcccaaagaccacaccccga
gacagcctcaactcctgtccttcaccggacgccgaagacacacctgaccttgattctcag
tcgagtgtggggagcccttcctctcgtccggtagcacacatcattggtgctgaggacgaa
gactttgacacagagcaggaacagatgaatggccagtgtagctgttttcagagcatagac
ctcctgaaatctcggcctgctcacctggcagctttcatccatcatgtggtctctcagttt
gaccctgcgccgctgctgtgctacctctatgccgaattttacaaacagaccagctccaaa
gagacacgacgattcctcatggataccttcttcatagacaaaacagctagcttgaaagta
acagtacccgaatccatcattgctgacctggaacggactgcacactcaattaatgcagaa
cggaagaggccggagcccatctcagaggacgtccaccgacagtatgtgcagcagctgcag
gacacacttctacctgacatccagaagaacctagaagactttaggcacaagcgcagtatg
ggtctgaccctggctgaagcagagctggcccgtctggatacagagagaatgagagatcgt
gtggctctggaaaaagagcgatcctgtgcagagcacattatctctaagatagaggatgta
ctattgacgtcacaggccacagaggaagataagtgtagcaccatgcagtttgtgatagtg
tcgtatatgaagcagctcggtgtaaaagtgaaggagtctcgagggctcgagcacaagccc
aagctaatgaatctcttccctaagataaagaaaactataaagcttgagaaagatggaagc
gaggagaaatcaaagaaacgatttcctagtgtctttcctcagagacggccgagcaggaat
gacgcttcagcactcagcagggctttggagccgaggcagcgtccgtcaaagcctcagctg
ccattgggcactggagagcaggcagacgggtcgtctcctcccattcggggcagtcaatcc
agcgagggctcagatggcaccactgccctggtcacatcacccccttacagcgctcctgca
gcacagggcacagacggcatcagccgagagtctgaaacaggtggacttccctcttctgca
ctacccagacttggagacggtgtcgtcccaggagattcgcaagaatcgtcctcttcaaac
actcactttgacttcaacgttggaacactggaacatctacaggaggaggaagctgagaca
gacaagacacaggacaccggcactcccaggcctgacaggagcaggatggagccgttgggc
tctggagatgtgcaaagtgaagatgatcagggtgctgaggtggagctagagcctcctaat
tggcagaccctggtgagcagagacgtcctctccacccttagccctcaggaaatcaagaga
caggaagtcatcaacgagttgttctacacagaaagagcacatgttcgaatgatgaaggtt
ctggagaatttgttttaccagccgctgatcagagattccatcctgcctcctgcggacatc
aaaaacatcttcagcaaccttgaggagatcgttcagctgcacatgtctttaacggaacaa
atgaccgccgttcggaagaaaaatgagacagcgcttattgactcaataggagatgatctg
ctttcctggttcagtggggaagaggaggcgaagatcaagagagctgcgggcacgtactgc
agtaaccagccttttgccctggaactcatcaagagcaaacagaagaaagaccagcgcttc
aactccttcatacaggaggcagagagtaaccgccattgtcgcaggctacagttaaaagat
attattcctgtggagacacaaagactcacaaagtatcctctcctgctggagaacattgcc
aaatacacagaggatcctggggagagaagtaaagtgaaacgtgctggcgaatgctgtcga
aagattctcactcacgtcaaccaggaggtgaaggaagctgagaacaaacagaggttggag
gactaccagagacgactggacctgtcatcaatgaaacagagtgagaaccccatgattgct
gagtttaagaacctggacttgactaagaggaagatggtgcatgagggaccactgtcctgg
aaggtcaacaaagataaaactattgagctgtacacattgctgctggaggatatattggtg
ctacttcaaaggcaagatgagaagctaattttaaaatgccacagtaagaatctggcaggc
accgctgagaccaaacacatcttcagcccaatcatcaaactcagcactgtgatggtgcgc
tcggtcgccaccgacaataggtcattctttgtgctctctatgtctgataatggagcccag
atctatgaactaatggcccagactgtatctgagcaaaagacgtggcagtgtctaatcaca
caaagagcagacagcatgaagaccaaactactcaacatcattccattacctcagactgat
ggggagcgtgaagcggtcgagttgataaactctggagatcagaaactaaacaaagactct
gagcccatttctttagtgagcattcagtctccagaaaaagatggcactgaggtcatgcca
acccagccgtgtagcaccaacccatttgagaccaaatctgatgaggaggatgaagaagaa
gaaaactcactacaggatcaagctgatgatgatgaagcctttgtggtgaccgatatgaca
gatcgactgacattcctaaagcagcgctcaaggctgggcatcgccatagatgaagacgag
gccgaggcctttgagctccagccgctcagagctgatgaagctctcagaacactggcaaca
ctgaggcagctcctgatcaaccacatgtccagtcaggaggacacggacagagacatcgag
agacgagtgcaacaggaagatgtggtgaggatgggctctcagccggggccggaggacagc
acttcgatcgtgtctgctgttgagaacggctcagagaggggcgagaacagaggggagaac
gcacaggaactgccctccggagacacaggcttctttgagacgtctgaggattgtgtctct
gcaggcagttacatggtggtggaggtgtacggcggctcaggcgagagcagcacagatgat
gacgtgcagggcagcagtggggagccggtggccgggggagactcaggcattgacttgaag
aagctcctttcttcctcctctcagagcagcggaggaccaaacctcaacaggcagatcatg
acacacttgcgtatactacaggccaacctgcagcatctgaaggatacggaaattaagtat
aaccagctacgccaaaggctatcagaggaaacggctactgacacagaggaaaacaaagat
aaaagttag
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integrated database retrieval system
