Labeo rohita (rohu): 127165162
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Entry
127165162 CDS
T09007
Symbol
arhgef28a
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 28
KO
K21072
A-kinase anchor protein 28
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127165162 (arhgef28a)
Membrane trafficking [BR:
lroh04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
127165162 (arhgef28a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
SOS1_NGEF_PH
C1_1
Ank_2
PH_13
Ank
C1_2
Phage_GP20
DUF2205
Motif
Other DBs
NCBI-GeneID:
127165162
NCBI-ProteinID:
XP_050965447
LinkDB
All DBs
Position
5:25016096..25093100
Genome browser
AA seq
1823 aa
AA seq
DB search
MELSRGEVPLYGQVEVCVKLQLSLCVQEEADYYVVLVGSSLHHVTAAYRTEDQESIRFTV
PGHNVPEKVSVEIYCCLRDSRSHISPLCNSGQLSLEYVRDEAHEVAEQLVNLTSSSYQDI
LRKFCPEKMLSSQSNHLDQTGQHGTDGICDPKELFQLESLAEQNVCEQGNFSQREASGTS
EFNPEHRCTVGQHSAVDXKITQALANLHFLGWDSQVGQEKQDTLFKETPLHLAVRLGFPH
LSHFLLQESEGQWMVPIVDKEGHSPLTLAQKHGDLTLICALTDPSRSSAWRPVWMCQIWT
DGSQQLRICPVTESISLTVKNSTQTDAQHSVELYREKSREPDTLARVGRLSDPSEGSIHT
SDVCSTDLNSQLRIEDETLVDSVFEEQLVLCLDEEDEDLNTFNSEKLCSSPGSCTPFHLH
SSDAAAVRLTAMLRGSAKDNDLNMKYAVSGVTEDSSGTDSGVWQMSDTGVLSPGTVDMPP
AIKDDEGHRGRQHASRSFPPTSPAGLMLDRLMRAARPAELTYNSSNSPTESCDLSPSLVA
LEMDSEEDDDDDILMKKPLPQPQLELKNISDERVMSSPAPDLTCTRSHSASSACNPTPAK
DVEQGIRLRSYSYTSPKISLLPPRFSRDAQPPPTDLNQDGALSSSSGSRSLLQALSLSKS
LSLLNPVKHRPCTTSEPQEKRELRFRRRAQSADDETSAELANSLQHLTLSEFLKEIEEEE
WDKYIIPSKTESEKYKVSRTFSFIKSRMYSTRNKNKGKGKERESKDKQVNGHQFTAGSVL
GSTLCEICCKPASGKEVLHCTYCAVSVHKGCKDSSAPCLKKPQDKNSVMTVKSRTASLPQ
NFIVRENSTSSSQIPTSASLPVMTSRDSTPLPCSLSRSVPAVTERVSGSPEADSDAPPWR
NHIQPEELLQTMESSTSTDSSLIEDSVDSPLQNELLMNAVDLEAESWSLAVEPLFCKMQE
KRIIKRQDVIYEFMQTELHHVQTLTIMAEVFRRGMWEEVGLDADTIGRIFPCLDELLLLH
RDFLSAMKERRQSCVQPNSSKNYLIHRVGDIFLQQFSQENAEKMKQVYGEFCSRHTEAVS
YFKELQQQNKRFQLFIKQQSSNSLVKRREIPECILLVTQRITKYPVLLERILHYTEEGTE
EHADLSRALVQIRELISAVDQRVSQYEQNQKLSEVLGRMENKCSTKLKSGYTFRKQDITS
GRALLHQGPLLWKTATGRLKDVLAFLLSDSLVFLQEKDQKYIFAAVDQKPPVISLQKLIV
REVANEERGMFLISASSAGPEMYEVHAASKDERNAWMRLIREAVESCPEEEDETTSESEE
ERRVTEAKVQKIHRLQESLCGHDHLICANLEEKLHIYAELSVMAGRRETGPEPRLLVRPS
TEDIPQAGVLLSAALKEAENLKAALSSPCASAAVPSCPEEQTESEPCSPSSLQLPENQSL
PMDTIQKEEEEWRGEEGLETQAFNQSSDADDNIRVSQSVQSLTQLLYSLQAAVTIQDSCY
EVQRLLLLLLSSPSPHPHSRPLAITRSSQTLQEQERQREAERRREELADVARLRGALVRE
RQQWERECQIRQLQQSEQEASLEQRELVCHLEERRLQSERQELQEQLQEYQQSLERLREG
QRSVEKEKEKVDAQRRMLESFKQGCQQNLPAMVIPLDGQQTQDTGHHHLGGQDGHGSIFV
NEAAFTSPSLNNRHIHLQHHPHRQHQTVHMHSGSIGYSDSPSAQNSLNSLLARSNHRQSS
GVSDVPAGHESWTGGTMYSSPLRSLTEIPNNDVGQLSQVQESWSAGVTGAGLHQTDVLLV
NQPFVTMETENRDTDGEENIVYL
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
atggagctcagcaggggagaggtgccactttatggtcaggtggaggtctgtgtgaagctg
cagttgtcactgtgcgttcaggaagaagctgactactatgtggtccttgtgggctcatcc
cttcaccatgtaaccgcagcttacaggactgaggatcaagaatcaattagattcactgtg
cctggtcacaatgttccagagaaagtatctgtggagatctactgctgtttgagggacagc
agaagtcacatcagccctctctgcaattcaggacagctctctctggagtacgtacgggat
gaggcacatgaggtggcggagcagctcgtgaacttgacatccagcagctatcaggatatc
ctaaggaaattctgcccagagaaaatgctttcatctcagtctaaccatttagaccagacc
ggccagcatggaacagatgggatttgtgatccaaaggaattatttcaattggaaagccta
gcagaacagaatgtttgtgaacaggggaatttcagccagagagaagcctcaggaacatca
gagtttaatccagagcacagatgcacagtgggacaacacagtgcagttgatnngaaaatc
acacaggccctggctaacttgcactttctgggatgggacagccaagtgggacaggagaag
caagatacccttttcaaggaaacacctctacatttagcagtccgtttggggtttccccac
ctcagtcacttcctcctccaggagtctgaaggtcagtggatggttcccatagtcgacaag
gaaggccatagtcctctcacgctggctcagaaacacggagacttgacgctcatctgcgct
ctaacagatccctcgaggagcagtgcgtggaggccagtgtggatgtgtcagatatggact
gatggctctcagcagctccgtatctgccctgtcaccgaatctattagtctgactgtaaaa
aacagcacacagacagatgcacaacacagtgtcgagctgtacagagagaagagcagagag
ccggatacacttgcaagggtggggcgactgagcgatccgtctgaggggagcatccacaca
tctgatgtatgttccacagatctgaacagccaactgagaattgaggatgaaaccctggtg
gatagtgtctttgaagaacagcttgttctctgtctggatgaagaggatgaagatctaaac
acatttaactcagaaaagctgtgttcctctcctggctcctgcactccatttcaccttcat
tcctcagacgctgctgccgtcaggctcacggccatgctcagaggctccgctaaggacaat
gacctcaatatgaagtacgctgtttcaggtgtcactgaggacagttctgggacagatagc
ggtgtgtggcaaatgtcagatacgggggtcttgtcaccagggactgtagatatgcctcca
gctattaaagatgatgaaggtcatagaggacggcaacatgcttctcgctctttccctccc
acctctccagcgggactgatgctggataggctcatgcgtgccgcacgacctgcagaactg
acatataacagctcaaactcacctacagagtcatgtgacttaagcccgagtctggtggcc
ttggaaatggacagcgaagaggatgatgacgatgacattttaatgaagaagcccctcccc
cagccacagcttgagctcaaaaacatctcagatgaacgggttatgtctagccctgcccct
gatctgacctgcacgcgttctcactccgcctcctctgcctgtaaccccacccctgcaaag
gacgttgagcagggcatccgtctccgttcatattcctacacctccccgaaaatcagcctg
ctgcctccacgatttagtagggatgcccagcctccacccactgacctcaaccaggatggc
gccctctccagcagcagtggcagcaggtctctcctacaggcactgtctctgtctaaatct
ctgtctctgctcaaccctgttaaacatcgtccctgcaccacatcagagcctcaagagaaa
agggagttaaggtttcgtagacgtgctcagtcggctgacgatgagaccagtgcagagctg
gccaactccctccaacacctcacgctctccgaattcctcaaagagattgaggaagaggaa
tgggacaaatatataatcccttccaaaacagagtcagaaaaatacaaagtcagccgcact
ttcagctttataaagagccgaatgtatagcacacgcaacaagaacaaggggaaaggaaaa
gagagagagagcaaagacaagcaggtcaatggacaccagttcacagcaggatctgtcctg
gggtcgacactttgtgaaatctgctgcaagccagcttctgggaaagaggtcctccactgc
acgtactgtgcagtgagtgttcacaagggctgtaaggactcatctgcgccatgcctgaag
aaacctcaagacaaaaattctgttatgacagtaaaaagcaggacagcctccctccctcaa
aattttatagtacgtgaaaattccacatcgtcctctcagatccccacctctgcctctctt
cctgtgatgacatcacgagactcgacccctcttccttgctctctgtctagaagtgtacct
gcagtcacagaaagggttagtgggagcccagaagcagatagtgacgcccccccgtggcgg
aaccacatccaaccagaggagcttctccaaaccatggagtcctcaacatccactgattca
tcacttattgaagactctgtagattcccctctgcagaatgagctgttaatgaatgctgtg
gatttggaggctgagtcatggagcctagcagtggagcccctgttctgtaagatgcaagaa
aaacgtatcatcaagagacaggatgtcatttacgagttcatgcagaccgagctccatcac
gtacagacgctcacgataatggcggaggtcttcaggcggggaatgtgggaagaagtcggg
ctggatgcggacactattggtcggattttcccttgcttagatgagttgctcctccttcac
cgtgacttcctgtcagcaatgaaggaacggcggcaaagctgcgttcagcccaacagcagc
aagaactacctcatccaccgtgtgggtgacatttttctgcaacagttctcccaggagaac
gcagagaagatgaagcaggtgtatggtgagttttgcagccgtcacacagaagcagtcagc
tacttcaaagagcttcagcagcaaaataagagatttcagctcttcatcaaacaacagagc
agcaactcattggtaaagaggcgagaaatcccagaatgcattttattagtgacgcagcgg
attacaaagtatcctgtcctcctggagagaatactgcattatacagaagagggcacagaa
gagcatgctgacctgtctcgtgcactagtccagatccgagagctgatctccgctgtggac
cagcgcgtgagtcagtacgagcagaaccagaagctgagtgaggtcctgggccgcatggag
aacaagtgctcgactaaactgaagagcggttacaccttccgcaagcaggacatcaccagt
ggcagggctttgctgcaccagggcccgctgctctggaagacagccacaggaagactgaaa
gatgttttggcatttttgctgtctgattcattggtgtttcttcaggagaaagatcagaaa
tacatctttgctgctgtggaccagaagcctccagtgatctctctgcagaagctcatcgta
cgtgaggtggccaacgaggagagagggatgtttctgatcagcgcgtcttcagctgggcct
gagatgtatgaggtgcacgctgcttctaaagatgaacgcaatgcctggatgagactcatc
agagaggctgtggagagttgccctgaagaggaggatgaaactacaagtgagtcagaagag
gagaggagagtcacggaagcaaaggtccaaaagatccacaggctacaagagtcgttgtgt
ggccacgatcacctcatctgtgccaatctggaggagaagctgcacatctatgccgaactg
tcagtcatggcaggacgacgtgagaccggaccagagcctagactcctggtacggcccagc
actgaagacatccctcaagctggagtactgctcagtgctgctcttaaagaggcggagaac
ctgaaagcagccctctcctctccctgtgcttctgctgccgtaccgtcttgtccagaagag
cagaccgaatccgagccttgctctccctcctccctccagctccctgagaaccagagccta
ccgatggacaccatccagaaagaggaggaagagtggagaggagaggaaggcttggaaaca
caggcctttaaccaaagctcagacgctgatgacaatatacgtgtgagtcagagtgtgcag
agcttgactcagctgctgtacagtctacaggccgcagttaccatccaagacagttgctat
gaagtccagaggctcctcctcctcctgttatcaagcccctcccctcacccacactcccgc
ccactggccatcactcgcagcagccagaccctgcaggagcaggagcgccagcgggaggcg
gagcgtcggcgagaggagctagcagacgtggcccgtctacgaggcgccctggtacgagag
cggcagcagtgggaacgggagtgccagatacgacagctgcagcagtcggagcaagaggcg
tcactggagcagagggagctggtgtgccacctagaggagcggaggctgcagagcgagcga
caggagctccaagaacagctgcaggagtaccagcaaagcctggagaggctgcgagaaggc
cagaggagtgtggaaaaggagaaggagaaggtggatgcacagcggaggatgctggagagt
ttcaagcagggctgccagcagaacctgcccgcgatggtcatcccactggatggacagcag
acacaggacactggtcaccatcacctgggtggtcaggacgggcatggatccatttttgtg
aacgaggcagcatttacatctccctctctgaacaacaggcacatccaccttcaacatcat
ccacaccgtcagcatcagactgtccacatgcactcaggatctataggatactcagattct
cccagtgctcagaacagtctcaattcactcctggcacgatccaaccacagacagagctct
ggagtatccgatgttcctgcagggcatgagagctggactggaggaacaatgtactcaagc
cctctgagaagtctaacagagatcccaaacaatgatgtgggtcagctcagccaggtccaa
gaatcttggtcagccggagtaacaggggcagggcttcatcaaaccgacgtcctgctcgtc
aaccagccctttgttaccatggagacagagaacagagatactgacggagaggagaatatt
gtgtatctctga
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integrated database retrieval system
