Labeo rohita (rohu): 127165194
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Entry
127165194 CDS
T09007
Symbol
rorb
Name
(RefSeq) nuclear receptor ROR-beta isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127165194 (rorb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lroh03310
]
127165194 (rorb)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
127165194 (rorb)
Nuclear receptors [BR:
lroh03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
127165194 (rorb)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
127165194
NCBI-ProteinID:
XP_050965493
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Position
5:31471116..31497922
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AA seq
470 aa
AA seq
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MKTDVVAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDR
TNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQTGEAE
ALARVYSSSLTNGLSTLNHEIGGTYANGHVIDMPKGQPNGAPGGYYGMDSTQASPDQSGL
DMTGMKQIKQEPIYDLTPVPNLFTYGSYQDSQLAPGVSMGELDRIAQNIIKSHLETCQYT
AEELQQLAWQTHSYEEVKMYQSKTRDVLWQQCAIQITHAIQYVVEFAKRITGFMELCQND
QILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQIFKTLGCDDLVSAVFDFAKSLC
SLQLTEEEIALFSAAVLISTDRPWLMEPRKVQKLQEKIYFALQHIMQKNHLDEDALAKLI
SRIPTLSALCTLHTEELQAFQQLHPETVNMLFPPLYKELFNPDAAGVMPK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaagacagatgttgtagcccaaattgaagtcataccatgcaaaatctgtggagacaag
tcatcaggcatccactatggagtcatcacatgtgaaggctgcaagggtttcttcaggcgc
agtcaacagaacaacgcgtcctactcctgtccccgtcagcgcaactgcctgatcgaccga
acaaaccgcaaccgctgccagcactgtcggctccaaaagtgcctggctctgggcatgtct
cgggatgctgttaagtttggccgcatgtccaagaagcaaagggactctttgtacgcagag
gttcagaaacaccagcagaggctgcaggagcagcggcagcaacagacgggcgaagcggag
gccctcgctcgtgtttactcctccagcctcaccaacggcctcagcaccctcaaccacgag
atcggagggacgtatgccaatggtcacgtcatagacatgcccaaaggtcagccgaacggt
gctcccggaggctactacggcatggactccacacaggccagcccggatcagtcaggattg
gacatgactggaatgaagcagattaaacaggaacccatatatgatctcacccctgttccc
aaccttttcacctacggctcctatcaagacagccagttagcacctggagtgtctatgggg
gaattagaccgaattgcacagaacatcataaagtcccacctggagacgtgtcagtacaca
gcagaggagctccagcagctagcctggcagacgcactcctatgaagaggtcaagatgtac
caaagcaagacacgggacgtgttgtggcaacagtgtgctatacagatcactcatgccatt
cagtatgtggtagagtttgctaagcgcatcactggcttcatggagctttgccagaatgac
cagatattattactgaaatcaggttgtctggaagtagtgttggtcagaatgtgccgggca
ttcaaccctctcaacaacacggttctgtttgaaggaaaatatggaggcatgcagatattt
aaaactctaggctgtgatgacctggtcagtgcagtgtttgactttgccaagagtctgtgt
tcactccagttaacggaagaggagatcgccctgttttctgccgcagtgctcatttctaca
gaccggccgtggttaatggagcccaggaaagtgcagaagctacaagagaaaatctacttt
gccctgcagcacatcatgcaaaagaaccatctggacgaggacgcgctggccaagctgatt
agccggatccccacgctgtcggctctgtgcactctccatacagaggagcttcaggccttc
cagcagctccacccagagacggttaacatgctatttcctcccctctataaggagctcttc
aatcctgacgccgctggcgtcatgcccaaatga
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