Labeo rohita (rohu): 127165223
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Entry
127165223 CDS
T09007
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
127165223 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lroh01002
]
127165223 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127165223 (usp30)
04121 Ubiquitin system [BR:
lroh04121
]
127165223 (usp30)
Enzymes [BR:
lroh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127165223 (usp30)
Peptidases and inhibitors [BR:
lroh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127165223 (usp30)
Membrane trafficking [BR:
lroh04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
127165223 (usp30)
Ubiquitin system [BR:
lroh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127165223 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
127165223
NCBI-ProteinID:
XP_050965556
LinkDB
All DBs
Position
5:35163331..35169038
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AA seq
504 aa
AA seq
DB search
MPWCKQGATDKLVREFLRTGTAARNKMMKNWGVIGGIAAAMAAGVYVLWGPISDRKKKRK
GMVPGLLNLGNTCFMNSLLQGLAACPSFIRWLEDFTNESSNHQERTERETHLSRSLMQLL
KALSSHNPGEDDVLDAGGLLEALRLYRWQISSFEEQDAHELFHVLTSSLEEERERQPRVA
HLFDMQTLEKSVESKEKNISCRTGGPLHPIPSLWRTRHPFHGRLTSYMACKRCEQQSPVH
YDSFDSLSLSIPSVQWGRPVTLDQCLQHFISSETIKEVECENCTKQQAGDLVNGEVLESQ
RTTFVKQLKLGKLPQCLCIHLQRLTWSKEGTPIKRQEHVQFTEYLSLDRYKHCTAGQNPQ
GTSRTNKPTSAKAARDPKDKTIANGVDSEHCNNNKPLSNGTFPSIFLHSPGLSSQLNLTY
DYSTSDYLFRLTAVLVHHGDMHSGHFVTYRRCPAAHRGTSPFSSQWLWVSDDSVRKASLQ
EALSSSAYLLFYERVQRPGLRVEE
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgccttggtgcaaacagggagctacagacaagctcgtccgagagttcttacgcactgga
accgctgcaagaaacaagatgatgaaaaactggggtgtaattggtggaatagctgctgcc
atggctgctggggtctatgtactttgggggccaatttcagacaggaagaaaaagagaaaa
gggatggttcctggtctgcttaatctggggaacacatgctttatgaactcacttctccag
ggcctggcagcatgtccttccttcatcagatggcttgaagactttacaaatgaaagcagt
aaccatcaggagagaactgagagagagactcatctgtccagatctctgatgcagttactt
aaagccctgtcaagtcacaatcctggagaagatgatgttttagatgcaggaggcctttta
gaagctcttagactttacagatggcaaattagctcctttgaggagcaggatgctcatgag
ctctttcatgttctcacatcatcattagaggaggaacgggaacgccaacccagagtcgct
cacctgttcgacatgcaaacactagagaaatctgtggagtccaaagaaaaaaacataagc
tgcagaactggaggcccactacatcctattccaagtttatggaggactcggcaccctttt
catgggcggttaacaagttatatggcttgtaaacgctgtgagcagcagagtcctgtgcac
tatgattctttcgacagcttgtctctttctatcccgtcagtacagtggggtcggccagtt
actttggatcagtgtcttcagcacttcatctcctctgaaaccatcaaagaagtagagtgt
gaaaactgtaccaagcaacaggctggagaccttgtaaatggagaagtccttgagagtcaa
aggacgacattcgtcaagcagctgaaacttggaaagttgccacagtgcctctgcatccat
ttgcagagactgacatggtctaaagagggcactcccattaagagacaagagcatgttcag
tttacagaatatttgtctctggatcgatacaaacattgtactgctggtcaaaacccacag
ggcaccagcagaacaaataagcccacatctgccaaagctgccagagacccaaaagacaaa
accattgctaatggtgtcgattcagaacactgtaacaacaataagccattgtccaatgga
acctttccatccatctttctacactcaccaggattgagctcacaactcaacctcacttat
gactacagcacctcagattacctcttccgcttgacagccgtcctggttcatcatggcgac
atgcattctggacattttgtcacttaccgtcgctgccctgccgctcaccgtggaacatct
ccttttagctcccagtggctctgggtgtctgatgattcagtgaggaaagcaagtcttcag
gaggcactctcctccagcgcatatctgctcttttacgaacgagtgcaaaggcccggtctg
agggtagaagagtag
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