Labeo rohita (rohu): 127165227
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Entry
127165227 CDS
T09007
Symbol
ap1b1
Name
(RefSeq) AP-1 complex subunit beta-1 isoform X1
KO
K12392
AP-1 complex subunit beta-1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
127165227 (ap1b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127165227 (ap1b1)
Membrane trafficking [BR:
lroh04131
]
Endosome - Golgi transport
Others
AP-1 complex
127165227 (ap1b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
Alpha_adaptinC2
HEAT
PDS5
Cnd3
Arm
HEAT_GCN1
HEAT_EZ
HEAT_MROH2B_C
XMAP215_CLASP_TOG
NELF-A_N
VPS15-like_hel
Arm_2
API5
FANCI_S3
Alpha_adaptin_C
Transposase_22
Motif
Other DBs
NCBI-GeneID:
127165227
NCBI-ProteinID:
XP_050965564
LinkDB
All DBs
Position
5:31851428..31887530
Genome browser
AA seq
971 aa
AA seq
DB search
MEWASQLCENRGLGSKMTDSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVG
KDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRA
LAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDT
LKDLISDSNPMVVANAVAALSEIAESHPNSNLLDLNPQTINKLLTALNECTEWGQIFILD
CLANYTPRDDRESQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLPKDLDYYGTLLKKL
APPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIR
LASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVN
YVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNADE
LLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRGY
IYWRLLSTDPVAAKEVVLAEKPLISEETDLIEPTLLEELICHIGTLASVYHKPPSAFVEG
SRGVQHKRLPARAGSGESAESPDVGQSGPAEAPPAVIPSQGDLLGDLLNLDLAPPTATIP
SVQPSMQMGAMDLLGGGLDSLMGDESDTLGGDIGGSPSMGAGLGAAPAAMPAALGSAPAV
GGGLGDLFDLGGGVGMPTGAYVAPKTVWLPAMKAKGLEISGTFARRGGIIQMDLSLTNKA
MSVMTDFAIQFNRNSFGLAPAGPLQVLTPLSPNQTIDVSLPLSTSGPVMKMEPLNNLQVA
VKNNIDVFYFSCQYPLSLLFVEDGKMERQVFLATWKDIPNDNEAQFQIKDIHLNSDAASN
KLQGSNIFTIAKRTVEGQDMLYQSVKLTNAIWVLAEMRIQTGNPNYTLSIKCRAPEVSQF
VYQCYELVLKN
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggagtgggcaagtcagctatgtgagaaccgaggcttgggatccaagatgacagactcc
aaatatttcaccactaccaagaaaggggagatctttgagctgaaggcagagctcaacagt
gataagaaagagaagaaaaaggaggcagtgaagaaggtcattgcgtctatgacagtggga
aaagatgtcagtgctttgtttcctgatgtcgtgaactgcatgcagacggataatctggag
ctgaagaagctggtctatctgtacttgatgaattatgccaagagccagccggacatggcc
attatggcagttaacacctttgtgaaggactgtgaggacccaaaccctctgatccgtgca
ctggctgtgcgcaccatgggctgcatccgagtggacaagatcactgagtacctgtgtgaa
cctctaaggaagtgtctgaaagatgaagacccttatgtaaggaaaactgctgcagtttgt
gtcgccaagctgcatgacattaacgcccagctggtggaggaccagggcttcttggacacc
ctgaaagatctgatctctgactccaaccccatggtggtagcaaatgcagtagcggctctg
tctgagatagcagagtctcatcctaacagcaaccttctggacctgaaccctcagacaatt
aataagctcctgacagcccttaatgaatgcactgagtggggccagatcttcatcctcgac
tgcctggccaactacacgccccgtgatgaccgagagtcacagagtatctgtgagcgtgta
actccacggctgtcccacgctaactctgccgtggttctgtctgccgtgaaggttctgatg
aagttcatggagatgctgcctaaagatctagactattacggcactcttctgaagaaactc
gctcctccgttggtcacgctgctctcagctgaacctgaactgcagtatgttgccctgagg
aacattaacctcatcgtacagaaacgccctgaaattctaaagcatgagatgaaggttttc
tttgtgaaatataatgacccaatctatgtcaagctggagaagctggatatcatgatccgc
ctggcatctcaggccaacattgctcaggtgctggctgagctgaaggaatatgccactgaa
gtggacgtggactttgtgcgtaaagctgtacgagccattggccgctgtgcaattaaagta
gagcaatcagcagagcgttgtgttagcacgctgcttgacctcattcaaaccaaggtcaat
tatgtggtgcaggaagccattgtggtcatcaaggacatcttccgcaagtaccccaacaag
tacgagagtgtgattgccactttgtgtgagaacctggactccctggatgagcctgaggct
cgggcagccatgatctggattgtgggagagtacgcagagaggatcgacaacgcagatgag
ctgctggagagcttcctggaaggcttccatgatgagagcacacaggtgcaactgcagtta
ctgacagctattgtgaagttgttcttgaagaaacccaccgagacccaggagctggtgcaa
caagtgctcagtcttgctacacaggattctgataatcctgacctgcgtgaccgtggctac
atctactggcgtctgctctccacagaccctgtggcggcaaaagaggtggtgctggccgag
aagcctctgatatcagaggagacagacctgattgagcccaccctgctggaggagcttatc
tgccacattggtactctggcctcagtctaccacaaacctcccagtgcttttgtggagggc
agccgtggcgtccagcacaagagacttcctgctcgtgctggctctggggaaagtgctgag
agccctgatgttggccagtctggacctgccgaagctccgcccgctgtcattccatcacaa
ggtgatctcctaggtgacctgctgaacctggatctggccccacccactgccactatccct
tcagtgcagccctcaatgcagatgggagccatggacctcctgggaggaggtctagatagt
ctgatgggcgatgaatcagatacgctgggaggagacatcggaggaagcccttcgatgggt
gccggtttgggggcggccccggcagccatgcctgctgctctcggcagtgctcctgctgtt
ggaggtggattgggagacctttttgaccttggtggaggtgttggcatgccaacaggagcc
tacgttgcacctaaaactgtgtggttaccagcaatgaaggctaaagggctggagatttct
gggacatttgcccgacgtggtgggatcattcagatggatctgtctctcaccaacaaagcc
atgagcgttatgactgatttcgccattcagttcaacaggaacagttttggtctcgcccct
gctggccctctgcaggttctgactcctctgagccccaatcagaccattgacgttagtctc
cctctcagcacgagtggccccgtcatgaaaatggaacctctcaacaatctgcaggtagct
gtgaagaataacattgacgtgttctacttcagctgccaatatcccctcagcctgctcttt
gtagaggacggaaaaatggaacgtcaggtgttcctggccacctggaaagacattccaaat
gacaacgaggcacagttccaaatcaaagacatccacctcaactcagacgcggccagcaac
aagctacaaggcagtaatatcttcaccatagccaagaggacagtggaggggcaggacatg
ctgtaccagtctgtcaaactcaccaacgccatttgggtgctggcagaaatgcgcatacag
accggcaaccccaactacacgctgtcgataaagtgcagagcgccagaggtctctcagttt
gtgtaccagtgctatgagttggtgctgaagaactga
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