Labeo rohita (rohu): 127165251
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Entry
127165251 CDS
T09007
Symbol
sptbn4a
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04517
IgSF CAM signaling
lroh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
127165251 (sptbn4a)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127165251 (sptbn4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lroh04812
]
127165251 (sptbn4a)
Cytoskeleton proteins [BR:
lroh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
127165251 (sptbn4a)
Intermediate filaments
Intermediate filament-binding proteins
127165251 (sptbn4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
CBU_0592
DUF5832
Motif
Other DBs
NCBI-GeneID:
127165251
NCBI-ProteinID:
XP_050965603
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All DBs
Position
5:33438783..33474564
Genome browser
AA seq
1410 aa
AA seq
DB search
MLTARDGARDEAQKLHRKWMKHQAFMAELARNKEWLAKIEQEGEELIQEQPELRSVVEVK
LKEIRECWSHLENTTKVKARQLFETQNHRTTDLPTNTLSDLDQHLNAIQEQPPTLGSSHS
TQPTLLQPRPTFSQQLQRIQSMEAQMQLYQGVGEVRAGADHRRLEGEEQGVVTETRIVRL
IEPLKERRRILLASKEMHQVTQDLEDEIVWIQDRLLLASSTEYGTNLQSVQHLIMNHKAL
QMEIQAQRGRVEDVLERAEAVAALRTPEVELVREGAGHVRQLWEVLQVEMERRTVMLDAV
SHAQQYYTQAAKAESWLSGQKLQVLNEEKGNDEASTLRLLKEQLALEQTVENYAETVSSL
SQQCRRMLELGHPDSEQITKQQAHIDRLYVSLKDLVEQRKTKLEQQYWLYQLKREVEALE
KWITEREAVASSTELGQDLEHVTVLQSSFTQFSTETRAVGQKQMDSVNKMVNEMIDCSHS
DAATIAEWKDGLNESWADLLELIETRAQMLAASYQLHKFFTDCQEVLVQIEGKMRQLPEV
RSCQVSSANPGTLQRLLHSFEHSLQLLVSQVRQLQENAAQLRAIYAGEKADAILSREQEV
MQAWKELLVACEGSRVQVTTVTDKIQFFAVVRELSMWMDGIMGQIGSTDDARDLSVLDGM
MSQHQNLKSKIDNKSKNFVHCVEMGKMLLAARNPAAEEVKEKLEYIMAKQKELNERWEQH
WEKLQQAQQRLQSTQPGSVEQSWLSIKEPITPNTREAGGGTDEVEELIRRHEAFRKAAST
WKDHFSSLRQAEKMKEELNKPPSTSSLLSRQMFPLSCLVPSSSSSSSSSSLFRNPLQDSL
LESKPGPDLMQATEHTMANTLAQRLGSTLNPYTPIMNGSSYHGLNQPSGVVVESVAYHGL
KQQGLSGLDNSSYQGLNQQVGVLGVNSSSYTGLNQQGVLGEDSSSYHSLNHLGAVGVAVE
PKMGYAWQHLKADCFQPKINHIHKAVPPLLEAHRAQLAGGGPNMPAPPMGLDPSLEMIHS
RLQRDPRGSRSDPQMDHLRREREYRLGRQTSSEQEIQARLNELPLIVRQERYRRRMERQS
SSEQEGSGRQRVQKHDSSDAESGKEPSDKRPSGEKRSTMAEIVEQVQEREACHARGEVYR
PPSSLSAPVSRLDRPRARDRPKPRRRPRPKEPEEPRRSRSAPAQSVPFTPQPPTHTVNHE
GFLYRKHEEEGKERSPNSKSWVNLFCVLKQGEIGFYKDARHKTTPYNDEPLLNLAICEFD
TTNGYKKKKNVFILRTTAEGDYIFLAKDEEDLKGWVNSINGSLKEIEEIAKWEKATNSST
DPDKSERKERSEGAEPSEGAERSERSEKSERSDRSDKIEASDKSSEKRDTSEKEKGDRGE
RGERGERRERERGERGDRGSRGSSTSGKSK
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgctgacagctcgcgatggagctcgagatgaagctcagaagctgcacaggaaatggatg
aagcaccaggccttcatggccgagctggcccgcaacaaagaatggcttgccaagatcgaa
caggagggcgaggagctgatccaggaacagcccgagttgcgatcggtggtggaggtgaag
ttgaaggaaatcagagagtgctggtctcacctggagaacaccaccaaagtcaaagcccgc
cagctgtttgaaacccagaaccaccgcactaccgacctgcccaccaacaccctcagcgac
ctggaccagcatctcaacgccatacaggagcagccgcccacacttggctcctcccacagc
acccaacccaccctccttcagccacgccccactttcagccagcagctccagaggatacaa
tcaatggaagcccagatgcagctttatcagggtgttggtgaagtcagggctggtgctgat
caccggagactagaaggagaggaacaaggagtcgtgacggagacccgaatcgtgcgtctt
attgagcctctgaaggaaaggaggcggatccttctcgcctcaaaagaaatgcaccaagtc
acccaggacctagaggatgagattgtgtggattcaggatcggttacttttggcctcatct
acagaatatgggaccaatctgcagagtgtccaacatttaatcatgaaccataaggcactg
cagatggagatacaggctcagagggggcgggtcgaagatgtgctggaaagggcagaggcc
gttgctgccctgcggaccccagaggtggagcttgtgcgggagggggcggggcatgtgaga
cagctgtgggaggtgcttcaggtagagatggaacgtcgcacagtgatgctggatgccgta
agccacgcccagcagtactacacccaggcagcgaaggcggagtcttggctcagtggacag
aaacttcaggtcctcaatgaggagaaaggaaatgacgaggccagcactcttaggttacta
aaagagcagttggccttagagcaaacagtggagaattatgcagagacagtaagctcactg
tcccagcagtgccgccgcatgcttgagttgggacatccagacagtgagcaaatcaccaaa
cagcaggctcatatagaccgactatatgtatctctaaaagacctggtggaacagaggaaa
acaaagctggagcagcaatactggttgtatcagttgaagcgagaggtggaggcactggag
aaatggatcactgagagggaggctgtcgccagctccactgaactcggccaggacctagag
catgtcacggttctgcaaagcagctttactcagttctccactgagacacgtgcagttggc
cagaaacagatggattcagtcaataagatggtgaatgagatgattgactgcagtcactct
gatgctgccaccattgcagaatggaaagatgggctgaatgagtcctgggcggatcttctg
gagctcattgagaccagagcacagatgcttgcagcctcgtaccagctacacaagttcttc
actgactgtcaggaggtgctggtccagatcgagggaaagatgagacaactgccagaggtg
aggtcatgtcaggtgagctcggccaaccctggtacactgcagagactcctgcactctttt
gaacactccctgcagctgctggtctcacaggtgcgccaactgcaagaaaacgcagctcag
ctgcgtgcaatttatgctggagagaaggcagatgccattttgtcccgtgagcaggaagtg
atgcaggcctggaaagagctccttgttgcatgtgagggcagccgtgtgcaggtcaccaca
gtaaccgataagatccagttctttgctgtggtgcgggaactgagcatgtggatggatgga
atcatgggacagattggctcgactgacgatgctagggacctctctgtgctagacggcatg
atgtcccaacatcagaatctgaagagtaagatagataacaagagcaagaactttgtgcat
tgtgtggagatgggaaagatgctgctcgctgcacgcaaccccgcagctgaagaggtaaag
gaaaagctggagtatatcatggcaaagcagaaagaactgaatgagcgatgggagcagcac
tgggagaagcttcagcaagcccagcagaggctgcagtctacccagccgggatcggtggag
caatcctggctctcaatcaaggaaccaatcactccaaatacccgagaggcaggaggcggg
actgacgaggtggaggagctgattcgccgccatgaagcgttccggaaggccgcgtccacg
tggaaagatcatttcagctcgttacgacaggcagagaagatgaaggaggaactgaacaag
ccaccttctacctcctctctcctcagcaggcagatgttccctctctcctgtctcgtgccc
agctcttcttcttcatcttcgtcctcctctctcttccgtaaccctcttcaggactcactt
ctggagtccaagcccgggccggacctcatgcaagccacagaacacacaatggcgaacaca
ctcgctcaacggctcgggtccaccctgaacccctacacgcccatcatgaatggctcctcc
taccacgggctaaaccagccatcaggggtcgtggtggagagtgttgcataccatgggcta
aaacaacagggtctttcagggttggataattccagctatcaggggttaaaccaacaagtt
ggtgtcttgggggtaaacagctccagctacactggactaaaccaacagggtgttttagga
gaagacagctccagctaccacagcctgaaccatttaggtgctgtgggggtagcggtagag
cccaaaatgggatatgcttggcagcacctgaaagcggactgctttcagcctaaaatcaac
cacattcacaaagctgttccacctttactggaggcgcaccgagcgcagctcgccggtgga
ggaccaaacatgccagctcctccgatgggcctggacccctccctagagatgatccacagt
cgtttacagagagacccccgtgggagccgatctgacccgcagatggatcacttgcggcgg
gagagagagtaccggcttggccgtcagacctccagcgagcaggagatccaggcacgactt
aacgagctcccgctgatcgttaggcaggaacgctaccgtcgaagaatggagagacagtcg
tccagtgagcaggagggcagcggtaggcagagagtacagaaacatgactccagtgatgca
gaatctgggaaagagccatctgacaagagaccatccggggagaagcgttccactatggct
gagattgttgagcaagtgcaggagagagaagcttgccatgcgaggggagaggtgtacaga
ccacccagcagcctctctgcaccagtgagccgcctggatcgccctcgagctcgagaccgc
cccaaaccacgacgaagacctcgtccaaaagagcccgaggagccacggaggtcccgttct
gcacctgctcagagcgtcccattcacacctcagcctcctacccacaccgtcaatcatgaa
ggattcctgtacaggaaacacgaagaggaggggaaagagagaagcccaaacagcaagtcg
tgggtaaatttgttctgcgtgctcaaacaaggggagattggtttctataaggatgcacga
cacaaaaccacaccctacaacgatgagccacttctcaacttggccatctgtgaatttgac
actaccaacggatataaaaagaagaagaatgtcttcattctcaggaccactgctgaaggg
gactacatcttcctggctaaggatgaggaggatctgaaaggttgggtcaacagcatcaac
ggcagcctgaaggagatcgaggaaattgccaagtgggagaaagccacaaactcctccacc
gaccccgacaaatcagagcgcaaggagcgttctgaaggggcggagccatccgagggggca
gagagatcagagaggtcagagaagtctgagcgttcagaccgatcagataaaatagaggca
tcggacaaaagctcagaaaagagggacacatccgagaaggagaaaggagatagaggtgaa
agaggagagaggggagaacgaagggagagagagaggggtgaacgaggagaccggggctcc
aggggttccagcacttcgggaaaaagcaaatga
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