KEGG   Labeo rohita (rohu): 127165255
Entry
127165255         CDS       T09007                                 
Symbol
tet3
Name
(RefSeq) methylcytosine dioxygenase TET3 isoform X1
  KO
K24309  methylcytosine dioxygenase TET2/3 [EC:1.14.11.80]
Organism
lroh  Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lroh03000]
    127165255 (tet3)
   03036 Chromosome and associated proteins [BR:lroh03036]
    127165255 (tet3)
Enzymes [BR:lroh01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.80  methylcytosine dioxygenase
     127165255 (tet3)
Transcription factors [BR:lroh03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    127165255 (tet3)
Chromosome and associated proteins [BR:lroh03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    127165255 (tet3)
SSDB
Motif
Pfam: Tet_JBP zf-CXXC
Other DBs
NCBI-GeneID: 127165255
NCBI-ProteinID: XP_050965617
LinkDB
Position
5:38766532..38813265
AA seq 2072 aa
MHKLRGGPGPPVQDIYEFSLDEEDPKVFLGARSARVVSPAADYIRSEHEQAGMFSLPQVE
AGQEPIEPMVPLKKKRKRCGVCGPCMRKENCGTCSNCLNRKIGHQICKLRKCDELKRRKS
PWEVEYFEDVKSRSIIPNLAKETVSVVGSVDGPRGRGQMEIGSHDRLDEGVLNQELSNGL
SKHIANEENICDEEVRGVAREQHQHNYHEGAGCISQTPGWIPEHAGKSNPESQQGAWRGQ
NASTPVNDVDMEDARTLVAFSATVGSLPPYTNHQPSQTPTAQLYERFNQEMSNGGEEARQ
KGVDGEMYPPEDLNTLQAALSKARHGHKPPNCDCDGPDCPDYLEWLEKQIKMVANCQDKG
SCKISGASPQPHAQHRHAQSQPQQCGGNPSCVQDPNPHPHVNQPSAPRPFGPPAPIPCSP
SVLSIAKERNVSLQTAIAIEALTQLSATDPQTVVPPGESSPANHHQHLPTSYPQSIPQVV
SSSPGPLLTSSASSAMPQSIPPGHYPQQELSWNQQRPQSQGEAPAPNILSSPSHYASTYP
SSKSPFASVHPSTPNPRPLQWNQGTAESCEKSSPRNPWMMVNTDSQPRFVSSSQGSSDPV
SELKQLLGDTGGKYTNSAFKFPLPHPSLQDCRKGSLPGMPHIKQEVDTKEYLGSGCAVMG
QEGMVNGQQQFQGQQFSPTIRHSTQAALQQHLHHKRNLFSNPPAFNPLAPMACQNLRKWW
PQPIPEGPVTIKQEHKEPKKKKGAQSSPLLKQPVGGLFGPLGTPLPKPKQIVIKKHKQKA
SQPSFLPQNQIIISKPPLFPPGCAPSLSQLAPSLPGMEAGLPPSQVAESHPAPAQSQESI
LNGSSSAPISENTLSSFTPVSVLAPSTQKVIASPTPDGPNDNIPTTSITPQTSTTQQTPS
LAGLSNLDPKFEELIRQFEEEFGDTISSASAAETPENGPAQPVVTESQPNSGQTRPESPS
QKQPNNCPPFPTNDSEPMDEGQKDMAERLNEKTPLPSEELCSIKQESEECEVDMKPSGQP
LPVAQDAFLERQHPFITPFSPPAKRVKIESSGGVTVLSTTACLSADRERDDLNTPTKDIF
PSSPSLKGFLESPLRYLDTPTKNLLDTPRKDAQPDFPTCDCVDQVLEKDEGPYYNHLGSG
RDIASVRQTMEERYGEKGEAIRIERVIYTGKEGKSSQGCPIAKWVIRRSSEKEKLLCIVK
QRPGHHCANTVIVVVIICWEGVPRALGDKLYKEITETLIKHGNPTSRRCGLNDDRTCACQ
GKDPDTCGASFSFGCSWSMYFNGCKYARSKTPRKFRLHGDHPEEEDNLRDNFQNLATHVA
PVYKRLAPQAYSNQCLNEKIASDCRLGLKEGRPFSGVTACMDFCAHAHKDQHNLHNGCTV
VCTLTKEDNRRVGTIPEDEQLHVLPLYKISPTDEFGSEENQRLKMQTGAIQVLTSFRRQV
RKLPEPAKSCRQRRLEAKKAASEKKNRKLQLAETPEKTVKMEMHHMESPHPEQGNKAIPK
QEVKPTLKKEPVDRFQPFNGAIHGYPALGNGKTTSDPHNMHSSLSYPGNYARGRIPTNSQ
PPAQSPINGFHPSLQEIRYGYYNYPPSALFPPELLGYDNAAWPKAGEPSATPFDQKPDVQ
CLQAKLAQAYPGRPLQPQQQMADASIQGFPHPSEVSQSPVPPSRTPSHEQTHRSTPIIKQ
EPMDVPLYDGRSDGQAQSCPSTPSTTPKPEGWPGHKLNGSLVPKGWDGSIRPGPTDSPFT
PDKQRLHQQHPHQHEHPQYLQQQQWNSYSCPNTPMASPAPSPSPSLKAGLSPAPSPHPST
PRQWGSPAPSPQPKAWGPYGPIGYGAGGILQGNPAGAFPDKMLSQAGGNCGSAPLGLQEK
AWKSGGGSAAGSTPSPAPEGRLFPDALQKSDGQACWDSEAETQSERDPEEDDVWSDSEHN
FLDPNIGGVAVAPAHGSILIECARRELHATTPLKKPDRSHPSRISLVFYQHKNLNQPSHG
LALWESKMKLLAERARQRQQEAALLGLSQEEIKAYGKKRKWAAGSASPSPGQTKDRREGV
VTRMAPTQHTTTIVTVSPYPSTHLTGPYSRFV
NT seq 6219 nt   +upstreamnt  +downstreamnt
atgcacaagctgagaggaggccctggccctcctgtccaggacatatatgaattctctctg
gacgaggaggaccctaaagttttcctaggggccaggagtgcaagggtggtgtctcccgcg
gccgactacatcaggtccgagcatgagcaagctggcatgttctccttgccacaggtggag
gcgggccaggaaccaatagagcctatggtaccacttaaaaagaagaggaagagatgtggc
gtatgtgggccttgtatgaggaaggagaactgtggtacctgcagcaactgcctgaaccga
aaaattggacaccagatctgcaaactgagaaaatgtgacgagctgaagaggaggaagagc
ccatgggaggtggaatattttgaagacgtaaaatcccggtccataatcccaaacctggct
aaagagactgtttctgtggtgggttcagtggatggccccagaggaagaggccagatggaa
attgggtcccatgaccgcctggatgaaggcgtgttaaaccaggaactgtctaatgggctt
agcaaacatatagcaaatgaagaaaatatttgtgatgaagaagtcagaggcgtggccagg
gagcaacaccagcacaactaccatgagggagctggatgtatttcccagacaccgggttgg
atccctgagcatgctgggaagtcaaatcctgaatctcaacagggtgcgtggagaggccaa
aatgccagtacaccagtgaatgatgtggatatggaggatgcgcgaaccctggtggccttt
tctgctactgttggctcactgccaccttacaccaaccatcaaccttctcagactcccaca
gctcagctgtacgaaaggttcaatcaggaaatgtctaatggaggtgaggaggccagacaa
aaaggtgtggatggtgagatgtacccccctgaagatctaaacactcttcaggcagcactg
agcaaggcccggcatggccacaagccacctaactgtgattgtgatggcccagactgccct
gactacctggagtggctggagaagcaaatcaaaatggtggctaactgccaggataaaggt
tcctgtaagatttcaggtgcttctccacagccacatgcacagcatcgtcatgcccaatcc
caacctcagcaatgtggaggtaacccctcgtgtgtgcaagacccaaatccacatccccat
gttaaccagccttctgctcctagaccctttggcccaccagcacccatcccctgctcccct
agtgtcctgtcaatagccaaggaaagaaatgttagcttgcaaacagcaattgcaattgag
gctctgacccagttgtctgccactgacccacaaactgttgttcctccaggcgagtcttca
cctgcaaatcaccatcagcatctgccaacctcctacccgcagagtattccacaagtggtc
tcttcatcacctggtcctcttttgacctcctctgcctcctctgctatgccacagtccatc
cctccaggacattatcctcaacaggagctatcatggaatcagcagagacctcagtctcag
ggtgaggcccctgcacccaacattttgtctagcccatctcactatgcttccacataccca
tcctccaagtccccgtttgcaagcgtacacccatcgacccctaatccccgacccctgcag
tggaaccagggcacagctgaaagctgcgagaaaagctcccctcggaacccgtggatgatg
gtgaacaccgattcccagcctcgttttgtaagctcatcccaaggcagtagtgacccagtg
tccgagctaaagcaactgctcggagacactggtggaaagtacaccaactcagccttcaag
ttcccactccctcaccccagcttgcaggattgtcgcaagggaagcctccctgggatgcct
cacatcaagcaggaggtggacacgaaggagtacctgggctcagggtgtgcagtcatgggc
caggaggggatggtaaatggccagcagcagttccagggtcagcagttttcccccaccatt
aggcactcaactcaggcagcactacagcagcaccttcaccataaacgtaacctcttctct
aatccccccgccttcaatcctttagcccccatggcttgtcagaaccttcgtaagtggtgg
ccacagcctattccagagggtcctgtaaccatcaaacaggagcacaaagaacccaaaaag
aaaaagggcgctcagagttctccacttctcaagcagccagtgggtgggctttttggtcca
ctgggcacacctcttccaaaacccaaacagattgttatcaagaagcataaacagaaagct
tcccaaccatctttcctcccacagaaccagattataatatcaaaacctcccctcttcccc
ccaggatgtgcaccatccctatctcagcttgctccatctctaccaggcatggaagctggg
cttcccccctctcaggtggctgagagccacccagctccagctcaatctcaggaatccatt
ttgaatggcagtagtagtgcacctatctctgaaaacactctttcttcttttacccctgtg
tctgtcctagcaccatccacccagaaggtgatagctagcccaaccccagatgggccaaac
gataacatcccaacaaccagtatcacacctcaaacctctacaacacagcagactccttct
ctggctggcctcagtaacctagatccaaaatttgaagagctgattcgccagttcgaggag
gagttcggggacaccatttcctcagcttctgcagcagagaccccagagaatggccctgct
cagccagtggtgaccgagtcgcaaccaaactcaggacaaaccagacccgagtcaccatcc
caaaagcagccaaataactgccctccttttcccacaaatgattctgagcccatggatgaa
ggtcaaaaggacatggctgaaagactgaacgaaaaaacaccattgccatctgaggagctc
tgtagtatcaaacaggaaagtgaggaatgtgaggtggacatgaaaccttctgggcagccc
ctgcctgtagcccaggatgcatttctggagcgtcagcaccccttcatcacacctttctcc
cctccagctaaacgtgtaaagattgagtcatctggcggcgtgacagtgctctccacaact
gcatgtttgtctgcagacagagagagggacgatttgaatactcccaccaaggatatcttt
ccctcctccccttcacttaaaggatttcttgagtcaccattgcgttatctggacactccc
accaagaacctgctggatacacccaggaaagatgcccaacctgactttcccacctgtgac
tgcgtagatcaagtcctagaaaaggatgagggtccatattacaatcatttgggatctggg
cgagacattgcttcagtcagacaaacgatggaagagaggtatggggagaagggcgaagcc
attcgtattgagagggtgatttacacagggaaagaaggaaagagctctcagggatgtcct
atcgctaagtgggtgattcgtcgcagcagtgagaaggagaaattgttatgcattgtgaag
caacggcctgggcaccactgtgccaatactgttattgttgttgtcatcatctgctgggaa
ggtgtaccccgtgctctaggagataaactctacaaagaaatcacagaaaccctcatcaaa
cacggcaatcccaccagccgccgctgtggactcaatgacgatcgaacctgtgcatgccaa
gggaaggacccagatacctgtggagcttccttctcttttggctgctcctggagcatgtac
ttcaatggatgcaagtatgctcgaagcaaaacccctcgcaagttcagactgcatggagac
caccccgaagaggaggacaatctcagggataacttccaaaacttggccacacatgtggcc
cctgtgtataagaggctggctccccaggcctacagtaaccagtgtttaaatgagaagatt
gcttcagactgtcgattgggtttgaaggaaggacggccattttcaggagtcactgcatgc
atggatttctgtgcccatgctcacaaagaccagcataatcttcacaatggctgcactgtg
gtgtgcactctcacgaaagaggacaatcgcagggtgggcacaatcccagaagatgagcag
ctgcatgtgcttccgctctacaagatttctccaaccgatgaatttggaagtgaggagaac
cagcgtctcaaaatgcagacaggagccatccaggtgctcactagcttccgtcgacaggtt
cgaaaacttccagaacctgctaaatcctgccggcagcgtcggttggaggccaaaaaggct
gcatctgagaagaagaacaggaaattgcagcttgcagaaaccccagagaagactgtcaag
atggagatgcaccacatggagtcaccccaccctgagcaaggcaataaagctattccaaaa
caggaggtgaaaccaaccctcaaaaaagagcccgtcgaccgcttccagcccttcaatgga
gccatacatggctacccagcactagggaacggcaagacaacctctgatccccacaacatg
cacagttcgttgtcatatcctggtaactatgcaagaggtcgcatccctaccaacagccag
cctcctgcacagagccctatcaatggctttcaccccagcctccaagaaatacgctacggt
tattacaactaccctcctagtgcactttttcctcctgagctcttgggatacgataatgca
gcctggcccaaagctggagaaccctctgccacaccatttgaccagaagccagatgttcag
tgtctccaagccaaactggcacaggcctatcccggccgtcctctgcagccacagcaacaa
atggctgatgcctccattcaaggcttcccacacccttctgaggtttcccagtctcctgtc
ccacccagccgtactccatcgcatgagcagacacaccgctctacgcccatcatcaagcag
gagcccatggatgtgcccctatatgacggcagatcggatgggcaagctcaaagctgccct
agcactcccagtaccacaccaaaacccgaaggctggcctgggcacaaactgaacggcagc
ctagtccctaaaggctgggatggaagtatcaggccaggtccgactgattcgcctttcact
ccggacaagcagaggctccaccagcaacacccacaccaacacgaacaccctcagtatcta
cagcagcaacaatggaattcctattcctgccctaacactccaatggcatcccctgcccca
tctccgtccccatccctaaaagcaggtctgtcacctgcaccctctccgcacccgtccacc
ccaagacagtggggtagccctgccccaagtccacaacctaaagcatggggtccttatgga
cccataggttacggcgccggtggtatactgcaaggaaatcctgctggtgctttccccgac
aaaatgctttcccaggcaggtgggaactgtggctctgcacctctgggactccaggagaaa
gcctggaaatctggtggtgggtcagcagcaggcagcacgccatctccggctcctgaggga
cgcttgtttcccgatgcactgcaaaagtcggatggtcaggcatgttgggacagtgaggca
gagacccagagcgaacgtgaccctgaggaggacgatgtgtggtcagacagcgaacacaac
ttcttggatcccaacattggaggagtagcagtggcccccgctcatggttctatcttaatt
gagtgtgcccgtcgagagctccacgccaccacgccgcttaaaaagcctgaccgctctcac
ccgagccgcatatccctggtcttctaccagcacaagaacctgaaccagccctcccatggt
ctggctttgtgggagtccaagatgaaactcctggccgagcgagcacggcagcggcaacag
gaagcagctcttttgggtctctcacaggaagaaattaaggcctatgggaaaaaacgcaag
tgggcggctggatcggcgagcccgtcccctggacaaaccaaggacagacgagagggtgtg
gtgacacggatggcgcccacacagcataccaccaccatagtcacagtttcaccctaccca
tccacacacctcactggtccttacagtcgatttgtgtga

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