Labeo rohita (rohu): 127165266
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Entry
127165266 CDS
T09007
Symbol
spaw
Name
(RefSeq) southpaw
KO
K04666
nodal
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04060
Cytokine-cytokine receptor interaction
lroh04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
127165266 (spaw)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
127165266 (spaw)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lroh04052
]
127165266 (spaw)
Cytokines and neuropeptides [BR:
lroh04052
]
Cytokines
Transforming growth factors (RSTK binding)
127165266 (spaw)
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Defensin_3
Motif
Other DBs
NCBI-GeneID:
127165266
NCBI-ProteinID:
XP_050965637
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Position
5:complement(2824225..2833909)
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AA seq
405 aa
AA seq
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METQPIMLFAVLVVSLMQAGCVKIDNRGALMGEHHKAFAGSYSDLSLQSYARYPLYMMQL
YRDFSGKMATTPASDDSPTLHQSDFVLSLIAQDCHQIGERWTVTFDMSSLSASDSVQLSE
LRIRLPAFSASSRVIVDIFHLRKQDCESDSVFCRHKRLFIGSIKSVPSTPRSTWRVFNVT
ELLEHWLSQGTETPEQVQDGEDTGSGEDLPELVANSWRRKIQHPTAERVMIVVFYKNNFS
HSGQQRASSLISTVAHSKYVVLQQAPNAAQGRRHKRNRVERMRATDDRNATGIVAPPEQQ
QGSLCRRVDMWVDFDQIGWDEWIVHPKRYNAYRCEGECPSPLDESFNPTNHAYMQSLLKL
YHPERVTCPSCVPTRLSPLSMLYYEGDGVVMRHHEDMVVEECGCQ
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcagccaatcatgttgttcgctgtcttggtggtttccttgatgcaagctgga
tgcgtaaagatcgataatcgcggtgctctcatgggagaacatcataaagccttcgcaggt
tcatattccgatctcagtctccagtcttatgccaggtacccgctctacatgatgcagtta
tacagagacttcagcggtaagatggcaactactccagccagtgacgacagcccaactctt
catcagtctgacttcgtcctaagcctgattgcacaagactgtcatcaaattggtgagcga
tggaccgtcacttttgacatgtcttccctctcagcgagtgacagcgttcagctgtcggag
ctccgcatccgtctgccagcgttttcagcatccagccgcgttattgtggacatcttccac
ttgcgtaaacaggattgtgagtctgactcagtgttctgtcgtcataagcgactttttata
ggcagcatcaagtcagtgcccagcactccaagatcaacatggagagttttcaacgtcacg
gagctactcgagcactggttgagtcagggaacggagacacctgagcaggtgcaggacgga
gaggacaccggaagcggggaagacttacctgaactggttgcaaatagctggcgccggaaa
atccagcatcctactgcagaacgagttatgattgtagttttctacaaaaacaacttttcc
cacagcggccagcagcgtgcctccagcttgatcagtacagtggcgcactctaaatatgtt
gttctacagcaggcaccaaacgcagctcaaggtcgccgccacaaaagaaaccgggtcgaa
aggatgcgcgcaacagatgatagaaacgcgacgggaatagtagcacctccagagcaacaa
caaggatcactttgtcggcgagtcgatatgtgggtggattttgatcagattggatgggat
gaatggatcgtgcatccaaagcgttataatgcataccgctgcgaaggcgaatgtccaagt
ccgttggacgagtctttcaacccaacaaaccacgcctatatgcagagtttgttgaagctt
taccatccggaacgcgtcacctgtccgtcatgtgtgccgacgcgcctcagcccgctctcc
atgctgtactatgaaggcgacggtgtggtcatgcgccaccacgaggacatggtcgtggag
gagtgcggttgtcagtga
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