KEGG   Labeo rohita (rohu): 127165294
Entry
127165294         CDS       T09007                                 
Symbol
ercc5
Name
(RefSeq) DNA excision repair protein ERCC-5 homolog
  KO
K10846  DNA excision repair protein ERCC-5
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    127165294 (ercc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lroh03400]
    127165294 (ercc5)
DNA repair and recombination proteins [BR:lroh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     127165294 (ercc5)
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc
Other DBs
NCBI-GeneID: 127165294
NCBI-ProteinID: XP_050965689
LinkDB
Position
1:49809049..49824598
AA seq 1038 aa
MGVHGLWKLLESTGKPINPETLEGKILAVDISIWLNQAVKGVRDRDGNAVQNAHLLTLFH
RLCKLLFFRIRPVFVYDGDAPLLKKQTLAIRRQRREEMSRESKQTNEKLLQTFLKRQAIK
AALGDKSQEAIPSLSSVRRDEQDDMYVLPALPPDEDRDESSSEEERDGDESLQTYGRFQE
EVYDNPNSVDINSEEFSLMPPEIKHEIHKEMKEFSKRRRTLFHKPPERSGEFSQYQLAGL
LQRNKLNLRLEGVEQEMNQRSSGGADQPYDQSKDHDMEIRRLVSEDSSHYILIKGSQKKA
SAPDSGPAPALWSSCPWERKGRPKGKPEPLWRPVTEDDENKPSSSSSCPEEEPPALEGAP
PSPRSLQAIQSAMMDSSSEEEGSENGRVSPRTLQAIQSAMTDPADAHKRRTYVITSSSED
EEEAVVPDRSDMTEVTTGGGVSPRTLMAIQKALGDEAVEQTDLRSGSDGEVPGISVSSQE
SSESKHQSRTPLILSSAVSGSQEETREPRDAAVNHLVEQRHPSASSDRKPVHADRTDQTE
ENKVRSEDEEESSSEESFIEVSDAEETSEREESRIEAEESADQSTSEEKEEEQPEEEESR
EEESSVQSPDKSEEVNESLNEAAAAAAASEWDHIDAEELLQLDRDLQDEQTSLREQQQQQ
QRSSSTVTGQMCQESQELLRLFGVPFIVAPMEAEAQCAALDRLDQTHGTITDDSDIWLFG
GRHVYKNFFNQNKYVEHYQSVDMQNQLGLDRSKLINLAYLLGSDYTEGIPGVGYVTGMEI
LNEFPGGGLEPLVQLSEWWTEAQENKKLAANPKDTKVKKKLRNLQLHPGFPNPAVAQAYL
QPTVDQSDASFSWGRPHLELIKEFCQSRFGWSSRKTEETLQPMLKQLQMQQTQLRIDSFF
RLEQQERQSIRSQRLRRAVTCLKRKEREEEVEEEEETSPSKKDRSGASQPDGAPGAVGPL
AGGFVESVPLLNSPADTQDETRGGATPMMSSRAESSSSSSEDDNECGRGVAMVTARSVFE
GKTRGRGKRGGRGRSRNR
NT seq 3117 nt   +upstreamnt  +downstreamnt
atgggagttcacggactgtggaagctgttggaaagcaccggaaaacccatcaatcccgaa
acactggaggggaagatcttagctgtcgacatcagtatctggctgaatcaggcggtgaaa
ggcgtgcgggatcgcgatgggaacgcggttcagaacgctcatctcctcacgctcttccat
cgcctctgtaagctgctgttcttccgcatcagacccgtgttcgtgtacgatggagacgcg
ccgctgctcaagaaacagacgctggccatcaggaggcagcggagggaggagatgagccgc
gagtccaaacagaccaatgagaagctcctccagacgttcctcaagagacaggccatcaaa
gcagctttaggagacaaaagtcaagaggcgattcccagcctgtcgtcggtgagacgagat
gagcaggacgacatgtacgttctgcctgcgcttcctcctgacgaggacagagacgagagc
agttcagaggaggaaagagacggagacgaatcactgcagacctacggcagattccaggaa
gaggtctatgacaacccgaactctgtagacatcaactctgaggagttttccctgatgcca
cctgagatcaaacacgaaatccataaagaaatgaaggagttcagcaagaggcgacgcacc
ctgttccacaaacccccagagaggtcaggcgagttctctcagtatcagctggcgggtctc
ctgcagaggaacaaactcaacctgcgtctggagggagtggagcaggagatgaaccagcgc
agctctggaggagccgatcagccgtacgaccagagcaaagaccacgacatggagattcgc
cgcctggtgtccgaagactcctcgcactacatcctcattaaagggtcccagaagaaagcc
agcgctccagacagcggtccggctccagcgctgtggtccagctgtccgtgggaacgtaaa
gggaggccgaaagggaagcctgagcccttgtggcggcccgtgacagaggacgatgagaac
aagccttcctcctcctcgtcctgtcctgaggaagagccgccggcgttagaaggagcgccg
ccctctcctcgctccttacaggccatccagagcgccatgatggacagcagctctgaggag
gaaggatctgaaaatggacgtgtctcacctcgaactctacaggccatccagagcgccatg
acggatcccgcagacgcccacaaacgcaggacgtacgtcatcaccagcagctcagaggac
gaggaggaagcagtggttcctgacagaagcgatatgactgaggtcaccacaggtggaggt
gtttctcccaggactctgatggccatacagaaagctctgggagatgaagccgtggagcag
acggacctgaggagcggctctgatggagaggttcctggaatcagcgtttcctcacaggag
tcttcagaatccaagcatcagtccagaacgcctcttattctcagttctgctgtatctgga
agccaggaggagacacgtgagcctcgagacgctgcggtgaatcatcttgtagagcagaga
cacccgagcgcttcctctgatcgcaaacctgtgcatgcagaccgaacggatcagacggaa
gaaaacaaagtgaggagtgaagatgaggaggaaagcagctctgaagagagttttatcgag
gtctctgatgcagaggaaacatctgaaagagaggaatctcgcatcgaagcagaagaatcg
gccgatcaaagcacctcagaagagaaagaggaggagcaaccagaggaagaggagagcaga
gaggaagagtccagcgtccagagcccagataagagtgaagaagtcaacgagtccctaaat
gaagctgctgctgctgctgctgcgagcgagtgggatcacatcgacgcggaggagctgctg
cagctggacagagacctgcaggacgagcagacgagtctgagagagcaacagcagcagcag
cagcgcagcagctccaccgtcaccggacagatgtgccaggagagccaggagctgctgcgt
ttgttcggtgtgccgttcatcgtggcgccgatggaggccgaagcccagtgtgcggcgctg
gaccgtctggaccaaacgcacggcaccatcaccgacgacagcgacatctggctcttcggc
ggccgacacgtctacaagaacttcttcaaccagaacaaatacgtggagcattaccagtct
gtggacatgcagaaccagctgggcctggacaggagcaaactcatcaatctggcgtatctg
ctgggcagcgattacaccgagggcattccaggagtgggatacgtcaccgggatggagatc
ctcaacgagtttcctggaggcggtttggagccgctcgttcagctcagtgagtggtggacc
gaagcgcaggagaataagaaactggccgccaaccccaaagacacaaaggtcaagaagaaa
ctgaggaatctccagcttcatcctggtttcccgaacccggccgtggctcaggcttacctg
cagcccaccgtcgaccagtcggacgcctccttcagctggggccgcccacacctggagctc
atcaaagagttctgtcagagccgcttcggatggagcagcaggaagacggaggaaacgctg
cagccgatgctcaaacagctccagatgcaacagacgcagctgcgcatcgattcgttcttc
cgtctggagcagcaggagcggcagtcgatccgcagtcagcgtctgcgcagagccgtcacc
tgcctcaagagaaaggaaagagaggaggaagtcgaggaggaggaagaaacgtctccgtct
aagaaggacaggagcggagcctcacagccggacggggcccctggtgccgtggggccgctg
gcgggaggattcgtagagtcagtgcctctcctgaactcgcctgcagacacacaagatgag
acgaggggcggagccacaccaatgatgtcatcgagggcggagtcaagcagctccagctca
gaggatgataatgagtgtgggcggggcgtcgctatggttacagcacgttctgtgtttgag
gggaaaacgagaggaagagggaaacggggaggaagaggaaggagcagaaaccgatga

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