Labeo rohita (rohu): 127165325
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Entry
127165325 CDS
T09007
Symbol
nherf4b
Name
(RefSeq) NHERF family PDZ scaffold protein 4b
KO
K24059
PDZ domain-containing protein 3
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
127165325 (nherf4b)
Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
127165325 (nherf4b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
DUF6288
Lipoprotein_22
Motif
Other DBs
NCBI-GeneID:
127165325
NCBI-ProteinID:
XP_050965765
LinkDB
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Position
5:complement(28072916..28084083)
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AA seq
503 aa
AA seq
DB search
MVNADDTEPVSKPSPRVCVLRREERETFGFRLCEEVEQQGHIIRQLDSLGVAERSGLKDG
DRLLEVNEMFVDNVEHTEVARRIQVSGSHLCFLVLDKKAYERAVSEGHDLKELAEASRGD
GWKPPRLCYIMRDAPGLGLNIQPVEGEKGKFTVSPVKGGAAEKAGVKKGDRLIWIDGAMA
SELPHSAISKLVKKCKNHMTVLVIDSDSEKSYARRKMPILPAMAEAENMPYRPRRLHLAI
GSKGYGFLLRQEKTAAGRTVHMVREVDKGSPAERGSIKEGEMLLEVNGESTESLSHSQVV
SKIRASGQQVTLTTMPPQGQDFYTKLGLSPLLFCVDVTSGSPEELKETPVMVKPAVPSTE
PQEDEQINPNVRRCILERGSAGFGFNLGCVQQKPGTFISQVAAGGPGQSSGLLQGDVVVE
VNGQNVEKESMEDVILHVKRGDALSLLVVDQKGYDWLKKNGKPITVNKLAPISEVEENVS
SPAEPPTLKTGDLSDDSTSEDEN
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatgcagatgatacagagcctgtgtcaaagccctcaccacgtgtgtgtgtgctg
aggagggaagaaagagaaacctttggcttccgtctttgtgaggaagtagagcagcagggt
cacataatcaggcagctggactcactgggagttgcagagaggagcgggctcaaagatggg
gaccgcctgcttgaagtcaatgagatgtttgttgacaatgtggaacatacagaggtggca
cgcaggattcaggtgagtggatcacacttatgcttcctggtgttagataaaaaggcctat
gagcgggctgtgtctgagggtcatgaccttaaagagctggctgaagctagccgtggggat
ggatggaagcctcctcgtctctgctacatcatgagagatgcacctggcctgggcctcaac
atacagccggtggaaggtgagaaaggtaaatttacagtaagtccagtgaaaggaggtgct
gcagagaaggcaggagtgaagaaaggtgaccgactgatctggatagatggtgccatggcc
tctgaacttccacactctgccatcagcaaattggttaagaagtgcaaaaatcatatgaca
gtgctggtgattgacagtgacagtgagaagagttatgcccgtaggaaaatgcccattctc
ccagccatggctgaagcagagaacatgccgtatcggcctcgcagactgcatctggcgata
gggtcaaaaggatatggcttcctgctcaggcaggagaagactgcagcaggacgcactgtc
cacatggtgagagaggtggataagggcagccctgctgaacggggaagtattaaagaaggt
gagatgcttcttgaagtgaatggagagtccacagagtcactgagtcacagtcaagttgtc
agcaaaataagagcgagtggacagcaggtcaccctcacaactatgccacctcaaggtcag
gacttctacactaagttgggcctctctcccttgctgttctgtgtggatgttacatctggc
agccctgaggagctaaaggaaaccccagtgatggtgaagcctgcagtgccctctactgag
cctcaggaggatgagcagatcaatcctaatgttagacgctgtattctggagaggggctct
gctggttttggcttcaatttgggctgcgtccaacagaaacctggcaccttcatcagccag
gtagcagcaggaggcccaggacagagttcaggtctccttcagggtgatgtggtggtggag
gtgaatggacagaatgtggagaaagagtctatggaggatgtgatcttacatgtgaaaaga
ggagatgctctgtctttactagtagtagatcagaaaggttatgactggctgaagaaaaac
gggaagccaatcactgtgaacaaactagccccaatctctgaggtggaggaaaacgtttca
agtcctgctgaaccaccaacactgaagactggtgacttgtctgatgacagtactagtgag
gatgaaaattaa
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