Labeo rohita (rohu): 127165350
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Entry
127165350 CDS
T09007
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
127165350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127165350
Enzymes [BR:
lroh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127165350
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127165350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_5
zf-RING_UBOX
FANCL_C
zf-C3HC4_3
ECSCR
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
127165350
NCBI-ProteinID:
XP_050965810
LinkDB
All DBs
Position
5:44384049..44506356
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AA seq
852 aa
AA seq
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MRVPVRRLAGLWPWLLMAALQVVLGHTGLELAAAVESERSAPRAMIKVSLLKQEPTSRPI
TLEGVFAGGSAGYAEGKLMQSHPLSLCNTSEDDRQESIFISIVKLESPESKVPQCQPLLD
KARLALQRGAQAVIFDITDDPGAAQELRDSGSLPRPVVLVKSSDAEELMGLVNKNEEAMV
FIDIMLETQKWPHYDVGILLTVALVVLAIIMIFALRFRCRSNRTWDSVHQQTMRAISRLE
TRTYSSQGCSGSQRSRGAPGSNCSSNSSPICAICLEEFMDGQELRIISCAHEFHKECVDP
WLLQHRTCPLCMHNIMGKQPQGSDLASRQPQRSRMAPPPPEHSQAFLLPHHYSNQHPYPQ
HHVPFSLRHHYPRNPSGPLPQLGHYSNSPPLHPRTLRCFPSRPLGASCAYHLAPDAHHGR
PHRTGGHGCRTGGHHYAAPRRSCHRCPGGPLRNASGSRMHHVVSSANHPTHHHLPRGGGS
HSRQDDGSCSGGSYHTERSGYLADGPASDSSSGSCHGSSSDSVLNCTDVSLQGVYGSWST
FRSSLSSDYDPFVYCGPGKAPRRGSMEATQRPRSLDSVVNRTAGGSGGDAGAICPEEQQQ
QVAVFSHVHYHRHRHHYYEDGELSQGPGRGSDEDQGATSSAAAAAGPCHVTKDTDSTGCQ
VQHQSCHCPKTDLSSRRVEDRDPDPVSSSGASVILPSPPLTSPSPPCCHKGPGWTTSRKA
AGCPLEAPSPVVHFHQNLDLQDDCSIHIHYGQGAGSYCCTPPPDMAPTLLPVPLILDSTG
MTDWPCCSGAHVVWQKQVQQAHSEPQLLGPTSGMDRPLCRAHHGPGDELPVDICLYCQSL
HNSQGSEEESGV
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgagggttcctgtgcggcgattggccgggctctggccgtggctgctcatggctgccttg
caggtggtgttgggccacacgggcctggaactagccgccgctgtggagtccgaacgctcc
gcaccccgagccatgatcaaggtgtcactgctgaaacaggagcccaccagcaggcccatc
accctagaaggggtgttcgccggtggcagcgcaggctatgctgaggggaaactgatgcag
tctcacccgctgtctctgtgtaacaccagtgaggatgaccgtcaggagagcatcttcatc
agcatcgtcaaacttgagagtccagagagcaaagtgccgcagtgccagccgctgctggat
aaagctcgtctggctcttcagagaggtgctcaggctgtcatctttgacatcacagatgat
cccggtgctgctcaggagctgcgcgattcaggttcattgcctcgtccagtggtgttggtg
aagtcatccgatgcagaagaactgatgggactcgtcaataaaaacgaagaagccatggtg
ttcatagacatcatgttggaaactcaaaaatggcctcactatgacgttggcatcctgttg
actgtggctctggttgtgttggccatcatcatgatctttgctcttcgcttccgctgcagg
tccaacagaacctgggactctgtgcaccagcagactatgcgtgccatcagcaggttggaa
acgcgcacatacagctctcagggttgctctggctcccagcgttctcgcggggctccaggg
tcaaactgcagctccaattccagcccaatctgtgccatttgtcttgaggaattcatggat
ggccaggaattgagaatcatctcctgtgctcatgagttccataaggagtgtgtcgacccc
tggctcctacaacaccgcacctgcccactatgcatgcacaacatcatgggtaaacagcct
cagggttcagatttggcatcccgtcagccccaaaggagtcgaatggccccccctccacca
gagcacagtcaagccttcctccttccccatcactattcgaaccaacacccttatccccag
caccacgttcccttttccctgcggcatcattacccccgtaacccctctggacctttaccc
caattgggccactatagcaactctccccctcttcatccacggactctccgttgttttccc
agtaggccgttgggtgctagctgcgcgtaccacttggctccggatgcccatcacggacgt
ccgcacaggacaggcgggcacgggtgtcggaccggggggcatcactatgcggcccccaga
aggtcgtgccatcggtgccccggaggacctttgcggaacgcttcgggttctcggatgcat
catgtggtgtcgtccgcaaaccatccaactcatcatcacctgccacgtggaggaggctcg
cacagtcggcaagacgacggcagctgctcgggagggagctaccatacggagcggagcggt
taccttgcagacggaccggctagcgattccagctcgggatcgtgccacggctcgtccagt
gactctgtattgaactgtacggatgtcagcctgcagggtgtctatggcagctggtccact
tttcgtagttctctcagcagtgattatgacccgtttgtctactgcggaccaggcaaagct
ccacgcagagggagcatggaggccacgcaaaggcctcgttccctggactcggtagtgaac
cgaactgcgggtggaagcggcggtgatgccggtgccatttgcccggaagaacagcagcag
caggtggctgtgttcagtcatgttcactatcataggcatagacaccactattacgaggac
ggggaactcagtcaagggcccggccgaggctctgatgaggatcaaggggccacgtcctca
gccgctgcagcggctggcccttgtcatgtaactaaagacacagactccaccgggtgtcag
gtacagcaccagtcttgccactgcccaaaaacagacctcagttcaaggagggttgaggat
agagacccagaccccgtttcctcctcaggtgcctccgtgatccttccctcccctccttta
acctctccgtccccaccctgttgccacaaaggcccagggtggacgaccagtcggaaagca
gccggctgtccattggaagcgccttcgccagttgtgcacttccatcaaaacttggacctt
caggatgattgtagcattcatatccactacggacagggagcaggaagctactgctgcaca
cctccgccagacatggcccccacactgctaccggtgcccctcatcttggactcgacgggt
atgaccgattggccgtgctgtagcggggcacatgtggtatggcagaagcaggtgcagcag
gctcattcggagcctcagctcctgggacccacttctggaatggacagacccctgtgtagg
gcccaccatggcccaggggatgaacttcctgtggacatctgtctgtactgccaaagtcta
cacaatagtcaggggtcagaggaagagtctggtgtttga
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