Labeo rohita (rohu): 127165357
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Entry
127165357 CDS
T09007
Symbol
ubb
Name
(RefSeq) polyubiquitin-B isoform X1
KO
K08770
ubiquitin B/C
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03320
PPAR signaling pathway
lroh04120
Ubiquitin mediated proteolysis
lroh04137
Mitophagy - animal
lroh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127165357 (ubb)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127165357 (ubb)
04137 Mitophagy - animal
127165357 (ubb)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
127165357 (ubb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127165357 (ubb)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127165357 (ubb)
Ubiquitin system [BR:
lroh04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
127165357 (ubb)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of breast milk
127165357 (ubb)
Exosomal proteins of other body fluids (saliva and urine)
127165357 (ubb)
Exosomal proteins of colorectal cancer cells
127165357 (ubb)
Exosomal proteins of bladder cancer cells
127165357 (ubb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
127165357
NCBI-ProteinID:
XP_050965838
LinkDB
All DBs
Position
5:complement(20538654..20542553)
Genome browser
AA seq
763 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGSDI
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtcaaaaccctcactggtaagaccatcacccttgaggtcgagccaagt
gacaccattgagaatgtgaaagccaagatccaggataaagaaggcattccccctgaccag
cagaggttgatctttgccggcaaacagctagaagatggccgcacactgtctgactacaac
atccagaaagagtccaccttgcatctggtgctacgtctcaggggaggcatgcagatcttt
gtcaagaccttgacaggcaaaaccatcacccttgaggttgagccaagtgacacaattgag
aatgtgaaggccaaaatccaggacaaagaaggcattccccctgaccagcagaggttgatc
tttgccggcaaacagctagaagacggccgcacactctcagactacaacatccaaaaagaa
tccaccttgcatctggtgctgcgtctcaggggaggcatgcaaatcttcgtcaagaccctc
actggcaaaaccatcacccttgaggttgagccaagtgacaccattgagaacgtcaaggcc
aagatccaggacaaagaaggcattccccctgaccagcagaggttgatctttgccggcaaa
cagctagaagacggccgcacactctcagactacaacatccaaaaagaatccaccttgcat
ctggtgctgcgtctcaggggaggcatgcaaatcttcgtcaagaccctcactggcaaaacc
atcacccttgaggttgagccaagtgacaccattgagaacgtcaaggccaagatccaggac
aaagaaggcattccccctgaccagcagaggttgatctttgccggcaaacagctagaagac
ggccgcacactctcagactacaacatccaaaaagaatccaccttgcatctggtgctgcgt
ctcaggggaggcatgcaaatcttcgtcaagaccctcactggcaaaaccatcacccttgag
gttgagccaagtgacaccattgagaatgtgaaggccaaaatccaggacaaagaaggcatt
ccccctgaccagcagaggttgatctttgccggcaaacagctagaagatggccgcacactc
tcagactacaacatccagaaagaatccaccttgcatctggtgctgcgtctcaggggaggc
atgcaaatcttcgtcaagaccctcactggcaaaaccatcacccttgaggttgagccaagt
gacaccattgagaatgtgaaggccaaaatccaggataaagaaggcattccccctgaccag
cagaggttgatctttgccggcaaacagctagaagacggccgcacactctcagactacaac
atccagaaagaatccaccttgcatctggtgctgcgtctcaggggaggcatgcaaatcttc
gtcaagaccctcactggcaaaaccatcacccttgaggttgagccaagtgacaccattgag
aatgtgaaggccaaaatccaggacaaagaaggcattccccctgaccagcagaggttgatc
tttgccggcaaacagctagaagacggccgcacactctcagactacaacatccagaaagag
tccaccttgcatctggtgctgcgtctcaggggaggcatgcaaatcttcgtcaagaccctc
actggcaaaaccatcacccttgaggttgagccaagtgacaccattgagaatgtgaaggcc
aaaatccaggacaaagaaggcattccccctgaccagcagaggttgatctttgccggcaaa
cagctagaagacggccgcacactctcagactacaacatccagaaagagtccaccttgcat
ctggtgctgcgtctcaggggaggcatgcaaatctttgtcaagaccctcactggcaaaacc
atcacccttgaggttgagccaagtgacactattgagaatgtgaaggccaaaatccaggac
aaagaaggcattccccctgaccagcagaggttgatctttgccggcaaacagctagaagac
ggccgcacactctcagactacaacatccagaaagagtccaccttgcatctggtgctgcgt
ctcaggggaggcatgcaaatcttcgtcaagaccttaacaggcaagaccatcacccttgag
gttgagccaagcgacaccattgagaatgtcaaggcaaagatccaggacaaagaaggcatt
ccccctgaccagcagaggctgatctttgctggcaaacagctggaagatggtcgtaccctg
tccgactacaacattcagaaagagtccaccttgcatcttgtgctgcgtcttaggggaggt
tcagatatttaa
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