Labeo rohita (rohu): 127165390
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Entry
127165390 CDS
T09007
Symbol
hnrpkl
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein K, like isoform X1
KO
K12886
heterogeneous nuclear ribonucleoprotein K
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127165390 (hnrpkl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lroh03041
]
127165390 (hnrpkl)
Spliceosome [BR:
lroh03041
]
Common components
Common spliceosomal components
hnRNP proteins
127165390 (hnrpkl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
ROKNT
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_Vigilin
MOEP19
DJ-1_PfpI
Glyco_tran_WecG
Motif
Other DBs
NCBI-GeneID:
127165390
NCBI-ProteinID:
XP_050965937
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Position
5:complement(8390018..8405802)
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AA seq
433 aa
AA seq
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METEIEQQEEETTFSNTDTNGKRPAEDMDEEQAFKRSRNTDEMVELRVLLQSKNAGAVIG
KGGKNIKALRTDYNASVSVPDSSGPERILSVSADIETIGEILLKIIPTLEEYQHYSGTDF
DCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLVGGKPERVV
ECIKVILELISEAPIKGRAQPYDPNFYDETYDYGGFTMMYEERGRRPMGGFPMRGRGGFD
RMPPGRGGRPMPPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRGGGDRF
SHQSYHSSMDDRPNSDRRGRPGDRYESMSGGGYDNNSSWEPFQSGGRGSYSDIGGPVITT
QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYL
LQNSVKQYSGRFF
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggagacagaaattgagcagcaggaagaagagaccactttcagtaacactgacactaac
ggcaagcgccctgctgaggacatggatgaggaacaggcattcaaacgctcccgcaacaca
gatgaaatggtagagctcagggtgcttctccaaagcaaaaacgcaggggctgtgattgga
aaggggggcaagaacattaaagccttacgcacagactacaatgccagtgtatcagtccca
gacagcagtggcccagagcgtatcctgagtgtgagtgcagatatagagactattggtgag
attctgctgaagatcatccctaccttggaggagtatcagcattacagtgggactgacttt
gactgtgagctgcgtctgctgattcatcagagtctggccggaggcattattggagtcaaa
ggtgccaagatcaaggaactgagggagaatacccagactacaatcaagctcttccaggaa
tgttgcccccactccactgaccgcgtagtgctagtcgggggtaaacctgagcgtgtggtt
gagtgcatcaaggtcattctagagctgatttcagaggctcccattaaaggtcgagcccag
ccctatgacccaaacttttatgatgagacatatgactatggtggcttcactatgatgtat
gaagaaagagggcgacggcctatgggtgggttcccaatgcgaggtcgaggaggattcgat
cggatgcctcctggccgtggaggtcgtcccatgcctccatccagacgggattatgatgac
atgagccctcgtcgtggaccacctccacccccaccagggagaggaggacgtgggggcagt
agggcccgaaatctgcctctgcctccgccaccaccacctagaggaggaggtgaccgattt
tcccaccagagctatcacagcagtatggatgacagaccaaacagtgaccgaagggggcga
cctggagaccgctacgagagcatgagtggaggtggatatgacaataattcttcttgggag
cccttccaatcaggtggtcgaggttcttacagtgacattggtggacccgttattacaaca
caagtgactatccctaaagatctggctggctctatcattggaaaaggcggccagaggatc
aagcaaatccgtcatgagtcgggagcatctattaaaatcgatgagcctctggagggctca
gaggacaggatcattaccatcacaggcacacaggaccagattcagaacgcccagtatcta
ctacagaacagcgtgaagcagtactctggtcggttcttctag
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