Labeo rohita (rohu): 127165407
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Entry
127165407 CDS
T09007
Symbol
smyd1a
Name
(RefSeq) histone-lysine N-methyltransferase SMYD1a
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh00310
Lysine degradation
lroh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
127165407 (smyd1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127165407 (smyd1a)
Enzymes [BR:
lroh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
127165407 (smyd1a)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
127165407 (smyd1a)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
127165407 (smyd1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
TPR_12
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
127165407
NCBI-ProteinID:
XP_050965965
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Position
5:complement(6247907..6267098)
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AA seq
484 aa
AA seq
DB search
MTVEKMDPVEVFSAGEKGRGLRVTKEMKAGEVVFAEASFAAVVFDSLSLQVCHSCFRRQA
NPHRCAQCKFAHYCDRTCQRAAWEEHKQECSAIKKIGKAPNENVRLVARILWRIQKDTGL
VSDAQLTTLDLLEDHLSKMSPEDLKELKVDVQHFYNYWPKKSKPVGEDYVSHLFGVINCN
GFTLSDQRGLQAVGVGLFPNLCLVNHDCWPNCTVILNPGNQTALDASFHSKRRIELRALG
MIPEGEELTVSYVDFLNVSKDRQRLLKQQYYFDCKCEHCTNGIKDDLMTAVKDTDGHKPS
ADVVKAVTDFSLQALVKIEEARTEGNFHEVVRMCRECLEKQDPVFGDTNLHLLRVLSTAS
EVLSFMQQFTEAAGYAQRMVDGYTKLYHPNNAQLGMATMRAGVTHWHAGLIEAAHGLICR
AYGILMITHGAHHPITKDLESMRMQTEMELRLFKQNELVYRNMREAMLSAKPTMLAGEQI
KTTS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtggaaaagatggatcctgtggaagtgttttcagccggggagaaaggccgtggc
ctccgtgtcaccaaggagatgaaagctggagaggttgtgtttgctgaagcgagcttcgct
gcggttgtgtttgacagtctctctctgcaggtgtgtcacagctgtttccgccggcaggcg
aaccctcaccgctgcgcccagtgcaaatttgcccactactgcgaccgcacgtgccagcgt
gccgcatgggaggaacacaagcaagaatgttctgccattaaaaagataggaaaagctccc
aatgagaatgtgcgtctggtcgctcgtatcctgtggcgtattcagaaggacactggtctg
gtctccgacgctcagctcaccaccctcgacctcctggaggatcacctgtccaaaatgtcc
cccgaggacctgaaagagctcaaagttgacgtgcaacacttctacaattactggcctaaa
aagagcaaaccagtcggagaggactatgtgtcgcatctctttggtgtgattaactgcaat
ggtttcacactgagcgatcagaggggtcttcaggcggtcggcgtgggtctctttcctaac
ctgtgtttggtcaatcacgactgctggcccaactgcactgtcattctcaatcccggcaat
cagacggctctggacgcttcattccactcaaagagaaggatcgagctgagggctctgggg
atgatccctgaaggagaagagctgaccgtcagctatgtggacttcctaaacgtgtccaag
gaccgccaacggctgctcaagcagcagtattacttcgactgcaaatgtgagcactgcacc
aacggcatcaaagatgacctgatgacggccgtcaaagacaccgacggacacaagccgtct
gctgatgtggtgaaggcggtgacagatttcagtcttcaggctctggttaagatcgaagag
gctcgtactgaaggaaacttccatgaggtggttaggatgtgtcgcgagtgtttggagaag
caggatccagtgtttggagacacaaacctgcatctgctgcgcgtcctcagcaccgccagt
gaggttctgtccttcatgcagcagttcaccgaggcggcgggttacgcgcagcgcatggta
gacggatacacgaagctctatcaccccaataacgcgcagctgggcatggccactatgaga
gcgggcgtcacgcactggcacgctggcctgatcgaggccgctcacgggctaatctgtcgc
gcctacggcattctcatgatcacacacggagctcatcaccccatcaccaaagacctggag
tcgatgcggatgcagacggagatggagctgcgtttgttcaagcagaatgagctggtctat
cgcaacatgagggaggccatgctaagcgccaaacccacgatgctcgctggagagcaaatc
aaaactacttcataa
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