Labeo rohita (rohu): 127165414
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Entry
127165414 CDS
T09007
Symbol
gria3a
Name
(RefSeq) glutamate receptor 3a isoform X1
KO
K05199
glutamate receptor 3
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04080
Neuroactive ligand-receptor interaction
lroh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127165414 (gria3a)
04082 Neuroactive ligand signaling
127165414 (gria3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lroh04040
]
127165414 (gria3a)
Ion channels [BR:
lroh04040
]
Ligand-gated channels
Glutamate (ionotropic)
127165414 (gria3a)
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF2061
Motif
Other DBs
NCBI-GeneID:
127165414
NCBI-ProteinID:
XP_050965978
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Position
5:32870166..32918621
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AA seq
886 aa
AA seq
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MRRRAHASVLLLPWLVLQTQAGFPNQINIGGLFMRSTVQEHSAFRFAVQLYNTNQNVTEK
PFHLNYNVDNLESSNSFSVTHAFCSQFSRGVYAIFGFYDRRSMNTLTSFCGALHTSFITP
SFPTDTDVQFVLQMRPSLRGALLSLLAHYKWEKFVYLYDTDRGFAILQAIMESAVMNNWQ
VTARSVGNIVDPLEYRRIIEEMDRRQEKRFLIDCEVERINSILEQVVISGKNSRGYHYIL
ANLGFSNMSLDKVFSGGANITGFQIINPESPIVQQFLQRWERLDEREFPESRNAPLKYTS
ALTHDAILVIAEAFRYLRRQRVDISRRGSAGDCLANPAVPWSQGIDIERALKMVQVQGMT
GNIQFDSFGRRSNYTIDVYEMKPGGARKIGYWNEYEKFVYIVEQQVTNESSSVENRTIVV
TTIMEAPYVMYKRNYMQLEGNDRYEGYCVDLASEIAKHVGIKYKLSIVADGKYGARDPET
KTWNGMVGELVYGRADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSF
LDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHLDENEEAKDPQTPPDPPNDFGIFNS
LWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESA
EDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFVKTTPDGVARVRKS
KGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRSAVNLAVLKLNEQ
GLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLAMTVALVEFCY
KSHQETKRLKLAKNAQNFKPAPPSTAQSFTTYREGYNVYGTESVKI
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgcggcggcgagcgcacgccagcgtcctgctcctgccgtggctggtgctgcaaacccag
gcaggctttccaaaccagatcaatatcggtggtctcttcatgcgctccactgtccaggaa
cacagcgcgttccgcttcgccgttcagctgtacaacaccaatcagaacgtcaccgagaaa
ccctttcatctgaattataacgtggacaatctggagtcatccaatagcttttcagtcacg
cacgcgttctgttctcagttctccaggggtgtatatgcaatatttggattctacgacagg
aggtcaatgaacacattaacgtcgttctgcggcgctctgcacacctccttcatcactcca
tcttttcccacggacacagatgtgcagtttgtcctgcagatgaggccgagcctccggggg
gcgctgctcagtttgctagcccattataaatgggagaaatttgtctacctttatgatact
gatagagggtttgccatcctacaggccatcatggaatctgcagtaatgaataattggcag
gtgacggcacgttcggtggggaacatagtggatccgctggaataccggcgcattattgaa
gaaatggatcgtcggcaggagaaacgtttcctcatcgactgtgaggttgaacgtattaac
agtattctagagcaggtcgtgatctcaggaaagaacagccgaggatatcattacatcctg
gctaatcttggattttctaacatgagtttggataaggtgttttctggtggagcaaatatt
accggattccaaattataaatcctgagagcccgattgtgcagcagttccttcagcgctgg
gagcggcttgatgagagagagtttcctgagtctagaaacgctcccctaaagtacacctct
gcactgacacatgatgccatcctggtgatagccgaagcatttcggtatctgagacgtcag
cgtgttgacatttctcgtcgagggagtgcaggcgattgccttgccaatccggctgtacca
tggagccagggaatcgacattgagagagctctcaaaatggttcaggttcagggtatgacg
ggaaatattcagtttgactcatttggacggcgatcaaattacaccattgatgtttatgaa
atgaagccaggaggagccagaaagattggctactggaatgaatatgagaaatttgtttat
atagtggagcagcaggttaccaacgaatcctcctctgtggaaaacagaaccattgtggtc
actactattatggaagctccatatgtaatgtacaagaggaattatatgcagttggaaggg
aatgatcgctatgagggctactgtgtagacttggcgtcagaaatcgcaaagcatgtgggc
ataaagtacaaactgtccattgtggctgatgggaaatacggagcacgcgaccctgagacc
aagacctggaacggcatggtgggggagttggtatatgggagggcagatatagctgtggct
cctctcactataacccttgtccgggaggaggtgatagatttctccaagcccttcatgagt
ctgggcatttccatcatgatcaagaaaccccagaagtccaaaccaggagtcttctccttc
ctggatccgctggcctatgagatctggatgtgtatcgtgtttgcatatatcggtgtgagc
gtggttctcttcctggtgagtcgtttcagtccatacgaatggcacctggatgagaacgaa
gaggcgaaggatccgcagacgccccccgaccctcccaacgacttcggcatctttaacagt
ctctggttctctcttggagctttcatgcagcaaggatgcgatatctcgccaaggtctctg
tctggccgtattgttggaggtgtttggtggttcttcactctgatcatcatttcatcctac
actgccaatctggctgctttcctgactgtggagaggatggtgtcgcctatagagagtgca
gaagacctggccaagcagactgagatcgcctatggaacacttgactccggttccaccaaa
gagttcttcaggcgttcaaagatcgctgtctacgagaagatgtggtcttacatgaagtct
gccgagccgtccgtgttcgttaagaccacccctgacggagtggctcgtgtgcgcaagtcg
aaggggaagttcgcgttcctgctcgagtccacgatgaacgaatacatcgagcagagaaag
ccgtgtgacactatgaaggtgggagggaacctggactccaagggctacggtgtggccacg
cccaaagggtcggcattaagaagtgctgtaaacctggcggtgttaaagctgaatgagcag
ggcctgctggacaagctgaaaaataaatggtggtacgacaagggagagtgcggcagcggg
ggaggggactcgaaggataagaccagcgcgctgagtctcagtaacgtggctggcgtgttc
tatatcctggtggggggtctgggtctggccatgactgtggctttggtggagttctgctat
aagtcgcaccaggagaccaaacgcctcaaacttgccaaaaatgcccagaacttcaaacca
gctcctccatccaccgcacagagtttcaccacgtacagagagggctataacgtctacggc
acagagagcgtcaaaatataa
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