Labeo rohita (rohu): 127165504
Help
Entry
127165504 CDS
T09007
Symbol
fubp3
Name
(RefSeq) far upstream element-binding protein 3 isoform X1
KO
K13210
far upstream element-binding protein
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127165504 (fubp3)
03041 Spliceosome [BR:
lroh03041
]
127165504 (fubp3)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
127165504 (fubp3)
Spliceosome [BR:
lroh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
127165504 (fubp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
FUBP_C
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
127165504
NCBI-ProteinID:
XP_050966147
LinkDB
All DBs
Position
5:46233083..46264820
Genome browser
AA seq
582 aa
AA seq
DB search
MMMMAELVQGQASVAQPGMKADGFTDPFHRARQSVVCADVLQIAKMGGEQMQHLNNSSPV
VDAALYGYGGQKRSLDEGVANQLGAMVHSTRAIITEDFKVPDKMVGFIIGRGGEQITRIQ
LESNCKIQIAADSGGMMDRPCTLTGTPESIEQAKRLLGQIVDRCRNGPGFHNQMDGNSAV
QEILIPASKVGLVIGKGGDTIKQLQERTGVKMIMIQDDPMPTGSDKPLRITGDPYKVQQA
RELVVEIIRDKDQGDFRSGRSDFGSRLGSSIDVAVPRFAVGIVIGRNGEMIKKIQNDAGV
RIQFKPDDGISPDRIAQVMGQPDRCQHAVHLINDLVHTAQERDGFGGPVGPRGRGRGRGD
WNMGTPGGLQEVTYTIPADKCGLVIGKGGETIKNINQQSGAHVELQRNPPPNTDPNVRIF
SIRGSPQQMEMARQLIDEKIGASGMGGSSSFGLSPFTQGPATPHQNGPQTFMTGGWGTTY
QTWQPQSQQDPSHNGSQTGQMDYSKAWEQYYKKLGQQNQGQSSGPDYSKAWEEYYKKQTQ
AAGPGSQQSSPPDYSAAWVEYYRQQGAYYGQGQTQAPGLPDH
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcggagctggtgcagggacaggcctcggtggctcagcccgggatgaag
gcggacggattcacggacccgttccaccgcgcacgacagagtgtggtttgcgctgatgtc
ttacagattgctaagatgggaggagagcagatgcagcatctgaacaactcgtctccagtc
gtcgatgccgcgctgtacggctatggagggcagaaacgctcgctggacgaaggagtggct
aaccagctcggtgcaatggtacatagtacaagggctataataacagaagacttcaaagtg
cctgataagatggttggattcatcattggacggggcggcgaacagatcacaagaattcag
ctggaatccaactgtaagatccagatcgctgctgacagtggaggtatgatggataggcct
tgcaccctgactgggaccccagaaagtattgagcaggccaagaggttgttggggcagatc
gtggaccggtgtcgaaacggaccgggcttccataatcagatggacgggaacagcgccgtc
caggagatcctgatcccggccagtaaagtcggcctggtcatcgggaaaggaggcgacacc
atcaaacagcttcaggagaggacaggagtaaagatgatcatgattcaggacgacccgatg
cccactggatcagacaaacccttgagaatcactggagacccttataaagttcagcaagcg
cgggagctggtggtcgagatcatcagggacaaggatcagggagatttcaggagcggccgc
agcgacttcggctccagactgggcagcagcatcgacgtggcagtgcccaggttcgcagtg
ggaatcgtcatcggcagaaacggcgagatgatcaagaagattcaaaacgatgcaggagtc
aggatccagttcaagccagatgatgggatcagtccggaccgaatcgctcaggtcatgggt
cagccggaccgatgtcagcacgccgttcacctcatcaatgatctggtccatacagcacag
gagcgcgatggcttcggagggccggttggacccagaggtcgtggcagaggtcgcggcgat
tggaacatgggaactcctggaggcctgcaggaagtgacctacacaatacccgctgataag
tgcggccttgtgatcggaaaaggtggagagaccataaagaacatcaaccagcagtccgga
gctcatgtggagctgcagagaaatcctcctccaaacaccgaccccaacgtcaggatcttc
tccatccgtggatctcctcagcagatggaaatggccagacaactgatagacgagaagatc
ggggcgtctggaatgggaggaagcagcagttttggactcagtcctttcacccaaggacca
gcgactcctcatcagaacgggccgcagacgttcatgactggaggttggggaaccacgtac
cagacatggcagcctcagagccagcaggaccccagtcacaatggatctcagaccggccag
atggactattccaaagcgtgggagcagtattataaaaagctaggtcaacagaaccaaggc
cagagcagcggccctgactacagcaaagcatgggaggagtattacaagaaacagactcag
gcagccggtcctggatctcagcagagctctcctccagactacagcgccgcctgggtggag
tattacagacagcagggggcgtattacggccagggacagacgcaggctcccgggctcccg
gatcattaa
DBGET
integrated database retrieval system
