Labeo rohita (rohu): 127165586
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Entry
127165586 CDS
T09007
Name
(RefSeq) RNA-binding protein Musashi homolog 1
KO
K14411
RNA-binding protein Musashi
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127165586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127165586
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
127165586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
NID
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
127165586
NCBI-ProteinID:
XP_050966302
LinkDB
All DBs
Position
5:42731747..42769043
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AA seq
350 aa
AA seq
DB search
MDTEGSQSSLSSSTQDSPHDPCKMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTK
RSRGFGFVTYVDQTGVDKVLAQNRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSV
NTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKM
VECKKAQPKEVMSPTGTARGRSRVMPYGMDAFMLGIGMLGYPGFQAATYASRGYTGITPG
YTYQFPEFHLERTPLLTSSHPPEITAIPLTAYGPMAAAAAAAVVRGSTPSRTAGFLGTSS
PGPMADLYAAANQDSGVSSYISAASPAPSTGFGHGLGGPLIATAFTNGYH
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggacacagaagggagtcagagcagcctgtcgtcctccacgcaggactccccgcacgac
ccctgcaaaatgttcatcggcgggttgagctggcagacgacacaagaggggctgaaggaa
tacttttgtaaattcggcgaggtgaaggagtgtatggtgatgcgggatccggttacgaag
cggtcgagggggtttggatttgtcacctacgtagaccagaccggtgtggataaagttttg
gcccaaaacagacacgagctggattccaaaacaattgaccctaaggtggccttcccacgc
agagctcagccgaagctggtaacaagaacaaagaagatctttgttggaggactgtctgtc
aacaccaccatcgaagacgtgaaacagtatttcgatcagttcggaaaggttgatgacgcg
atgctaatgtttgacaaaaccaccaacaggcacagaggttttggctttgtgacctttgag
aatgaagacgtggtggaaaaggtctgcgagatccactttcacgagatcaacaacaagatg
gtggagtgcaaaaaggcgcagccaaaggaagtgatgtcaccgacaggtacggcgcgaggc
cgctccagggtgatgccctatggcatggacgccttcatgctgggtatcggcatgctgggt
tacccaggattccaggcggccacttacgccagtcgtggatacacaggaatcacaccggga
tacacgtaccagttcccagaattccatttagaacggacaccccttctgacttcctctcac
cccccagagatcacagccattccactgacagcctacggaccaatggcagcagccgcagct
gcagcggtggtcagaggttccaccccctcacgtaccgcaggcttcctgggcaccagcagc
cctgggccaatggcagacctgtatgcagcagccaatcaggattcaggagtcagcagctat
atcagtgcggcaagtcccgcccccagcacagggttcggacatggactcgggggtcctttg
attgcaacggcctttactaatggctaccactga
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