Labeo rohita (rohu): 127165614
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Entry
127165614 CDS
T09007
Symbol
ungb
Name
(RefSeq) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
127165614 (ungb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lroh03400
]
127165614 (ungb)
Enzymes [BR:
lroh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
127165614 (ungb)
DNA repair and recombination proteins [BR:
lroh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
127165614 (ungb)
Prokaryotic type
127165614 (ungb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
127165614
NCBI-ProteinID:
XP_050966367
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All DBs
Position
5:complement(27228745..27232337)
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AA seq
260 aa
AA seq
DB search
MSKEQVSGENMQLSEEQLHQIEQNRRAALERLAKRNVPVPVGESWRKKIGTEFTKPYFTK
LMSFVTMERKCFTVYPSPEQVFHCTTLCAIEDVKVVILGQDPYHHPGQAHGLAFSVLRPK
PPPPSLENIFMELKEDIVGFRHPGHGDLTGWAKQGVLLLNSVLTVRAHQPTSHEGQGWEI
FTDAVVLWLSRNLNGLVFLLWGSYAQRKGRVIDRKRHRVLETSHPSHYSAHLGFFGCRHF
SKTNTLLKASGKKPIDWTAL
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagagcaagttagcggtgagaacatgcagctcagtgaggaacagctgcatcag
atagagcaaaacagacgcgctgcactggaacgactggccaaacgaaatgtacctgtaccc
gttggtgaaagctggcgaaaaaaaattgggactgaatttacgaaaccttattttacaaaa
ctaatgtcttttgttacaatggagaggaaatgctttactgtgtatcccagccctgagcag
gtgtttcattgtacaactctgtgtgcaattgaagatgtaaaagtggtcattcttggacaa
gacccctatcaccatccaggtcaggctcatggtttggccttcagtgtgctgaggcctaaa
cctcctcctcctagtttggaaaacatatttatggagctgaaagaagatattgttggcttc
cggcacccaggtcatggagacctcacaggatgggctaaacagggtgttctgctgctgaat
tctgtgttaacagtgagggctcatcaacccacctctcatgagggtcaaggctgggagatc
ttcacagatgctgtggtcctgtggctcagcaggaacctcaatggcctggtctttctgctt
tggggctcttatgctcagaggaaaggcagagtgattgacagaaaacgtcatcgtgtcctt
gagacttcacatccatcacattactcagcacatttaggcttctttggatgcaggcacttc
tctaaaactaacacgctacttaaagcatccggaaagaagccgattgattggacagctctc
tga
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