Labeo rohita (rohu): 127165625
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Entry
127165625 CDS
T09007
Symbol
zgc:163098
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127165625 (zgc:163098)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lroh03041
]
127165625 (zgc:163098)
Spliceosome [BR:
lroh03041
]
Complex A
U2 snRNP components
U2 related factors
127165625 (zgc:163098)
Complex B
127165625 (zgc:163098)
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Paralog
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Motif
Pfam:
Surp
RRM_1
CID
cwf21
CTK3
RRM_7
SET_assoc
Motif
Other DBs
NCBI-GeneID:
127165625
NCBI-ProteinID:
XP_050966383
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Position
5:complement(23492121..23507841)
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AA seq
882 aa
AA seq
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MECKNKVDMADKKGKSVGVKRTLTKREQEEIKKKEEEKAAEVFEEFIASFDTNEKSGVKT
FVRGGIVNATKEEEAAEVKKSKLYRPASKFTSPPQNASPVQPAEVKKTAVKKKVEEKKKS
NLELFKEELKQIQEEREERYKRKKGDSGGVYPDVDLPLTRRSIFDDDPAVPNTTNLYIGC
INPKMTEEMLCKEFGKYGPLASVKIMWPRTEEERTRVTNRGFVAFMTRKDAERALAALDG
KTIMGFEMKLGWGKAVRIPPQPLYTPIGVLKTTAPPPPSGLPFNAQPRDRFRNDFTKPRS
RSQEDFYKTLSEAVVTVVIPPERNLLGLIHRMIEFVVREGPMFEAIIMSREKNNPDFRFL
FDNKSQEHVYYRWKLYSILQGENPNKWRTSPFRMFRGGSLWKPPLLNPYLHGDEEPEESS
FPSQEEEPKKGHLKAEHRERLEALLRGLNPRRDEIGDAMLFCLERAEAAEEVVSCITESL
SIAHTPLQKKIARLYLISDILYNSCAKVANASYYRKFFETKLPQIFGDISEAYRNIQARL
QAEQFKQRVMGCFRAWEDWAVYPDSFLIQLQNIFLGLIKPGEEVIERPEPKSPDLDGVPL
DGISLERGEIDGTPLDDLDGSPLNWDPSSIDGVPVDDIDGVPLGNSIDDIDGVPFDEGAD
KTLPTVALSKWEKVEDSESSAKNDSDTEVNSSGLKENDGDSDMSSDEADSPSRYEGAEFK
SSLRNFELSESKRTRLRELEVKVMNFQDELESGKRQRKSSMTLQQQVQHYRNRLLQKEFD
KDDQEKRDKYSQKQKDRSKKDERRDKGEDRSKTRDKEKSRKSEDRERSRGRSRDKDERRE
RTRSRSPRKSKRSRSPSPQHKSWRSSSRSPHRSHKKTKKSKH
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggagtgcaaaaataaagttgacatggcagataaaaaagggaaatctgtgggggtgaag
aggacactaacaaaaagagaacaagaggaaattaagaaaaaggaggaggagaaagctgct
gaagtctttgaggaatttatagcttcttttgacactaatgaaaaaagtggagtgaagacg
tttgtacggggaggcattgtaaatgcaactaaagaggaagaagccgccgaggtgaagaag
agcaaactttacagacccgcctctaaattcacttctccacctcagaatgcttcacctgtt
caacctgcagaagttaaaaaaactgctgttaaaaagaaagtggaagagaagaagaagagt
aatctggagctttttaaagaggaattaaaacaaatacaggaagagagagaggagcgatac
aaaaggaagaaaggtgactctggaggtgtatacccagatgtggatttacctctgacacga
cgatcaatatttgatgatgatcctgcagtgccaaacacaacaaacctgtacatcggctgc
atcaaccccaagatgacagaagagatgctctgtaaggagtttgggaagtacggtcctctg
gccagtgtgaagatcatgtggcctcgaactgaagaagagagaacaagagtcaccaaccgc
ggttttgttgctttcatgacacggaaggatgcagagcgtgctttggctgcactggatggt
aaaacaataatgggtttcgaaatgaagctaggttgggggaaggcagtacgtattcccccg
caacctctgtacacccccatcggggtgctgaagaccactgccccccctccaccctctgga
ctgccgttcaacgcccaacccagagaccgcttcagaaatgacttcaccaaaccacgcagc
cgctcacaggaagacttttacaagactctgtccgaggccgtagtgacagtggtaatcccc
ccagaaaggaacctgctgggcttgatacacagaatgattgagtttgtggtgagagaggga
cccatgtttgaggccatcatcatgagccgggaaaagaacaaccctgacttcaggtttttg
tttgataataagagtcaggaacatgtgtactacagatggaaactctactccattctacag
ggagagaacccaaataaatggagaacatcaccattcagaatgtttcgaggcgggtcttta
tggaagccacctctccttaacccatatctccatggtgatgaggaaccagaagagagctcc
ttcccttctcaagaggaggagccaaagaaagggcacctgaaggcagagcacagagagagg
ttggaggccttgctgagagggctgaatcctcgcagggatgagattggtgatgcaatgcta
ttttgcctggagagagcggaggctgccgaggaagtcgtctcttgtatcactgaatctctg
tctatagcacacacaccgctgcagaagaagattgccagactttacctgatatcagacatc
ctctacaactcctgtgccaaggttgccaatgcatcttattaccgcaaattttttgagaca
aagctgccgcagatattcggagacatcagtgaagcgtatcggaacatccaggcccgactc
caggcagagcagtttaagcaaagagttatgggatgttttcgcgcgtgggaagactgggca
gtttatccagactccttcctgatccaactgcagaatatattcctggggcttatcaaacct
ggagaggaagtcattgagagaccagagcccaagtctcctgatctggatggggtaccattg
gatggtatttctctagagagaggtgaaattgatggtacaccccttgatgaccttgatggg
tcacctttgaactgggatccatcctctatagatggtgtaccggttgacgacatcgacggt
gttcccctaggaaactctatagacgatattgatggtgtgccatttgatgagggcgcagat
aagactttacccactgttgcactgtctaaatgggagaaggtggaggattcagaatcctca
gccaagaatgactcagacaccgaagtaaattcaagtggcctgaaggaaaacgatggtgac
tctgatatgagcagtgatgaagctgacagccccagcaggtatgagggggcggagtttaag
agttctctgagaaactttgaactgtctgaaagcaaaaggacacgcctccgagaactggag
gtgaaggtgatgaattttcaggacgagctggagtcgggtaaaagacagaggaagtccagt
atgactctgcaacagcaggttcaacactacagaaacagactgctacaaaaggagtttgac
aaggacgaccaggaaaagagagacaaatattcacaaaaacagaaagaccggtccaaaaaa
gacgagcgaagagataaaggggaggacaggagtaaaacaagggataaagaaaaaagtaga
aagagtgaggacagagaaaggagcagaggaaggagtcgagacaaagacgagaggagagag
agaacaagatcccgatcaccgcgcaagtcaaaacgctctcggtcgccttcaccacagcac
aaatcctggaggtcatcgtcccgatcaccacatcgctcgcacaaaaagaccaagaagagc
aaacactga
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