Labeo rohita (rohu): 127165626
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Entry
127165626 CDS
T09007
Symbol
trpv4
Name
(RefSeq) transient receptor potential cation channel subfamily V member 4 isoform X1
KO
K04973
transient receptor potential cation channel subfamily V member 4
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
127165626 (trpv4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lroh04040
]
127165626 (trpv4)
Ion channels [BR:
lroh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
127165626 (trpv4)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Ank_5
Ank_4
GCP_N_terminal
Motif
Other DBs
NCBI-GeneID:
127165626
NCBI-ProteinID:
XP_050966386
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Position
5:35352193..35382059
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AA seq
868 aa
AA seq
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MSEQGFSASTLLKRYRLAMTEANSVSSLSGTVAEEPSEGKDLSAEGDPNFPMSALSELLD
NDDGSQPTQDSSQDSARPGPQNDNKQNSRIRFPGAFKKNPMDLLESTMSEYPVAPGPKKA
PMDSLFDYGTCREVNNQKKRRKKLPRGKAEVEMSCDEGSPEPPVLKVFNRWLLFEAVSRA
DRRALDGLLQYLQSHEKRLTDEEFKEPSTGKTCLPKALLNLHNGHNDTIPVLVDIAEQTG
NLREFINTPFRDVYYRGQTALHIAIERRCKQYVELLVEKGADVHAQARGRFFQPREEGGY
FYFGELPLSLAACTNQPDMVHYLTENSHKAADLRRQDSRGNTVLHALVRIADNTRDNTRF
VTKMYDLLLIKCAKLYPDCNLENVLNNDGMSPLMMAAKLGKIGVFQHIIRREIKDEEVRH
LSRKFKDWAYGPVYSSLYDLSSLDTCGEEVSVLEILVYNSRIENRHEMLAVEPINELLRA
KWQKFAAVTFYISVVSYLVTMIIFTLVAYYRPSVGKPPYSYNTTEDKLRLAGEIITVLSG
VFFFITNIKDLFLKKCPGVNSLFIDGSFQLLYFIYSVLVLVSAALYLSGIEAYVCVMVFA
LALGWMNTLYFTRGLKLTGTYSIMIQKILIKDLFRFLLVYVLFMIGYASALVSLLAICPD
NKTCNGTCPKYPECRDTEPFSEFLLDLFKLTIGIGELDDMLKGAKYPVVFLILLVTYIIL
TFVLLLNMLIALMGETVGQVSKESKQIWKLQWATTILDIERSFPVCLRKSFRVGEMVTVG
KGLDGTPDKRWCFRVDEVKWSHWNQNLGIINEDPGQKDLYEQTQGGRGLRRDRWSTVVPR
VVELNRGSRDHIVELEPLTSRHRHKSES
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacagggcttctctgcttccacactactaaagcgctatcgtctggccatgaca
gaggcaaactcagtctcttcactgtctgggactgttgctgaggagccgtcagagggtaag
gacctttcagcagaaggggatcccaatttccccatgtctgcactttctgaacttctggac
aatgatgatggatcacagccgacccaggattcatcccaggattcagcgcgacctggacca
cagaatgataacaagcagaactcacgaataaggttcccaggggccttcaaaaaaaacccc
atggacctccttgagtctaccatgtctgagtatccagtggcacctgggcctaagaaggca
ccgatggactccctgtttgactacggcacatgtagagaggtcaacaaccagaaaaaacgc
aggaagaaacttccacgagggaaggccgaagttgagatgtcatgtgacgagggatccccg
gagccccctgttcttaaagtcttcaaccgctggctgctgtttgaagccgtatctcgagca
gatcgaagagctctggatggtctcctgcagtatcttcagtcacatgaaaagaggctgaca
gatgaggagttcaaagaaccttctacagggaagacgtgtctaccaaaagcacttctgaac
ctacacaatggtcacaacgacaccatccctgtgttggtggacattgccgaacagacagga
aacctcagagagtttatcaacacgcccttcagagatgtgtattataggggtcagacggca
ctgcatatcgccatagaacgacgatgtaaacagtatgtggagcttctggtggagaaaggg
gctgatgttcatgctcaggctaggggccgattcttccagcccagagaggagggtggatac
ttctactttggtgagcttcctctgtcactcgcagcttgtaccaaccaaccagacatggtg
cattacctgacagagaacagccacaaggcagcggatctgcggaggcaggactcaagggga
aatacagtcctgcacgccctggtccgtatcgctgacaacacccgggacaacacgcgtttt
gtcaccaagatgtacgacttgctgctcattaaatgtgccaaactctacccagactgcaac
ttggagaatgtactcaacaatgatggcatgtcccctctcatgatggccgccaagctgggc
aaaattggggtgttccagcacattatccggagagagataaaagatgaggaggttcgacat
ctttcccggaaatttaaggactgggcttatggacccgtatactccagcctgtatgatctt
tcttcactggatacctgtggagaggaagtctctgttctggagattctcgtctacaacagc
aggattgagaatcggcatgagatgttagcggttgaaccgataaacgagctgctgagagca
aagtggcagaagtttgctgctgtgaccttctacatcagtgtggtttcctaccttgtcacc
atgatcatcttcactctggttgcctattatcgcccatcagtgggtaaacccccttacagc
tacaacaccacagaagacaagctgcgcttggcaggggagatcataaccgtgctttctgga
gtctttttcttcataacaaatattaaggaccttttcctgaagaagtgcccgggggtgaat
tctttatttattgatggatcctttcaacttctctacttcatctactccgtgttggtgctg
gtgagtgcagcgctgtacctgtcagggattgaggcctacgtgtgtgtgatggtgtttgct
ttagcgctaggctggatgaacaccctctattttaccagaggccttaaacttactggaact
tacagcatcatgattcagaagattctcatcaaagatttgttccggttcctactggtctac
gtgctcttcatgatcggctatgcgtcagcattagtgtctctgctggccatctgccccgat
aacaagacatgtaatggcacctgccccaaatacccagaatgccgagatacagaacccttc
agcgaatttctcttggacctctttaagctgaccataggcattggagagctggacgacatg
ttaaaaggcgcaaaatatcccgtcgtcttcctcattctcctggtcacctacattattctc
accttcgtcctgttgctcaacatgttaattgctttgatgggggagacggtgggacaggtg
tctaaagagagcaagcagatctggaaactgcagtgggcaactactatcctggacattgag
cggtccttccctgtgtgtctgcgcaagtctttccgtgttggagagatggttactgtgggc
aagggcttggatggaacgccagacaaacgatggtgcttcagagtggacgaggtcaagtgg
tcccactggaatcaaaatctggggatcataaatgaggatccaggacagaaagacctttac
gaacaaacacagggtggacggggccttcgaagagatcgctggtccactgtcgtcccaaga
gtggtcgaactgaacaggggctccagagaccatatcgtggagttagagcctctcacaagc
cgacacagacataagtctgaaagctaa
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