Labeo rohita (rohu): 127165653
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Entry
127165653 CDS
T09007
Symbol
lamc3
Name
(RefSeq) laminin subunit gamma-3
KO
K06247
laminin, gamma 3
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04510
Focal adhesion
lroh04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127165653 (lamc3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127165653 (lamc3)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
Motif
Other DBs
NCBI-GeneID:
127165653
NCBI-ProteinID:
XP_050966443
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Position
5:complement(25276342..25363994)
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AA seq
1642 aa
AA seq
DB search
MDSSALHSLLFLLFTFFSHVLGGMDSCYDEEGVPSRCLPKFENAAFNRTVIVSNVCGIPP
EDYCMQTGSTRSCHFCDALDLELNRNATYLTDFHTDEEPTWWQSQSMFYGVQYPNSVNIT
LHLGKSFEITYVRLKFYTSRPESFAIYKRTGENGQWQPYQYYSASCRKMYGRDNKGFIRP
GENERTALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDQSPVLQDWVTATEILISLDRL
NTFGDEFFKDPKVLRSYFYAISDFSVGGRCKCNGHASDCMTNEEGRLVCACEHNTAGVDC
EHCAPFYQDRPWARATADSANQCVRCNCNGLADECVFDAEQYRSTGSGGRCVGCRKNTAG
PHCERCRENFFRSLPQQSCQNCKCNAMGSVSLQCDPEGVCMCWPGVSGVKCDICKSGFHS
LGPGGCRPCQCDNRGSVGVCSPEDGRCYCKTNVEGQSCNRCKPGSFNLQLENPEGCKKCF
CFGHSLACTSSNQYMAIDITSDFLEDPDGWKGVFSGGHEQSLIWKEGEVYLLPYREENGF
YKAPDKYLGNRLLSYGQTLSVSFTAELEELLPRSVTVMLEGSGISVTANLYSQQETYSSL
ERTPINTFTFRLTEKSVNPSIPSFEFLRMLYNLTALHISNAGGQNYTSQLSRVSLESAVL
TYYNMASHAPWVEECTCPTGFTGQFCEHCAPGFTRETPNGGPFSPCVPCNCNQHGTCHPE
TGVCDCRDFTAGRHCELCEDGYYGNALTGSPGDCLPCPCPDRTTCAQVPETGDVVCTNCP
TGQRGVRCELCDDGFYGNPLGWGGKVQPCVRCECNGNVDPNAVGVCDPMTGRCLKCLGHT
TGDHCEKCRSGYYGNALANELNPERKCKPCACNVAGTSGSPNDCHPDTGKCVCWSHVTGR
DCGQCETGYFNLQPSLGCEMCNCNPIGSSSSACHPITGQCMCRTGVEGLWCDTCRMGFFG
FSSRGCRACNCDPMGSTLMQCHDNGTCSCRSGFVGYKCDKCELNYYQNRLTHQCEECPVC
YSLIRDQASKLKAKLQELETLLSSYDCNRYSRHYRGRQQHRHQHNGLDNHIQKDQVEDYL
PNALEDLLAIQEAREAFIKQFSQLETSAQTLQLQLRSIATALNCNLTDIREVTQEEKTLK
GENECQELVDTLSAALNMQDQLQKMTLDLNSMVIPSVIPKEPNKWNVIVNESEVLVKSHT
DAAAHIEQIAEDAFKMANRTYSQLITLLEDNSTETYVQDLTEKLEEMQQLKENLTLEVNE
TLVTQLSLQRHNSEIATILENITASLSELRKTDGNFTLAAQESNITSFSQMLNQTNVTAT
QEPEITESKNLMNRTTELDGSVQSKEHLINETREKIQPHVDSAEKHLKTAQELKQLTAVA
EGFKVSAVSSVVTGKEVEAEILSLQKGLEDVEQDWPQLPTYSKGYLKREKMLKEKTLVDV
KKRVKQTERMIKPAVENATAASSTAKQAEESANAVAKNAKVSFTQGKRTKHASGQLRSAV
DATLEQLTELESQAAQKQETIEAEEGIQLSSRSVIDNMETAKSQLESFTNTLSLLLKQLD
ANVVLENYDRILNETAARLRVLQGAVESPSLTGKIQRLHNAAHDQEKQLQNLEQSLQEIR
EERDSLTDIAQNLPKTCPQKGH
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atggattcctctgcacttcactctcttttatttctgcttttcaccttcttctcccatgtt
cttggtggaatggactcctgttacgatgaggagggcgtcccgagccgctgtttgcctaaa
tttgaaaacgcggccttcaatcgtacagtgatcgtttcgaatgtgtgcggtatcccacct
gaggactattgcatgcagacggggtccacgcggtcgtgtcacttctgtgatgccttggac
ttggaactgaatcgcaacgccacttacctgacggacttccacacggatgaagagcccacc
tggtggcagagccagtccatgttctatggagttcagtatcctaattcagtcaacatcaca
ctgcatcttggcaagtcctttgagatcacatatgtgcgtctgaagttctacaccagccga
ccagagagcttcgccatctacaagcgaaccggggagaatggacaatggcagccgtatcaa
tattacagcgcttcctgtcggaagatgtacgggagggacaataagggcttcatacgtcca
ggtgagaatgaaaggacggcactctgcacggatgaatttagtgacatctcaccactaact
ggcggaaatgtggccttctccacactggagggacgacccagtgcctacaacttcgaccag
agtcctgtgttacaggactgggtcacagctactgaaatcctcatttctctggacagactg
aacacttttggagatgagttcttcaaagatcccaaagtgcttcgttcatatttttatgcc
atatctgatttctccgtagggggcaggtgcaagtgtaatggccatgccagtgattgcatg
accaatgaggagggacgtttggtgtgtgcttgtgagcacaacactgcaggggtcgactgt
gagcactgtgcccccttttatcaggaccggccgtgggcacgggccactgccgattcagcc
aatcagtgtgtgaggtgtaactgcaatggtcttgctgatgagtgtgtgtttgatgcagag
cagtaccgcagcacaggaagtggggggcgctgtgttggctgcaggaaaaacacagctggc
cctcactgtgagagatgcagagaaaacttctttagatcgttaccacagcaatcctgccaa
aactgcaagtgtaatgcaatgggctctgtgagtttgcagtgtgatccagagggagtgtgt
atgtgctggccaggtgtgtctggtgtgaagtgtgacatttgcaagtccggttttcattct
ctcggtcctggcggatgcaggccgtgtcagtgtgacaacaggggcagtgtaggagtatgt
tcacctgaagacggacgctgctattgcaagactaatgtggagggtcagtcctgcaacagg
tgtaaaccaggctctttcaaccttcagctggaaaacccagaggggtgtaaaaaatgcttt
tgctttggacattccctcgcctgtacgtcctccaatcagtacatggcaattgatattact
tcagacttcctagaagatccagatggctggaagggtgtgttctccggagggcacgaacaa
tccctcatctggaaggagggagaagtctatctgttgccctacagagaagagaatggcttc
tacaaagcacctgataaatatctggggaacaggttgctaagttacggacagacccttagc
gtgtcgtttacagctgagctggaggaactcttgcccagaagtgtgaccgtgatgctagag
ggttcgggaatatcggttactgctaatttgtactctcaacaggagacttactcctcattg
gagaggacgcccatcaacactttcactttcaggttaacagagaagagcgtaaatccatct
attccctcatttgagtttctccgaatgctttacaatctaactgcactacatatcagcaac
gccggtggccagaactacacctctcagctctccagggtaagccttgaatctgcagtcctg
acatactacaatatggcttcacatgctccgtgggtggaggagtgtacttgtcccacagga
ttcactgggcagttctgtgaacactgtgctcctggattcaccagggaaacccctaatggt
ggacccttctccccttgtgtgccttgcaactgcaatcaacatgggacctgccatcctgag
acaggtgtgtgtgactgcagagacttcaccgcaggccgtcattgtgagctttgtgaagat
ggttactatggcaatgcactgactggcagcccaggcgactgcttaccttgtccttgtcca
gatcgcaccacctgcgcccaggtgccagagacgggggacgtggtttgtaccaactgtccg
acaggccaaaggggtgtacggtgtgagttatgtgatgatggtttctatggcaaccctctg
ggctggggaggcaaagtgcaaccgtgtgtgaggtgcgagtgtaatgggaacgtggatcct
aatgcggtgggtgtgtgcgatcccatgactggacgctgtctgaaatgcctgggacatacg
actggggaccattgtgaaaaatgcagatcgggttactacggcaacgctctggccaatgaa
cttaatccagagcgaaagtgcaaaccttgtgcctgtaacgtggctgggacgtccgggtcg
ccgaatgactgccacccggatacaggaaaatgtgtttgctggagtcatgtgacaggaaga
gactgtggacagtgcgaaactggctactttaatctgcagccaagcttgggctgtgagatg
tgtaactgcaatcccattggctcctcctcatcagcatgtcatccaatcacaggacaatgc
atgtgtcgaacaggtgtagaggggctgtggtgtgacacttgtcgaatgggattttttggt
ttctcctctagaggctgcagagcatgtaattgcgatcccatgggctcgaccttgatgcag
tgccatgacaacgggacatgttcttgtcgcagtgggtttgttggttataagtgtgacaag
tgtgagctgaactactaccagaaccggctgacccaccaatgtgaggagtgccctgtgtgc
tacagtctcatcagggaccaggccagtaaactgaaagccaaactgcaggagttggagacg
ctgctcagcagctatgactgcaatagatacagtcggcattatcgtgggcgccagcagcac
agacaccaacataacggcctggacaatcacatacagaaggatcaggttgaagactatctg
cccaatgctctggaggacctcctagctattcaagaggctcgagaggccttcattaaacag
ttctcacagctggaaacatctgcccagaccttacagctgcagctgcgtagcattgcaacg
gcgctgaactgcaacttaacagacatcagagaagttacacaggaggaaaagactctgaag
ggtgaaaatgagtgtcaagaacttgttgacactttatccgctgctctgaatatgcaggac
cagcttcagaagatgactcttgaccttaacagcatggtcatcccatctgtaatccctaaa
gaaccaaacaaatggaacgtcatagtgaatgaatctgaggtgctggtgaaaagtcacaca
gacgcggcagctcatatagagcagatagcagaagatgcctttaaaatggctaacagaacc
tattcacagctgataacgttgttagaagacaactccacagagacttatgtacaggatctc
acagagaagctggaggagatgcagcagctgaaggagaatctgacacttgaggttaatgag
actttagtgacacaactgtcacttcagaggcacaactcagagatagccaccattttagag
aacatcaccgcttcgctatctgaactacgtaaaacggatggcaatttcacccttgcagcg
caggagtccaatataacgtctttctcacagatgcttaatcaaacaaatgtcacagcaacc
caggagcctgaaatcacagagagcaagaacctgatgaacaggacaactgagttggacggt
tctgtccagtccaaagagcacttgataaatgagaccagagagaaaatacagcctcatgtg
gacagtgctgaaaaacacctgaaaactgctcaagagctcaagcagttgacggctgtggct
gagggatttaaggtgtcagccgtctcctctgtggtgacagggaaagaggttgaggcggag
atcctgtctctacagaagggtctggaagacgtggagcaggactggcctcagctgcccaca
tacagcaaaggatatctgaagagagagaagatgctgaaagaaaagacactggtggatgtg
aaaaaaagagttaagcagacagaaagaatgatcaagcccgcagtggagaatgcgacggct
gcgagtagcacagctaaacaagctgaggagtctgcaaatgctgtagctaaaaatgccaag
gtgtccttcacgcagggaaaacgtacaaaacacgcatctggacagttgcgttcagctgtg
gacgccaccctggagcaattgactgagttggaaagccaagctgcacagaagcaggaaacc
atagaggcagaggagggcatccagctttcttcaaggagtgtgatagacaacatggagaca
gccaagagtcagctggagtccttcacaaacacgctatctctgctccttaaacaactggat
gctaatgtggtgctggagaactacgatcgcatcctgaatgagacggcagcccgtcttcgc
gttctccagggtgctgtggagagtccgtctctcaccggaaagattcagaggctccacaat
gctgcgcacgatcaagagaaacagctgcaaaatcttgaacagagcctgcaggagataaga
gaagaaagagacagtctgacagacatcgcccaaaacttgcctaaaacatgcccacaaaaa
gggcactga
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