Labeo rohita (rohu): 127165660
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Entry
127165660 CDS
T09007
Symbol
kntc1
Name
(RefSeq) kinetochore-associated protein 1 isoform X1
KO
K11577
kinetochore-associated protein 1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127165660 (kntc1)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
RZZ complex
127165660 (kntc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rod_C
KNTC1_N
ARM_KNTC1_3rd
ARM_KNTC1_1st
ARM_KNTC1_2nd
Rod_N
TPR_14
GT87
BACK
Motif
Other DBs
NCBI-GeneID:
127165660
NCBI-ProteinID:
XP_050966456
LinkDB
All DBs
Position
5:complement(132906..210273)
Genome browser
AA seq
2231 aa
AA seq
DB search
MWNNVELLLNEDTNTVRLSGDAEQESGNALYQVDTLVKLSSSEKVLSNPRVSASSTPSCC
VVVADTAVVLFDPGFQTVLIHLYFDTVVDAVTACPQGQFLLVGERNGSLHIIYVPLKKTV
LTKTLHKRNPSDGDEATFKSLILHETPGAKGVYDLFFIVNDGFLHTSNVALGKIQRAIEN
MDLAALNQIQDDILMNFCSTKEIHEDGCNSAGLVCFGSTVHLLIGAVGANVLSLWTMGSG
QKSLSLAKLLDSALVSEVKKIQVVDNLVYVLNKEGMLSLLDIHSFVMLCCWPDQYVVDFL
LISDGNSSSITQPDENNMKILSLVAEENKGHARKLVFQSLPSMEVFYSLEVSSESWLIQK
GISMDTIYLLEGILANAKSSPEDPVSTVVIRCFTEALPENRLNRLLYKHKFEEAEKFAKA
FGLDVELVYKVKLNVVLEKLISASGADQTLEWPELIEEAKSNLMKIMDEQFVVQYCLTAS
WPTLSIAEEMLNYTLNRFPCCQVQTALAKLATFSNVYGPDNFEGIAWIEFLNSTDYLKDI
LALLKEGNLTGAQYLWLRHEGEFASEFDESCLHALLGSISSDVPSQELSVWFKGVVVPFV
WRVLPTGQKILARWLEQRARNLELTEKSDWPHNGLVLAELGLPSLWRSMGLAENCGSEEV
QNLRSLVANLRQLCDLYSKYSCHLSLSDYERGSTRSMAFLMLDKVQAPELIPAVIKSSIQ
PYALENGLDLDQTLLQYIKDLLDCCSSQITSLFTEWEAKAVAVLHCMTDANKVMDAVIEI
MYKAVVPWSDTIEKLVQQHLEKEHPKQELLREGYRLMEIKKLLRCYGIRSLALSNTRDIM
MLVRHILKQDLPSSLEDSLKLIEAYKLNPAEIHHLHCIHLIQHNKREKCVGLLKNLPHSE
AEFVIERLVCWARLELQDKQHISEEQKKLQMLISQIMVEALKYLQSIQTDDAFKKTESEN
NLMMFTAIAHLQEDFDIFLTPEEYEDPVVRRKFNQQLITAYENARAWRRSGKQHPDEVSG
AQLNGGAAVANDPDGKTKTLSTEAGLHRLARQLQKTEQELWADLALRALDAGDVEKALQI
LRELYQHHSNCSTGQVLFSTAQRLCQMLEENVPMVLPEKMNLPAVIHGLACQAITVCHSD
LLLDCLELCKSTRSAADVYRQCQIEDFGFFAKESALSGEEDAYTESHFQDVFNEDCIVLD
PVSVLPLQYKITRNLLPLSESRLYPFDCSCLSYCALRADADLVGPLLNPLASMLQMLQEC
SQLELALRLLKESYGSILTHFVSNNMDLSLSVRLHSNNRMVRDKQTLDRIEKTVLSSVGV
VVVSLLQKVLNWRVVDSDLAIGLCTILPKAAVVDILWKMITSAWQNYEKIKVVAMVGAHL
SFLYKDEEERAKFLSVITDAEWGIQLGKLGVSIQSVFRQCPETKRNLIPTLVKNKNITPD
IILHYCSTFGLDSGSAINLYITTLLLQEDRWYETEIGEGDADAPMRCEESLLGEDDMLES
ALQIVPQLGSTKDLVISLNTALTKLNPYNYERIERVLRTIQMADETTTLLPLGQMVGLLQ
HLKSHRRISPPTDLESSYVLENGLEPSALANTRLPFHLLFQTNHTFWKIVSPELSEDTLP
TLLLICKLMKVNPDKLYVLAVNHVFKKTLLPLLTDQSKKIQNVPASKELSSVAQSIFKHA
LCIQNLELAAATVHKIAQDLPAGAQKTDFLKFSLELVHKLLQSDTLEESLQARGEALISK
LQLQYQRSATENALLSSQLSSPELLKLTGLPGRLIVALFEHGSVLDRMKNPAGLTYPDIH
SVAKDIASINGVDLLKIRNILLEKWLCQSGQSNGKDNHQDYVTDINDDPDLMRVVYLLQM
HPMDISARLLSPILTAQTWPLGGSGLRLTFEHRSRALLCLTHLADAATLETLSNQPSSKI
RYYLKCYMYLAQMEALNIPYTLEMFISSPKEGMIKGLWKNHNNEPQAVRLVAELCLEYEV
YDLQLWNSVLQKLMSFNMTSYLQKVLEALIAVPSLLEGPSLSRIWRSVIQAPFLTASVPL
SPQQHNVMYKTFVLLLKCPFLFTLDLVAIAKRFSQFGLQAFSLGSLLLVPCAKKKEPQIQ
SFLLSCNPTLILDQVEESMSTGELAGIPSQIRDTVFTFLCRNGKSRMLMKTKHFTYLKRH
LISKGHSEMVQELLNCFVEQNGEEEAISFAHEYLKYRELKGQTAPLSNTFSDPVRDFLEK
ALEPRGAQTSA
NT seq
6696 nt
NT seq
+upstream
nt +downstream
nt
atgtggaataacgtcgaacttcttctgaacgaggacacgaacacagtccgtctgtccgga
gatgctgaacaagagtctggaaacgcgctgtatcaagtggacaccttggtgaaactctca
tcctccgaaaaggtgctgtccaatccgagggtgtctgcctccagtactcccagctgctgt
gtggttgtggctgacactgctgtggttctctttgatcctggttttcagactgttctgatt
cacttgtatttcgacactgtagtagatgcagttaccgcttgcccccaagggcagtttctt
ctggtcggagagagaaatggaagtctgcacatcatctatgtccctctgaaaaagacagtg
ctgaccaaaactctgcacaaacgaaacccctctgatggcgacgaggcgacctttaagagc
ctgatactgcacgagacgcccggggctaaaggagtgtatgatctcttttttattgttaat
gatggtttcctccacacatctaatgtggccttgggaaaaatccagagagcgattgaaaac
atggatctggcggccttaaatcagatccaagatgacattcttatgaacttctgctcaact
aaggagattcatgaagatggttgcaactcggcaggtctggtctgtttcggaagcacagtc
caccttctgatcggggctgtcggtgccaatgttctttcactttggaccatgggctccggg
cagaaatctttgtctctcgcaaaactcctcgactctgctttagtgtcagaggtgaagaag
attcaggttgtggataatttggtgtatgtcctaaacaaagagggcatgctcagcttgttg
gacattcactcatttgtcatgctgtgctgctggccggatcaatacgttgttgatttcctg
ctgatttcagacggaaactcctcgtctattacacagccagatgaaaacaacatgaaaatc
ttgtccttggtagctgaagaaaacaagggtcatgctaggaagcttgtgtttcagtcgctg
ccttctatggaggttttctactcgctggaagtgtcttctgagtcttggttgatccagaag
gggatcagtatggacacgatctatctgctggaggggattttggcaaacgcaaagagcagc
cctgaagatccagtgtctactgttgtcattagatgcttcaccgaggcgctgccagagaac
agactcaacagacttctgtataagcacaagtttgaagaagcagagaaatttgccaaagcc
tttggacttgatgttgaactggtgtataaggttaagctgaatgttgtgctggaaaagctc
atctccgcgtcgggcgctgatcaaacccttgagtggcctgagctcattgaagaggccaaa
agcaacctgatgaagatcatggacgagcagtttgtggtgcagtactgcctgactgcgtcc
tggcctactctcagcatagccgaagagatgttaaattacaccttgaaccgtttcccctgc
tgtcaggtccaaacggccctggcaaagctcgccaccttcagcaacgtgtacggacccgac
aactttgagggcatagcgtggatcgagttcttgaacagtacagattatctcaaagacatc
cttgctcttctgaaggaggggaatcttactggagcgcaatacttgtggcttcgacatgag
ggtgagtttgccagtgaattcgatgagagctgcctgcatgctttgctgggctccatttca
tctgacgtcccgtcacaggagctgagtgtgtggtttaagggtgttgtggtcccgtttgta
tggagagtgttgcccacaggacagaaaatcctggccaggtggttggagcaacgcgcaagg
aatctggagttaacggagaagagtgactggcctcataatggactggttctggctgaactt
ggcttgccttccctctggaggtccatgggtttggctgaaaactgtggatcagaggaagtg
caaaacctgaggtcactggtggcaaacctcagacagctttgtgacctctactccaaatac
agctgccatctgtcactgtccgactatgaaagaggaagcacacgcagtatggcctttctg
atgctggataaggtgcaggcgccggagctgattcctgccgtcattaagagcagcatccaa
ccctacgctctggagaacggattggacctggaccagacactcttacagtacatcaaggac
ttgctggactgctgcagttctcagatcacgtctctcttcactgaatgggaggccaaagct
gtggctgtactacactgcatgacagacgcaaacaaggtgatggacgctgtgattgagatc
atgtataaggccgtggtgccgtggagtgacaccatcgagaagctcgttcagcagcacctg
gaaaaggaacatccaaaacaggagttgctgagagagggttacagattgatggaaataaag
aagctcctccgatgctacggcatccgcagcttagccctttctaacactcgtgacatcatg
atgcttgtgaggcacatcctgaaacaggacctgcccagctctctcgaggactcgctgaag
ttaattgaggcctacaaactaaacccagcagagatccaccatctgcactgcatccatctc
atacagcataataagagggagaagtgcgttggactgctgaagaatctgccccattctgag
gccgaatttgtgatcgagcgattggtctgttgggcgagacttgaacttcaagacaagcaa
cacatttctgaagagcagaagaaattacaaatgctaatatcgcagattatggttgaagcg
ttgaagtacctgcagagtattcagacggatgatgccttcaagaaaactgaaagtgaaaac
aatctgatgatgttcacagccattgctcatctacaggaagactttgacatcttcttgacc
ccagaggagtatgaggatcccgtagtgagacgcaagttcaaccagcagctcatcaccgcg
tacgagaacgcgcgagcgtggcggcgctcgggaaaacaacaccccgacgaggtctccggc
gctcagctgaacggcggcgccgcggtagccaatgatccggatggcaaaacgaagacgctc
tctaccgaagctgggctccaccggctggcccgacagctgcagaagacggagcaggagctc
tgggcggatctggcgctgagagctctggacgccggggacgtggagaaagccttacagatc
ctcagagagctgtaccagcaccactccaactgcagcacaggacaggttctgttcagcacg
gcccagcgcctctgtcagatgctggaggaaaatgtccccatggttctgcctgaaaaaatg
aaccttcctgccgtcatccatgggctggcctgtcaagccattacagtctgccacagtgac
cttctgctggactgtttggagctgtgtaaaagcaccagaagtgctgcagatgtgtacaga
caatgtcagattgaagattttggattttttgctaaggaatctgcactgagtggtgaagag
gacgcgtacacagagtctcattttcaagatgtcttcaatgaggactgcattgtgctggat
ccggtctcagtgcttccactccagtataaaatcaccagaaatctgttgccgctgtcagaa
tcgaggctttatccttttgactgttcctgtctgtcatactgtgctctcagagcagatgcc
gatttggtcgggcctttgctcaatcccttggcctcgatgctgcagatgctgcaggagtgt
agtcagctggaactggctctgcggcttctgaaggaatcttacggcagcatattaacacac
tttgtttccaacaacatggatctctctctgagcgtgcggcttcattctaacaaccgcatg
gtccgagacaaacagactctcgacaggatcgagaaaaccgttctctcgtctgtcggcgtg
gtcgtggtctccttgttacagaaggtgctcaactggagagtggtcgactctgatctggcc
atcgggctttgtaccattttgcccaaggcagcggttgtggatatcctgtggaagatgatc
accagtgcctggcaaaattatgagaagattaaggttgttgccatggtaggagcccatctc
agttttttgtataaggatgaagaggagagggcgaagtttctgtctgtcatcactgatgcg
gagtggggcattcagcttggaaaactcggggtttccatccagtcagtgttcaggcagtgt
ccagagacaaagagaaacttgattcctacactcgtgaagaacaagaacatcactcctgac
atcatactgcattactgcagcacatttggattggacagcggttctgcaatcaacctgtac
atcaccactctactgctgcaggaggatcgctggtacgaaacggagatcggagaaggtgat
gccgacgctcccatgcgctgtgaagagtcactgctaggagaagatgacatgctggaaagt
gcccttcagatcgttcctcagctcggctccaccaaagaccttgtgatcagtctcaacacg
gccctgaccaagctgaacccgtacaactacgagcggatcgagcgagtgctcagaactatt
cagatggccgatgagaccacaacccttctgcccctcggtcagatggtgggattgctccag
cacttgaagtcacacagaaggatctctccccccactgatctggagagctcgtatgttttg
gagaacggtcttgagcccagcgctctggccaacacccgtctgccctttcacctgctcttc
cagaccaaccacaccttctggaagattgtctctccagaactgagtgaggacactttaccc
acgctgctcctcatctgtaaattaatgaaggttaatcctgataagctgtatgttttggct
gtgaaccatgtgttcaagaagactctcttgcctttgctgacggatcagtcaaagaaaatc
cagaacgttcctgccagtaaagagttgtccagcgtggctcagagcatctttaaacacgcg
ctgtgcattcagaatctggaacttgctgcagccacggtccataaaattgcccaggacctt
cctgcaggtgcacaaaagacagatttcttgaagttcagtttggagctcgtacacaagtta
ctgcagtctgatactctggaggagagtttacaggctcgcggtgaagcgctcatctccaaa
ctgcagttgcagtatcagcgctcggccacggagaacgcgctgctttcgtctcagctcagc
tcgccggagctcctcaagctcacgggactgccgggtcgcctcatcgtggctctctttgag
cacggctcggtgctggaccgcatgaaaaaccctgccggcctgacttaccctgacattcac
agcgtggccaaagatattgcctccatcaatggtgtggatcttttgaaaatccggaacatt
cttctggagaagtggttgtgccaatcagggcagtcgaacggcaaggacaatcatcaggac
tatgtgactgatataaacgatgatcctgatctcatgagagttgtttacttgctgcagatg
caccctatggatatcagcgctcgcttgctcagtcccatcctcacagcacagacatggccg
ctgggaggatcaggccttcgtttgacctttgagcaccgcagtcgagctctgctgtgtctc
actcatttagcagacgctgccacactggagactctttccaaccagcctagcagcaagatc
agatattatttgaagtgctacatgtacctcgcccagatggaggccctgaacatcccctat
accttggaaatgttcatcagcagccctaaggaaggcatgatcaaaggcttatggaagaac
cacaacaatgaacctcaggctgtccggcttgtggcagagctttgtttggagtatgaggtt
tatgatttgcagctgtggaacagcgtcttgcaaaaactcatgtcgttcaatatgacgagc
tacttgcagaaggttctcgaagccctcatagcagtgcccagccttttagaggggccaagt
ctttccaggatatggcggagtgtgattcaagcccctttcttgacagcttctgttcctctc
agccctcaacagcacaatgtcatgtacaagacatttgtgctgcttctgaaatgtccattt
ttattcactctggatctggtcgccatcgccaagcggttctctcagttcggtctgcaggcc
ttctctctgggctcgctcttgctcgtaccttgtgccaaaaagaaggaaccacagatacaa
agcttcctgttatcgtgtaacccgaccctcattctggatcaggtggaagagagcatgagc
accggagagctggccggcattccttcacagattagagacacggtgttcaccttcctttgt
cgaaacggcaagtcccggatgttgatgaagaccaaacacttcacttatttgaagaggcac
ttgatctcgaagggtcactctgaaatggtgcaggagctgctgaactgcttcgtggagcaa
aacggtgaggaggaggccatttcttttgcccatgaatatctgaaatacagagaactgaag
ggacagacagcacctctgagcaacactttctctgatcctgtcagggattttttggaaaag
gccctggaacccaggggtgcacaaacatcagcgtaa
DBGET
integrated database retrieval system
