Labeo rohita (rohu): 127165661
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Entry
127165661 CDS
T09007
Symbol
clip1a
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
127165661 (clip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127165661 (clip1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lroh04812
]
127165661 (clip1a)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
127165661 (clip1a)
Cytoskeleton proteins [BR:
lroh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
127165661 (clip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
127165661
NCBI-ProteinID:
XP_050966458
LinkDB
All DBs
Position
5:complement(1285252..1325620)
Genome browser
AA seq
1571 aa
AA seq
DB search
MSTSKPSGLKAPSKIGRPTNAGVTKTSPSAGAAKPAQSDKSSAEAQDAGEQFKIGDRVWV
NGNKPGVVQFLGETQFAPGQWAGIVLDEPIGKNDGSVSGVRYFQCEALKGIFTRPSKLSR
TEGEADGTATAPPSRASSPTPSTTSVSASTKKPASPTKTTAAPASELVRSKSESVSNLSE
SGSVKKGERELKINDRVLVAGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTR
YFQCQPKYGLFAPVHKVTRIGFPSTTPAKAKTTVRKTTTTTTTPSGLKRSPSASSISSMS
SVASSASCKPSRTGLLTETSTRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAK
ATSHVGEVEQELTLLREGQEQYVLEVDAKMDQLRALVEAADREKVELLNQLEEEKRKVED
LQFRVEEACITKGDLETQTQLEHALLKELEQSLLFEKTKADKLQRELEDSRVATVSEKSR
ILELERDLSLRDKEVAALRKSLEAVPGQDGVPDSSVLVLQEELSSLRAQLAAQSHSHQTE
LSSLREMLAAREKEHGESLSQLQSSSGRLSKDNEQLLAQLAKSKEENSNVVEEWRAKLAS
VEASHQQALEELKSSHEASRSELVEVSKALEQLQLTHKLQLEGLANKHASEAMGWTGEAK
EHKAQLLKASEENERLVETLRTNLEKAEEQHLVEMEEVLGKLHSAELRVKELEDTGVKIG
QQLQERAQEALEQKTALQTLQSQHSQGNQEMERLLTQIEEAKSQARSQEEKVTELNSVLE
VKQQELNGLLQEKSSLVQEVSVLKQNLEKTSNDQAKSAQTNQELREELKNKEEQSTSLSA
ELQDMKSQIAGLRRSLKANEERIQLLTKDKTKLENDIMDMTKSSGDSSTLITKLNEDVKL
KERRLEELQKQLEEEREKAAQAEEKHSQAQVQAEKEAKSLEQKHKAELSDLQEKIKLLET
SAEDNQAKAKDMLAVGEKALADAVERHSKEMQELQGKFDKVQQELRASQDESLELKKKID
ELKTFKEKAVVSETAEQAAQASLERLTHDNQQLQKDKTEAETLVTQLKNSVQEMQSKLDA
LKQQNSQHEESLSSDSQKISSLTKDIEELKQAAAEKEQAVEALKKEKEKLTVELASSHKD
SNILLNLKKECDNLNDQLKEVKSRESALKTESEKEKAALQQSLQTQSALITEKDKELDSL
RNELGTLKQQNSQYEENLSSDSQKISSLTKDIEELKQAAAEKEQAVEALKKEKEKLTVEL
ASSHKDSNILLNLKKECDNLNDQLKEMKTRESTLTSESEKEKAALQQSLQTQSALISEKD
KELDSLRNEFKKECDSLNSQLKKIKMRESTLTKETEKEKEALQQSLQTQSALISEKDKEL
DSLRKELAGLRDSTQTLQSNLKSHRSENTVLQERVKNLERSLADAQITSAGDDDSDDSAL
KTWKEAKENAERQVEFLNSVIVDLQRKNEDLKSKLEKMAEAALNGNGAAETDTHNSHAEP
AIKKKPPPRLFCDICDCFDLHDTEDCPTQDQMLDSPPHTTYHGSPNDERPYCDICEVFGH
WTESCNDDQTF
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatcaaaacccagtggactcaaagcgcccagcaaaattggcagaccaaccaat
gctggggtcacgaagacgtctccttctgccggtgctgctaaaccagctcagagtgacaaa
tcctcagccgaagcccaagatgcaggagagcagttcaagatcggggatcgcgtctgggtc
aacggaaacaagccgggcgtcgttcagtttttaggagagacccagtttgctccgggccag
tgggctggaattgtgctcgacgagccaatcgggaaaaatgacggttcggtgtcgggcgtg
cgctactttcagtgcgaagccttgaagggtattttcacaaggccctccaagctttcgcgc
acagaaggtgaggcggacggcacggcgacggctcctccgtcccgcgcttcgtcgcccacc
ccgtccactacgtcggtgtctgcttcaaccaagaaaccagcttcacccactaaaaccacc
gctgctccagcctcagaactggtgcggtcgaagagcgaatccgtgtccaacctgtcggag
agcggctcggtcaagaagggagaacgggagctgaagatcaacgatcgagtgctggttgct
ggcacgaaagctggtgtggtgcgtttcttgggcgaaacagattttgccaagggtgagtgg
tgtggagttgagctggacgagcccttggggaagaacgatggtgctgtggctggaaccagg
tatttccagtgtcagcccaagtacggtctgttcgcaccagtgcacaaggtgacccgtatc
ggctttccctccacgaccccagccaaggcgaagaccaccgtgcggaagacgacgacgacc
accaccaccccgtcaggactgaagcgcagccccagcgcctcctccatcagctccatgagc
tccgtggcctcgtcagcgagttgcaagcccagccgaacaggactgctgacagagacgtct
acgaggtatgcgaggaagatctcgggcacgacggcgcttcaggaggccctgaaggagaaa
cagcagcacatcgagcagctcctcgccgagcgcgacctggagagagccgaggttgccaag
gcgaccagccatgtgggcgaagtggagcaggagctcacgttactgagagaaggccaggag
cagtatgtgctggaggtcgatgccaagatggatcagctgcgagcgctcgtggaggctgcg
gaccgagagaaggtggaactgctcaaccagctggaggaggagaagaggaaggtggaagac
ctgcagtttcgggtggaggaagcctgcattaccaaaggagatctggagacgcagacgcag
ctggagcatgcccttcttaaggagcttgaacagagtcttctctttgaaaagaccaaagct
gacaaactgcagagggagttagaagactctagggtggccacggtctctgagaagtcccgt
atcctggagctggagcgggatctctcgttgcgggacaaggaggtagctgctcttcgtaaa
tcgttggaagctgtcccagggcaggatggggttcctgactcctccgtattagttctccag
gaggagctgagctccctccgcgcacagctggccgctcagagtcacagtcaccagacagag
ctgtcttccctgcgcgagatgctcgcggctcgagaaaaagaacacggcgagtctctgtcg
cagctccagtcatcctcaggtcgcttgtcaaaggataacgagcagcttttagctcagctg
gccaaatctaaggaggagaattcaaatgtcgttgaggagtggcgcgctaaactagcatcg
gtcgaggcctcgcaccagcaagctttggaggagctcaaatcctcccacgaggcaagcaga
tctgagctggtggaggtgagcaaggctctagaacagttgcaactgacacacaaactgcag
ctcgaggggctcgccaacaaacatgcttctgaagccatgggctggacgggtgaagccaaa
gagcacaaggcgcagctcctgaaagccagcgaagagaacgaacggctggtggaaacgctg
cgcaccaatctggagaaggcagaggagcagcacctggtggaaatggaggaggtgctggga
aaacttcacagtgctgagctcagggtgaaggagctggaggacacgggagttaagataggg
cagcagctgcaagaaagggcacaagaggccctggagcaaaaaacagcccttcagactctg
cagtcgcagcacagtcaagggaaccaagagatggagaggttactgacccaaatcgaggag
gcgaagagccaagccagatctcaggaagaaaaggtcactgagttgaattcagtactagag
gttaaacagcaagagctcaatggcctgttgcaggaaaagagctctctggtgcaagaagtt
agtgtgctgaaacagaatcttgaaaaaacatctaatgatcaagccaaatccgctcagact
aatcaagagctgcgcgaggagctcaagaataaagaagaacagagcacatctctttctgct
gaactacaggatatgaagagccagattgccggtttacggagaagtttgaaagcaaacgaa
gaaaggatacagctgctgaccaaagacaagactaaacttgagaatgacatcatggacatg
acgaaatcgtcgggagacagttctactctaataacaaagctgaatgaggatgtcaagctg
aaagagaggagactagaggagcttcagaagcagctggaggaggagagggagaaagcagct
caggctgaggagaaacactctcaagcacaagtccaggctgagaaagaagccaaaagcctt
gagcagaaacacaaagcagagctttcagacctgcaggagaagatcaagcttctggagacg
agcgctgaagacaatcaggctaaagccaaagacatgcttgctgtgggagagaaagctctg
gccgatgctgtggagcgtcactcaaaagagatgcaggaattacaaggcaagtttgataaa
gtgcagcaggagctccgtgcgtctcaggatgaaagcctggagctgaagaaaaagattgac
gagctgaagaccttcaaagaaaaggctgtggtgtcagagacagcagagcaggctgcacag
gcctcgctggagagactgacccacgacaaccaacagctgcagaaagacaagactgaggct
gagactctggtgacacagctcaagaactcagtgcaggaaatgcagagcaagctggatgct
ttgaaacagcagaactcgcagcatgaagagagtctgagctctgacagccagaagatcagc
agcctcaccaaagacattgaggagttgaaacaagcagccgctgaaaaagagcaggcagtg
gaggctctgaaaaaagagaaggagaagctgacggtggagctcgccagcagccacaaagac
agcaacatcctgctgaatctcaagaaggagtgtgacaatctcaatgatcagttgaaggag
gtgaaatcgagggaaagcgctttgaaaactgaatcagagaaggagaaagcagctctccag
cagtccctacaaacacagagtgccttgataacagaaaaggacaaagaattagactctctg
cgaaatgagctgggcactttgaaacagcagaactcgcagtatgaggagaatctgagctct
gacagtcagaagatcagcagcctcaccaaagacattgaggagttgaaacaagcagccgct
gaaaaagagcaggcagtggaggctctgaaaaaagagaaggagaagctgacggtggagctc
gccagcagccacaaagacagcaacatcctgctgaatctgaaaaaggagtgtgacaacctc
aatgatcagttgaaggagatgaaaacaagggaaagcactttaaccagcgaatcagagaaa
gagaaagcagcacttcagcagtctctacaaacacagagtgccttgatctcagaaaaggac
aaagaattagactctctgagaaatgagttcaaaaaggagtgtgacagcctcaatagtcaa
ctgaagaagataaaaatgagggaaagcactttaacaaaagaaacggagaaggagaaggaa
gcactacagcaatctcttcaaacacagagtgccttgatctcagaaaaggacaaagaatta
gactctctgagaaaggagctagcaggtctgcgtgattcgacacagacgctgcagtccaat
ctgaaatcccacaggagtgagaacacggtgctgcaggagcgagtgaagaatctggagagg
agtttagctgacgctcagatcaccagcgcaggagacgacgactcggatgattctgcttta
aaaacatggaaggaggcaaaggagaatgctgagcgacaggttgaattcctgaactcggtt
attgtggatctgcagcggaagaacgaagacctaaaatctaaactggagaagatggctgaa
gcagcgctcaatgggaacggcgcagctgaaacagacactcataacagtcacgcggagcca
gcgatcaaaaagaaaccccctccccgtctcttctgtgacatctgcgactgctttgacctg
cacgacaccgaggactgtcccacccaggaccagatgctggattcgccgccacacaccacc
taccacggcagtcccaacgacgaaaggccgtactgtgacatctgtgaggtgttcggccac
tggaccgagtcctgcaacgacgatcagactttctag
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integrated database retrieval system
