Labeo rohita (rohu): 127165688
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Entry
127165688 CDS
T09007
Symbol
ube3b
Name
(RefSeq) ubiquitin-protein ligase E3B
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127165688 (ube3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127165688 (ube3b)
Enzymes [BR:
lroh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
127165688 (ube3b)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
HECT type E3
127165688 (ube3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
127165688
NCBI-ProteinID:
XP_050966500
LinkDB
All DBs
Position
5:complement(35589874..35607676)
Genome browser
AA seq
1069 aa
AA seq
DB search
MFTATQTSKSQFLDKARVAREERKGHKEKERAATQIQALVRKFLCRCRLQREIRKEVDDF
IAVSDAGSTKRNALSIFKIARKLLFILSKDDKLRFEKLCRIILSSMDVENEPKVWYVSLA
LSKDLTIPWLKQIKDVLWVSCEFLKKLKPDILQDNKLVTLYLTMLITFTDTSTWKIIRGK
GEALKPALNRICENIMGHLNQKGFYSVLQILLTNGLARSRPSLSKGTLTAIFTLSLRPVI
AAHFSDNLLRSFLLHIMSVPAFISHLNTLTPDCMVTMQTHDLFRKFVLFLSREEQCLDIC
VCLEGSHTLCLLGNLIQLGYFNVKVLEQEAGHFVKDLTDMLSYCQRYVSQKKSNLTHWHP
VLGWFSQTVDYGLNESMPLVTKQLQCLWGVPVICTLFCDVLSKKLETQDATSLPPPPPSS
LQNNLPVKNLFKRAFQKSASVRNILKPVGGKRVDSAEVQKVCSICVLYQTALTTLTQIRL
QILTGLTYLDELLPKLWAFICELGPQGGLRLFLECLNNDTEESKQLLAMLMLFCDCSRHL
ITILDDIEVYEEQISFKMEELVTISSFLNTFVYKMIWDGILENAKGEKLDLFHSVHGWLM
VLYERDCRRRFTPEDHWLRKDLKPSLLFQELEKGKKRAQLLLQYIPHVIPHKNRVLLFRN
IVTKEKETLGLVETSSASPHVTHITIRRSRMLEDGYDQLRRLPVNSIKGVIRVKFVNDLG
VDEAGIDQDGVFKEFLEEIIKKVFNPALNLFKTTSGNERLYPSPTSSIHENHLQLFEFVG
KMLGKAMYEGIVVDVPFASFFLSQVLGHHHSTFYSSIDELPSLDSEFYKNLTSIKRYDGD
VSDLGLTLSYDEEVMGQLVCHELIPGGKTMPVTNENKISYIHLMAHFRMHTQIKEQTAAF
IRGFRSIINPEWLHMFSTPEVQRLISGDNAEIDLDDLKKHTVYYGGFHSSHRVILWLWDI
LSSDFSPDERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFF
TIRKKEPGGRLPTSSTCFNLLKLPNYSKKSILRDKLRYAISMNTGFELS
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgttcactgctacccagacctccaagtcccagttcctggataaagccagggtagcacga
gaggaaaggaaaggtcataaggagaaagagagagctgccacacaaatccaggctctagtc
agaaaattcctctgccgttgcaggctgcaaagagaaatcaggaaagaggttgatgacttc
attgcagtcagcgatgcaggttcaacaaaaagaaatgcattgtcgatcttcaaaatcgct
agaaaattgttatttatattgagcaaagatgataaattgaggtttgagaagctatgtaga
atcatactaagtagcatggatgttgagaatgaacctaaagtgtggtatgtgtccctggct
ctttcaaaagatctcactatcccgtggctaaaacagatcaaagatgtgctctgggtctct
tgtgaatttctgaaaaaactgaagcctgacatactgcaagataataaattggtgacgctg
tacctgacaatgctgataaccttcactgatacatcgacatggaaaatcatccgagggaag
ggagaggcccttaagcctgctttaaacagaatttgtgagaacatcatgggacatctcaat
cagaagggcttctactctgttcttcagattctgcttacaaatggattggcaagatcccga
ccttccctttccaaaggaaccctcacagccatttttacactgtcactcaggcctgttatt
gctgcacatttctcagacaacctgctgaggtctttccttctccacatcatgtctgttcca
gcattcatctcgcacctcaacacgctcactccagattgtatggtcaccatgcagacccat
gaccttttccgcaagtttgtcttgtttttaagtcgagaggagcagtgtttggatatctgt
gtttgtctggagggaagccacactctgtgcttactgggtaacctaattcagctgggatat
ttcaatgtaaaagttctagagcaggaagcaggtcactttgtcaaggatctgacagatatg
ttgtcatactgtcaaagatatgtatctcaaaagaaatccaatctcacacattggcaccca
gtgttgggctggttctcccagactgttgactatggacttaatgagtctatgccgttggtg
acaaagcagttacagtgtctgtggggagttccagtgatctgcacgctcttctgtgatgtt
ctcagcaaaaagctagaaactcaagatgccacttcgcttccccctcctccgccaagctca
ttacagaataatctgcccgtcaaaaatctgtttaagcgagcgttccagaagtctgcttct
gtgcggaacatcctgaaaccggtcggagggaaacgtgtggactcggctgaggtccagaag
gtgtgcagtatttgtgtgctgtatcagacagccctcaccacactcacgcagatccgcctg
cagattctcacaggactgacttatctggatgagctgctgccgaagctgtgggcatttatc
tgtgagcttggccctcaggggggactcagactcttcctggagtgtctcaataatgacaca
gaagagtccaaacagcttctggccatgctgatgctcttctgtgactgctccagacatctc
atcacgattctggatgacatagaggtgtatgaggaacagatttcttttaaaatggaagag
cttgttaccatctcctcgttcctcaacacatttgtttacaagatgatctgggatggtatt
ttagagaatgcaaaaggagagaagctggacttattccacagcgttcacggctggctgatg
gttctatatgagcgggactgtcgcaggagattcacgcctgaagatcactggcttcgcaag
gacctgaagcccagcctgttgtttcaagagctggagaaaggcaaaaaaagagcacagctg
ctacttcagtacattcctcatgtcatcccacacaaaaatagggtgctgctgttccgaaac
attgtgacaaaagagaaggagactctaggattggtggaaacaagctccgcctctccccat
gtgactcatataactattcgccgctcacgcatgttggaggacggttatgatcaactgcgg
cgtctacctgtcaactccattaagggagtgatccgagtgaagtttgtgaatgatttaggt
gtggatgaggctggaattgaccaggatggtgtgtttaaagagttcttagaagagataatc
aagaaggttttcaacccagcgctcaatctattcaagaccaccagtgggaatgagagatta
tatccctccccaacctccagcatccatgagaaccaccttcagctgtttgaatttgttgga
aagatgcttggaaaggcaatgtacgaaggcatagtggttgacgtgccatttgcctctttt
ttcctgagtcaggttctaggtcaccatcacagcaccttctacagctccatagatgagctg
ccctctcttgactcagagttctacaaaaatctcacctccattaagcgttatgatggcgac
gtcagtgatctgggtctgactttatcctacgatgaagaggtgatggggcagttagtctgt
catgagctaattcctggtggaaagaccatgcctgtcactaatgaaaacaagatcagctac
atccacctgatggcccacttccgcatgcacacccagatcaaggagcagacggccgcattc
atcagaggcttccgcagcatcatcaacccagagtggctgcatatgttttccacccctgag
gttcagaggctcatctctggagacaacgctgagatagatctagatgatctcaagaagcac
actgtgtactatggaggtttccatagcagccacagagtcattctttggctgtgggacatt
ctctccagcgacttttcccctgatgagagagccatgttcttgaagtttgtcaccagctgc
tcaagacctcctctgcttggttttgcctacctcaaaccccctttctccatccgttgtgtg
gaagtgtcagatgatcaggacacaggcgacactttaggcagcgttctgcgtggcttcttc
acgattcgtaagaaggagccaggtggtcgcctccctacttcctccacttgtttcaacctg
ctcaagctgcccaactacagcaagaaaagcatccttagagacaaactccgctacgcaatc
agcatgaacactggctttgagctttcataa
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