Labeo rohita (rohu): 127165727
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Entry
127165727 CDS
T09007
Symbol
dcc
Name
(RefSeq) netrin receptor DCC isoform X1
KO
K06765
deleted in colorectal carcinoma
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
127165727 (dcc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lroh04515
]
127165727 (dcc)
Cell adhesion molecules [BR:
lroh04515
]
Immunoglobulin superfamily
DCC/UNC5 family
127165727 (dcc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
V-set
Fn3_VIN3
Ig_Rha78A_N
Interfer-bind
C2-set_2
fn3_SORL1
Sp38
Ig_C17orf99
Ig_4
Protocadherin
Ig_6
Fn3_SaeA_3rd
EphA2_TM
TM_ErbB1
Arylsulfotran_N
GH101_dom-5
Motif
Other DBs
NCBI-GeneID:
127165727
NCBI-ProteinID:
XP_050966561
LinkDB
All DBs
Position
5:complement(46429026..46653907)
Genome browser
AA seq
1451 aa
AA seq
DB search
MGCVTGDIHPCRLYALLIGLHVLTCVSKTHGSDPRRAFVELRFVLEPQDMVTVRGGVLQL
DCEARSDQGVPVIAWKKDGVLLSAVVDERRQQLSNGSLLVQNVLHSRHHRPDEGSYQCLA
TLEGVGAIVSRTAKVTVAGPLRVVVPTESVSAHLGDTALLRCEVTGEPMPVVRWQKNRED
LPLTFDPDSRVLVLPSGSLQVSRVQPPDSATYRCLAENPGSARTGTDADLRVIPEPGVVR
SLTFLQRPQKVTALQGRDAVLECSASGYPNPSFYWMRGNEMIQSRSKKYSLLSGSNLLIS
SVTDDDSGTYTCVAHNKQQNISASCDLSVLVPPQFLNYPSNTYAYESTDIEMECAVTGNP
QPTVRWVKNGEAVIPSDYFQIVDGGHLQILGLVRSDEGFYQCIAENEAGNSQAMAQLILL
QLVTPSSGVLPSAPRDVAPVLVSSRFVRLGWRPAEETRGTVLTYGVFYSEEGINRERSVN
VTEAESLQLTVSNLRPEATYSFRVVAYNEQGPGESSEAIRLSTQPELLVPGPVENLQAEA
ASPTSIQASWDPPAHGNGPIQSYRLLWTETSSGKEQNVEVVGQSYRMEGLKKFAEYSLRV
LAVNRHGPGLSDKDTLITTLSDVPSAPPQNISLEVVYSRSIKVSWQPPPANTQNGFITGY
KIRHRKTGRRGEQEAIEPNNLWYLFTGLEKGSQYSFQVAAMTVNGTGPSSEWHTAETPEN
DLDETQVPNQPSSLHVRPLPNSIIMSWTPPLNPNILVRGYIIGYGVGSPYAETVRVDSKQ
RYYSIENLEPSSHYVISLKAFNNAGEGVPLYESAVTRSMSDPSDPSDDDLFHLFDKFPTP
IPDTSTPMIPPVGVQAVALTSDSVRVSWADNSIPKNQKSSEVRYYSVKWKTSHSTSGKYK
SADTTALSHTVTGLKPNTMYEFSVMVTKGRKSSTWSMTAHATTYEAAPSSAPKDLTVIGR
EGRPRAILISWQPPLEANGRITGYILYYTLDKNMPIDDWVMEPIGGDRLTHQVLDLNLDT
VYYFRIQAKNAKGVGPLSEPVQYRTAKVEHPDKMANDQGRHGDSGYWPSDNNPIDMSSMN
GETQPPIGQMRPPHGSVTPQKNSNLLVIIVVSVGAVTVVVVVIVALICTRRSSAQQRKKR
ATHSAGKRKGSQKDLRPPDLWIHHEEMELKNMEKPSSSAPSGRESPIQSCQEMAPVSHSQ
SESQMGSKSSHSGADGDEASSSISTLERSLAARRATRTKMMIPMDSQPSNTPVVSAIPVP
TLDSSQYPGILPSPTCGFTTHPKFTLRPMPFSTLSVDRSYATAMSAEGAAPMAPQQPQPL
IPTAQSEPSGSEEIPSRTIPTACVRPTHPLRSFTNPLLPPPMGTIEPKVYTPMTGGSLPK
PQVKTASLGQAGKARSPLLPVSVPTAPETAEDGQKQPDDPASVYEQDDLSEQMASLEGLM
KQLNAITGSAF
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcgtcactggagatattcacccgtgcagactttacgcactcctcatcgggctg
catgttctcacctgtgtctccaaaacgcacggctcggatcctcggcgggctttcgtggag
ctgcgtttcgtgctggagccgcaggacatggtgacggttcggggcggcgttctgcagctg
gactgcgaggcgcgttcggatcagggcgttccggtcatcgcgtggaagaaggacggcgtt
ctgctgagcgcggtggtggacgagcgcaggcagcagctgtcgaacggatcgctcctcgtg
cagaacgtgctgcactcgcgacaccaccggccggacgagggatcgtaccagtgcctggcc
acgctggagggcgtcggcgccatcgtcagccgaaccgctaaagtcaccgtcgccggtcct
ctgcgcgtggtcgtccccaccgaatcggtttcggctcatctgggcgacacggctctgctg
cgctgcgaggtgacgggtgagcccatgcccgtggtgcgctggcagaagaaccgggaggac
ctgcccttgacctttgaccccgacagcagagtgctcgtcctgccgtccggatctctgcag
gtcagcagggttcagccgcccgactcggccacgtaccgctgcttagccgagaaccccggc
agcgcccgcaccggcacagacgcggacctgcgcgtgataccggagcccggagtagtgcga
tcgctgacgttcctccagaggcctcagaaggtcacggctctacagggcagagatgcggtt
ctagaatgttccgcctccggctatcccaacccatccttctactggatgagaggaaacgag
atgatccagagcagatcaaagaaatactctctcctgagcggcagcaacctgctgatcagc
agcgtcacggacgacgattcgggaacgtacacctgcgtcgctcacaacaaacagcagaac
atctctgcgtcctgcgatctctcggtgctcgtgccgcctcagttcctcaactacccgtcg
aacacgtacgcgtatgaaagcacggatatcgagatggagtgtgccgtaacgggaaacccg
caacccaccgtccgctgggtgaagaacggagaggccgtcattcccagcgactacttccag
atcgtggacggcggtcatctccagattctgggtctggttcgctccgatgagggtttctat
cagtgtatcgctgagaacgaggctggaaacagtcaggcgatggctcaactcatcctgctg
cagctcgttaccccgagctcaggcgtccttccctccgctccccgtgacgtggcccccgtc
ctcgtgtccagccgcttcgtgcgcctcggctggcgccccgcggaggagacgcgcgggacc
gtcctgacgtacggcgtcttctactccgaggagggaatcaacagagagcgcagcgtcaat
gtgacggaggccgagagtttgcagctgacggtcagtaatctgcgaccggaggccacgtac
tcgttcagggtggtggcgtataacgagcagggacccggagagagttcagaggccatacga
ctgtccactcaacccgagcttctggttcccggtccagtggagaacctgcaggcagaagca
gcgtctccgacgtccatccaggcgtcctgggatcctccggcccacggcaacggccccatc
cagagctaccggctgctgtggaccgagacctccagcggaaaagagcagaacgtggaggtc
gtgggtcagagctacaggatggagggactgaagaagttcgccgagtattcgttacgagtg
ctggcggtcaatcggcacggacccggcctctccgataaagacacgctcatcaccacgctc
tcagacgtgcccagcgctccaccgcagaacatctcactggaggtcgtctactcgcggagc
attaaggtgagctggcagccgccgcctgcaaacacacagaacggattcatcaccggatac
aagatccgccatcgcaaaacgggccgacggggggaacaggaagccatcgaacccaacaac
ctgtggtacctgttcaccggattggagaaaggcagccagtacagcttccaggtggcagcc
atgacggtcaatggcacggggcccagcagcgaatggcacacggccgagacgccggagaac
gacctggacgaaactcaagttcctaaccagccgagctctctgcacgtgcgtccgctgccc
aacagcatcatcatgagctggacgccgcccctcaaccccaacatcctggtgcgcggctac
atcatcggctacggagtgggcagcccgtacgcagagaccgtgagagtggacagcaagcag
cgctactactccatcgagaacttggagcccagctctcattacgtcatctctctgaaggcc
ttcaataacgcgggcgaaggagttcctctgtacgagagcgctgtcaccagatccatgtca
gacccctcggacccgtccgatgacgatctgttccatctgtttgataaattccctaccccc
atcccagatacgtccacgcccatgattcctcccgtaggtgtgcaggccgtggcgctcacg
tccgactcggtgcgcgtcagctgggccgataactccattcccaagaaccagaagtcctcg
gaggtgcgctactactccgtcaagtggaagaccagccactccaccagcggcaaatacaag
tcggccgacactacagctctcagtcacaccgtcacgggtctgaagcccaacaccatgtac
gagttctcagtcatggtgaccaaaggacgcaagtccagcacatggagtatgacggcacac
gccaccacatatgaagcagcaccgagctccgcccctaaggacctgactgtgattggccga
gagggacgtccacgagccattctgattagctggcagccgccgctggaggccaacggacga
atcacaggttatatcctgtactacacgctggacaagaacatgcccatcgacgactgggtg
atggagcccatcggcggagaccggctcacgcaccaggtcctggacctcaacctggacacc
gtctactacttccgcatccaggccaagaacgccaaaggagtggggccgctgtcggagccc
gtgcagtacaggacggccaaagttgagcatccggacaagatggccaatgatcaaggtcgt
catggagacagcggttactggccttctgacaataaccccattgacatgagcagcatgaac
ggtgagacgcagcctcccatcggtcagatgcggccgccgcacggcagcgtgacgccgcag
aagaacagcaatctgctggtcatcatcgttgtttccgtgggagccgttaccgtggtagtg
gtggtgatcgtcgccctgatttgcacccgccgctcctccgcacagcagaggaagaaacgt
gcgacacacagcgccgggaagcggaagggcagccagaaagacctccgacctcctgacctc
tggatccaccatgaggagatggagctgaagaacatggagaagccctcgagctccgccccc
tccggccgcgagtcgcccatccagagctgccaggagatggcgccggtcagccacagccaa
tcggagagccagatgggcagcaagagcagccactcaggtgccgacggggacgaggcctcc
agcagcatttccacgttggagcgatcgttagccgcccgcagggccacgcgcaccaagatg
atgattcccatggactctcagcccagcaacacaccggtggtcagtgccatcccggtgccc
acactggacagcagtcagtatccgggtatcctgccgtcgcccacctgcgggttcacaaca
caccccaaattcaccctgcggcccatgccgttctccacgctgagtgtcgaccgcagttac
gctacagcgatgtcagcggagggcgccgctccaatggccccgcagcaaccgcagcctctg
attcccacggcgcagtcggagccgtcggggtcggaagagattcccagccgcaccatcccg
accgcctgcgtgcggcccacgcatcccctgcgcagcttcaccaacccgctcctgcctccg
cccatgggcaccatcgagcccaaggtctacacgcccatgacaggtggaagtttacccaaa
ccgcaggtgaagacggcctcgttgggtcaggccgggaaggcgcgctctccgttactgccc
gtttcagtgccgacggctcccgagacggccgaagacggacagaaacagcccgacgacccg
gccagcgtgtacgagcaggacgatctgagcgagcagatggccagtctggaaggtctgatg
aagcagctcaacgccatcacgggttcggccttttaa
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